Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe11g00275 ATGAATGGTAATGATGCGGAGCCGTTGGTGTACGTGCACGGCGATCTCGATTTGAAGATCATTGAGGCGCGGCGTTTGCCTAATATGGATTTGCTAACGGAGCGTATTCGGCGGTTTTTTACTGTTTTTAGTTCTTGTCGGAAACCGTTTTCCAAGAACGATGAGGATGAACACAAGCCTCACCGGAAGATTATTACTAGTGATCCTTACGTCACCGTTTGTCTTGCGGGAGCGACGGTTGCTCGGACGCGAGTTATTTCGAACTCGCAGAACCCTATCTGGAACGAGCACTTCAAAATATCTCTTGCTCATCCGGTCTCGCAGGTGGAGTTTCATGTGAAGGATAACGATGTGTTTGGTGCGGATTTGATTGGCATTGCGACGGTCCCTGCGCGCAGAGTTCTTTCTGGCGAAGTCATTGATGATTGGTTTCCGATTATCGGTTCGTTTGGGAAACCGCCGAAGCCGGATTCGGCTGTACGCTTGGAAATGAAATTCACGAAGTGCGAGGACAATCCTCTGTACCGTCAAGGCATTGCAGCCGATCCCGAACATTTTGGCGTTCGGAATTGCTATTTCCCGGTACGCCATGGGGGTTCGGTAACGCTTTATCAGGACGCGCACGTTCCCGATAACATGTTGGAGGAGATTGAATTGGAAAAGGGGAATTTGTATCAGCATGGGAATTGCTGGGAGGATATATGCCATGCCATTTTGGAGGCTCACCATTTAGTCTACATCGCTGGTTGGTCCATATATCATAAGGTTAAGCTTGTGAGAGAGCCTTCAAAGCCGTTGCCTAATGGTGGGGATTTGAACTTGGGAGAGTTGCTCAAGTACAAGTCTCAAGAAGGGGTGCGAGTCTTGTTATTGGTTTGGGATGACAAGACTTCCCACAGCAAGTTCTTCATTAACACGACTGGAGTGATGCAGACGCATGATGAGGAGACCCGGAAGTTCTTCAAGCACTCTTCTGTGTCATGTGTGCTGTCACCCCGATATGCCAGCAGTAAGCTTAGCATTTTTAAGCAACAGGCACGCTTTATACCATGGTTCATTTATCTCATGCTTCAGGTTGTTGGAACGCTTTTCACCCATCACCAGAAGTGCGTGATTGTGGATACACAAGCATCCGGAAATTACCGGAAGATAAGTTCTTTTATTGGAGGACTTGACCTTTGCGATGGTCGTTACGATACTCCCGAGCATCGGTTGTTAAAAGATCTTGACACTGTATTTGAGGATGATTATCATAATCCAACTTTTTCCGGAGGTGCAAAGGGTCCTCGGCAGCCATGGCATGATTTACATTGCAAAATTGAAGGGCCTGCGGCATATGACGTGCTTACTAACTTTGAACAACGATGGCGAAAAGCCACTAAATGGTCTGAATTAGGTCAGCGATTCAAAAGAGTATCACATTGGCATGAAGATGCTTTAATAAAGTTGGAACGTATATCTTGGATACTCAGTCCATCTCAGTCAGTCCCTAACGACGATCCATTGTTATGGGTTTCCGAGGAAAATGATCCCAACAATTGGCATGTTCAGGTTTTCCGGTCCATAGATTCAGGATCTTTGAGAGGATTTCCCAAAGATGTTTTTCAAGCCGAGTTGCAGAATCTGGTTTGTGCAAAAAATTTGGTTATTGACAAAAGCATTCAAACAGCATATATTCAAGCCATAAGATCTGCCCAACACTTCATATACATTGAGAATCAGTATTTTCTAGGATCGTCGTTTGCGTGGCCTGCGTACAAAGAAGCAGGTGCTGATAATCTTATTCCTATGGAGTTGGCATTGAAGATTGCTAGTAAGATAAGAGCCAATGAGAGGTTTGCTGTATACATTGTGATACCAATGTGGCCTGAAGGGGCTCCCAGTTCTGTTTCTGTTCAAGAAATATTGTTCTGGCAGGGCCAGACAATCCAAATGATGTATGAAATCATTGGACGAGAGTTGAAATATAAGAATCTCGAGAACGCTCATCCCTCAGACTACTTGAACTTTTACTGTCTCGGCAATAGGGAACCGCACAACGACTTATCATGCTCCTCTACTCATTCTCTCAAGAGTGAAGATTTGACTTCAGACTCGCAAAAGTTCCGAAGATTCATGATATACGTGCATGCGAAGGGAATGATTGTCGACGACGAGTATGTAATAGTAGGATCTGCTAACATAAATCAAAGATCAATGGCTGGTTCAAGGGACACTGAGATTGCCATGGGTGCATATCAACCCAATAACACATGGGTTAAGAGGAAACGACAACCACGAGGCCAGGTTTATGGCTATAGAATGTCGCTGTGGGCCGAACATTTAGGAAACATCGACAGTTGCTTCAAGGAGCCAGAAAGTTTGGTTTGTGTGAAAGCAGTGAACAAGATAGCTGAAGATAACTGGAAGAAATACACAGCAGAGGAGTTTAAGCCATTGCAAGGACACCTCCTGAAGTACCCGATTGATGTGAGCCAAAGTGGGAAGGTTGGGCCGTTGAGTGGACACGAGACATTCCCTGACTTTGGTGGTAAGGTCCTTGGGGCTCGATCTAACCTCCCTGATGCTCTTACTACATAA 2580 45.31 MNGNDAEPLVYVHGDLDLKIIEARRLPNMDLLTERIRRFFTVFSSCRKPFSKNDEDEHKPHRKIITSDPYVTVCLAGATVARTRVISNSQNPIWNEHFKISLAHPVSQVEFHVKDNDVFGADLIGIATVPARRVLSGEVIDDWFPIIGSFGKPPKPDSAVRLEMKFTKCEDNPLYRQGIAADPEHFGVRNCYFPVRHGGSVTLYQDAHVPDNMLEEIELEKGNLYQHGNCWEDICHAILEAHHLVYIAGWSIYHKVKLVREPSKPLPNGGDLNLGELLKYKSQEGVRVLLLVWDDKTSHSKFFINTTGVMQTHDEETRKFFKHSSVSCVLSPRYASSKLSIFKQQARFIPWFIYLMLQVVGTLFTHHQKCVIVDTQASGNYRKISSFIGGLDLCDGRYDTPEHRLLKDLDTVFEDDYHNPTFSGGAKGPRQPWHDLHCKIEGPAAYDVLTNFEQRWRKATKWSELGQRFKRVSHWHEDALIKLERISWILSPSQSVPNDDPLLWVSEENDPNNWHVQVFRSIDSGSLRGFPKDVFQAELQNLVCAKNLVIDKSIQTAYIQAIRSAQHFIYIENQYFLGSSFAWPAYKEAGADNLIPMELALKIASKIRANERFAVYIVIPMWPEGAPSSVSVQEILFWQGQTIQMMYEIIGRELKYKNLENAHPSDYLNFYCLGNREPHNDLSCSSTHSLKSEDLTSDSQKFRRFMIYVHAKGMIVDDEYVIVGSANINQRSMAGSRDTEIAMGAYQPNNTWVKRKRQPRGQVYGYRMSLWAEHLGNIDSCFKEPESLVCVKAVNKIAEDNWKKYTAEEFKPLQGHLLKYPIDVSQSGKVGPLSGHETFPDFGGKVLGARSNLPDALTT 859
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1476758 1483969 + Cp4.1LG11g02590.1 Cpe11g00275 477069
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe11g00275 859 SMART pld_4 705 732 IPR001736 GO:0003824
Cpe11g00275 859 SMART pld_4 362 397 IPR001736 GO:0003824
Cpe11g00275 859 PANTHER PHOSPHOLIPASE D 8 858 IPR015679 -
Cpe11g00275 859 SUPERFAMILY Phospholipase D/nuclease 193 468 - -
Cpe11g00275 859 SMART C2_3c 15 143 IPR000008 -
Cpe11g00275 859 PIRSF PLD_plant 1 859 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Cpe11g00275 859 Gene3D Endonuclease Chain A 534 753 - -
Cpe11g00275 859 Gene3D Endonuclease Chain A 216 480 - -
Cpe11g00275 859 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 13 168 IPR035892 -
Cpe11g00275 859 CDD C2_plant_PLD 10 167 - -
Cpe11g00275 859 Pfam PLD-like domain 559 741 IPR025202 -
Cpe11g00275 859 PANTHER PHOSPHOLIPASE D 8 858 - -
Cpe11g00275 859 SUPERFAMILY Phospholipase D/nuclease 551 787 - -
Cpe11g00275 859 Gene3D C2 domain 12 175 IPR035892 -
Cpe11g00275 859 ProSiteProfiles C2 domain profile. 1 144 IPR000008 -
Cpe11g00275 859 Pfam Phospholipase D C terminal 779 849 IPR024632 -
Cpe11g00275 859 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 362 397 IPR001736 GO:0003824
Cpe11g00275 859 Pfam C2 domain 14 146 IPR000008 -
Cpe11g00275 859 Pfam Phospholipase D Active site motif 363 397 IPR001736 GO:0003824
Cpe11g00275 859 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 705 732 IPR001736 GO:0003824
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe11g00275 Cpe-Chr11:1476758 Cpe12g00003 Cpe-Chr12:10623 0 dispersed
Cpe02g01720 Cpe-Chr2:14089946 Cpe11g00275 Cpe-Chr11:1476758 3.65E-179 transposed
Cpe11g00328 Cpe-Chr11:1747964 Cpe11g00275 Cpe-Chr11:1476758 0 transposed
Cpe10g00694 Cpe-Chr10:3992957 Cpe11g00275 Cpe-Chr11:1476758 0 wgd
Cpe11g00275 Cpe-Chr11:1476758 Cpe19g00883 Cpe-Chr19:6467980 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe11g00275 K01115 - csv:101213442 1643.25