Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe11g00311 ATGGCTTTTCGCAACCAACTCTCTCAGGACCTTCCTCTTCATTATGAGAACCAGTCTCAACCGGAACGGCCGCTTTCTGATAACACGCTGCGCTCGATTTTGTCTGATCAACTGGCTGACCATTCTCCGGCCGATGATGGTTCTAAGCCTGAACATCCGCTTCAGAGCACTCCGAATTGGCTGAATAGTGCGCTACTTCGGAATCAAGCACCTCATTCTCACTTTTCTGATGAGACCACGGCGACCGCTGCGGATAACGTTGACACCGACTTCCTTAATCTTCATACGACTGCTGCCAATTCTGCTGTCTCTCATCCGTCGGGTCAATGGCTCTCCCGCGCGATCCTCCATCGCGATCATAGCGATGTTTTAGATGAAGTCGCCGATGCTGCCGATGCTATGATTGGTGCTACCACTTTGTCGCGCGAATCGGATGATTTGAAGAATAACAGCAGCGGCGGGGATGGGGAGGGTGTGAATAACAGCGACGATGTGGCGGTTGAGAGCGATGGTAATGAAGGTGCGTATGGTGGAGATGCGGCGACGAATTGGCAGAATGCGCGGTTTAAGGCGGAAATTCTGGCGCATCCTCTTTACGAGCAGCTACTCTCTGCTCACGTCGCCTGCCTCCGGATCGCAACGCCAGTGGACCAGTTGCCGAGAGTAGATTCTCAGCTTGCTCGGTCTCAGAATGTGGCGGCGAAATACTCGTCGTTTGGTCACCGTTCTCAGCCCATAGCCGGCAATGGAAAAGAGCTTGATCAGTTCATGACGCATTATGTTCTATTACTTTGCTCTTTTAAAGAACAACTCCAGCAACATGTTCGTGTTCATGCCATGGAAGCAGTGTATGCCTGCTGGGAAATTGAACAATCTTTGCAAAGCTTGACAGGTGTTTCACCAGGTGAAGGTACTGGTGCTACAATGTCTGATGATGACGAAGACCAGATAGATAGCGATGCTAATTTGTTTGATGGAAGTTTTGAGGGTCATGATGCTATGGGATTTGGTCCTCTTATCCCAACCGATAGTGAGAGATCCCTTATGGAAAGGGTGAGGCACGAATTGAAGCATGAACTAAAGAATGGATACAAAGAGAAAATTTTAGATATCAGGGAGGAGATTTTGCGAAAAAGGAGAGCAGGTAAGCTTCCTGGTGACACCACGTCCGTCTTGAAAGCTTGGTGGCAATCACATTCAAATTGGCCATATCCAACTGAGGAAGATAAAGCAAAGTTGGTTCAAGAAACTGGGCTGCAACTGAAGCAGATAAACAACTGGTTTATTAACCAGAGGAAGAGGAATTGGCACACGAATCCTTCAACCTCAACAACCTTGAAGACTAAACGCAAAAGTTCCCAATCCGATCGGAGAGGCAAACGGCTGCCGGAATCCATGGCGTCCACCTCCGCCTTCTTCTTATTCTCCGATCCCTTCGTCAAAAGTCAGAGCGTAACTCCTCGGATCGTACTGAAACCTCACACTCCGTCTCTTGTTAACTATGACATTGGGAAGAAATGA 1521 48.65 MAFRNQLSQDLPLHYENQSQPERPLSDNTLRSILSDQLADHSPADDGSKPEHPLQSTPNWLNSALLRNQAPHSHFSDETTATAADNVDTDFLNLHTTAANSAVSHPSGQWLSRAILHRDHSDVLDEVADAADAMIGATTLSRESDDLKNNSSGGDGEGVNNSDDVAVESDGNEGAYGGDAATNWQNARFKAEILAHPLYEQLLSAHVACLRIATPVDQLPRVDSQLARSQNVAAKYSSFGHRSQPIAGNGKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVYACWEIEQSLQSLTGVSPGEGTGATMSDDDEDQIDSDANLFDGSFEGHDAMGFGPLIPTDSERSLMERVRHELKHELKNGYKEKILDIREEILRKRRAGKLPGDTTSVLKAWWQSHSNWPYPTEEDKAKLVQETGLQLKQINNWFINQRKRNWHTNPSTSTTLKTKRKSSQSDRRGKRLPESMASTSAFFLFSDPFVKSQSVTPRIVLKPHTPSLVNYDIGKK 506
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1683405 1688902 + Cp4.1LG11g03190.1 Cpe11g00311 477105

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cpe11g00311 506 Pfam KNOX2 domain 248 297 IPR005541 GO:0003677|GO:0005634
Cpe11g00311 506 SMART ELK_2 355 376 IPR005539 GO:0003677
Cpe11g00311 506 MobiDBLite consensus disorder prediction 432 449 - -
Cpe11g00311 506 SMART HOX_1 377 442 IPR001356 GO:0003677
Cpe11g00311 506 Pfam KNOX1 domain 190 229 IPR005540 GO:0003677|GO:0005634
Cpe11g00311 506 SUPERFAMILY Homeodomain-like 377 441 IPR009057 -
Cpe11g00311 506 SMART KNOX1_2 187 231 IPR005540 GO:0003677|GO:0005634
Cpe11g00311 506 Gene3D - 376 437 - -
Cpe11g00311 506 PANTHER CLASS II KNOTTED-LIKE HOMEOBOX PROTEIN 45 453 - -
Cpe11g00311 506 CDD homeodomain 378 439 IPR001356 GO:0003677
Cpe11g00311 506 MobiDBLite consensus disorder prediction 432 463 - -
Cpe11g00311 506 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 45 453 - -
Cpe11g00311 506 MobiDBLite consensus disorder prediction 142 158 - -
Cpe11g00311 506 MobiDBLite consensus disorder prediction 39 58 - -
Cpe11g00311 506 MobiDBLite consensus disorder prediction 1 26 - -
Cpe11g00311 506 MobiDBLite consensus disorder prediction 142 178 - -
Cpe11g00311 506 ProSiteProfiles 'Homeobox' domain profile. 375 438 IPR001356 GO:0003677
Cpe11g00311 506 Pfam Homeobox KN domain 395 434 IPR008422 GO:0003677|GO:0006355
Cpe11g00311 506 SMART KNOX2_2 243 298 IPR005541 GO:0003677|GO:0005634
Cpe11g00311 506 ProSiteProfiles ELK domain profile. 355 375 IPR005539 GO:0003677
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe11g00311 - - - csv:101213817 769.615
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g00470 Cpe-Chr2:2662202 Cpe11g00311 Cpe-Chr11:1683405 0 dispersed
Cpe05g00298 Cpe-Chr5:1677903 Cpe11g00311 Cpe-Chr11:1683405 1.58E-43 dispersed
Cpe11g00311 Cpe-Chr11:1683405 Cpe13g00185 Cpe-Chr13:1447129 6.17E-98 dispersed
Cpe11g00311 Cpe-Chr11:1683405 Cpe06g00313 Cpe-Chr6:1740266 0 wgd
Cpe11g00311 Cpe-Chr11:1683405 Cpe07g00308 Cpe-Chr7:1998675 0 wgd
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cpe09g00102 CCT,ECH 43 526 Homeobox Transcription Factor Family AT4G00730 55.9 1.5e-133 473.8
Cpe04g00733 CCT,CST,ECH 95 251 Homeobox Transcription Factor Family AT4G00730 53.4 3.0e-44 177.2
Cpe11g00080 CCT 310 639 Homeobox Transcription Factor Family AT4G32980 51.2 7.6e-78 288.5
Cpe03g00557 CCT,CST 1 286 Homeobox Transcription Factor Family AT3G01470 53.3 1.4e-60 230.3
Cpe04g00557 . 1 293 Homeobox Transcription Factor Family AT3G01470 52.2 5.2e-55 211.8
Cpe01g02355 CCT 66 268 Homeobox Transcription Factor Family AT3G01470 53.4 7.6e-38 154.8
Cpe02g01683 . 209 458 Homeobox Transcription Factor Family AT1G79840 59.2 6.1e-76 282.7
Cpe09g00164 CST 4 298 Homeobox Transcription Factor Family AT1G69780 65.8 9.9e-84 307.4
Cpe01g01454 CST 4 305 Homeobox Transcription Factor Family AT1G69780 70.8 1.7e-83 306.6
Cpe19g01171 CCT,CST 4 707 Homeobox Transcription Factor Family AT2G34710 67.8 0.0e+00 1110.9
Cpe10g00053 CCT 7 661 Homeobox Transcription Factor Family AT2G34710 64.7 3.0e-298 1021.5
Cpe20g00561 CCT,CST 2 642 Homeobox Transcription Factor Family AT2G34710 62.9 2.9e-285 978.4
Cpe16g00533 . 20 703 Homeobox Transcription Factor Family AT2G34710 59.5 1.2e-267 919.8
Cpe05g00818 . 20 647 Homeobox Transcription Factor Family AT2G34710 54.4 1.0e-234 810.4
Cpe17g00535 . 49 571 Homeobox Transcription Factor Family AT2G34710 68.9 1.7e-208 723.4
Cpe02g00509 CCT,ECH 14 527 Homeobox Transcription Factor Family AT2G34710 70.4 6.4e-208 721.5
Cpe06g00492 CCT,ECH 1 525 Homeobox Transcription Factor Family AT2G34710 68.6 1.5e-204 710.3
Cpe12g00658 . 3 576 Homeobox Transcription Factor Family AT2G34710 63.0 6.8e-202 701.4
Cpe06g00487 . 1 518 Homeobox Transcription Factor Family AT2G34710 68.1 2.0e-201 699.9
Cpe07g00669 . 10 529 Homeobox Transcription Factor Family AT2G34710 66.2 5.8e-201 698.4
Cpe17g00535 . 47 571 Homeobox Transcription Factor Family AT1G52150 85.8 1.3e-260 896.3
Cpe12g00658 . 1 576 Homeobox Transcription Factor Family AT1G52150 78.5 1.7e-255 879.4
Cpe02g00509 CCT,ECH 7 526 Homeobox Transcription Factor Family AT1G52150 80.3 1.8e-241 832.8
Cpe06g00492 CCT,ECH 7 525 Homeobox Transcription Factor Family AT1G52150 80.4 1.2e-240 830.1
Cpe19g01171 CCT,CST 7 664 Homeobox Transcription Factor Family AT1G52150 56.6 1.0e-236 817.0
Cpe06g00487 . 7 517 Homeobox Transcription Factor Family AT1G52150 80.1 1.1e-235 813.5
Cpe10g00053 CCT 9 613 Homeobox Transcription Factor Family AT1G52150 68.2 7.7e-232 800.8
Cpe20g00561 CCT,CST 8 592 Homeobox Transcription Factor Family AT1G52150 70.1 6.5e-231 797.7
Cpe16g00533 . 24 654 Homeobox Transcription Factor Family AT1G52150 56.5 8.2e-226 780.8
Cpe05g00818 . 24 555 Homeobox Transcription Factor Family AT1G52150 67.3 5.4e-201 698.4
Cpe07g00669 . 20 523 Homeobox Transcription Factor Family AT1G52150 65.7 1.6e-184 643.7
Cpe14g00930 . 7 280 Homeobox Transcription Factor Family AT4G16780 60.0 1.9e-79 293.1
Cpe03g01822 CCT,CST 6 275 Homeobox Transcription Factor Family AT4G16780 56.9 6.7e-69 258.1
Cpe08g00728 . 2 267 Homeobox Transcription Factor Family AT4G16780 52.9 1.8e-66 250.0
Cpe08g00624 CCT,CST 6 279 Homeobox Transcription Factor Family AT4G16780 56.1 5.3e-66 248.4
Cpe19g00701 . 63 220 Homeobox Transcription Factor Family AT4G16780 66.7 5.9e-49 191.8
Cpe03g00363 . 117 290 Homeobox Transcription Factor Family AT4G16780 61.4 3.8e-48 189.1
Cpe17g00660 . 154 277 Homeobox Transcription Factor Family AT4G16780 76.8 2.5e-47 186.4
Cpe12g00802 . 153 276 Homeobox Transcription Factor Family AT4G16780 76.0 4.2e-47 185.7
Cpe10g00508 . 73 228 Homeobox Transcription Factor Family AT4G16780 65.6 1.2e-46 184.1
Cpe01g00772 . 119 240 Homeobox Transcription Factor Family AT4G16780 76.4 2.1e-46 183.3
Cpe02g01596 . 80 208 Homeobox Transcription Factor Family AT4G16780 66.2 5.9e-41 165.2
Cpe04g01341 . 73 192 Homeobox Transcription Factor Family AT4G16780 67.5 1.4e-39 160.6
Cpe08g00624 CCT,CST 40 277 Homeobox Transcription Factor Family AT2G44910 63.0 7.7e-66 248.1
Cpe03g01822 CCT,CST 40 277 Homeobox Transcription Factor Family AT2G44910 64.5 1.0e-65 247.7
Cpe14g00930 . 19 243 Homeobox Transcription Factor Family AT2G44910 58.7 1.2e-63 240.7
Cpe08g00728 . 62 229 Homeobox Transcription Factor Family AT2G44910 63.6 2.5e-56 216.5
Cpe17g00660 . 162 285 Homeobox Transcription Factor Family AT2G44910 80.8 2.3e-49 193.4
Cpe12g00802 . 110 280 Homeobox Transcription Factor Family AT2G44910 62.3 5.0e-49 192.2
Cpe19g00701 . 63 227 Homeobox Transcription Factor Family AT2G44910 61.4 9.5e-48 188.0
Cpe10g00508 . 73 239 Homeobox Transcription Factor Family AT2G44910 60.7 2.3e-46 183.3
Cpe03g00363 . 118 295 Homeobox Transcription Factor Family AT2G44910 55.8 3.4e-45 179.5
Cpe01g00772 . 99 240 Homeobox Transcription Factor Family AT2G44910 62.6 4.9e-44 175.6
Cpe02g01596 . 91 207 Homeobox Transcription Factor Family AT2G44910 70.3 3.8e-41 166.0
Cpe04g01341 . 73 198 Homeobox Transcription Factor Family AT2G44910 65.9 1.2e-39 161.0
Cpe19g01171 CCT,CST 14 707 Homeobox Transcription Factor Family AT4G32880 56.5 5.0e-258 887.9
Cpe02g00509 CCT,ECH 14 526 Homeobox Transcription Factor Family AT4G32880 83.5 3.7e-253 871.7
Cpe17g00535 . 55 571 Homeobox Transcription Factor Family AT4G32880 81.9 5.9e-251 864.4
Cpe06g00492 CCT,ECH 18 525 Homeobox Transcription Factor Family AT4G32880 83.1 7.8e-251 864.0
Cpe16g00533 . 14 703 Homeobox Transcription Factor Family AT4G32880 56.5 2.8e-248 855.5
Cpe06g00487 . 18 515 Homeobox Transcription Factor Family AT4G32880 83.2 5.7e-246 847.8
Cpe12g00658 . 9 576 Homeobox Transcription Factor Family AT4G32880 74.4 5.4e-244 841.3
Cpe10g00053 CCT 9 661 Homeobox Transcription Factor Family AT4G32880 52.2 3.3e-233 805.4
Cpe20g00561 CCT,CST 8 594 Homeobox Transcription Factor Family AT4G32880 68.3 7.3e-233 804.3
Cpe05g00818 . 14 647 Homeobox Transcription Factor Family AT4G32880 50.1 6.6e-210 728.0
Cpe07g00669 . 14 523 Homeobox Transcription Factor Family AT4G32880 63.6 1.2e-187 654.1
Cpe19g01171 CCT,CST 7 707 Homeobox Transcription Factor Family AT1G30490 68.2 0.0e+00 1096.6
Cpe10g00053 CCT 7 661 Homeobox Transcription Factor Family AT1G30490 64.5 1.5e-294 1009.2
Cpe20g00561 CCT,CST 2 594 Homeobox Transcription Factor Family AT1G30490 80.9 4.4e-278 954.5
Cpe16g00533 . 5 703 Homeobox Transcription Factor Family AT1G30490 56.9 2.5e-257 885.6
Cpe05g00818 . 5 647 Homeobox Transcription Factor Family AT1G30490 51.7 8.7e-226 780.8
Cpe17g00535 . 48 571 Homeobox Transcription Factor Family AT1G30490 67.3 3.3e-201 699.1
Cpe07g00669 . 8 535 Homeobox Transcription Factor Family AT1G30490 65.3 2.8e-200 696.0
Cpe02g00509 CCT,ECH 15 526 Homeobox Transcription Factor Family AT1G30490 68.6 1.5e-198 690.3
Cpe06g00492 CCT,ECH 19 525 Homeobox Transcription Factor Family AT1G30490 68.3 9.4e-196 681.0
Cpe12g00658 . 2 576 Homeobox Transcription Factor Family AT1G30490 61.3 1.1e-193 674.1
Cpe06g00487 . 19 518 Homeobox Transcription Factor Family AT1G30490 67.8 1.3e-192 670.6
Cpe20g00379 CCT,CST 7 727 Homeobox Transcription Factor Family AT4G21750 66.4 1.6e-282 969.1
Cpe15g00750 CCT,CST,ECH 89 679 Homeobox Transcription Factor Family AT4G21750 65.3 6.0e-242 834.3
Cpe19g00972 CCT,CST 1 585 Homeobox Transcription Factor Family AT4G21750 55.5 4.2e-203 705.3
Cpe05g01445 CCT,CST,ECH 54 512 Homeobox Transcription Factor Family AT4G21750 61.5 7.0e-182 634.8
Cpe04g00733 CCT,CST,ECH 95 499 Homeobox Transcription Factor Family AT4G21750 74.8 1.2e-178 624.0
Cpe12g00015 CCT,CST,ECH 1 309 Homeobox Transcription Factor Family AT4G21750 62.8 1.3e-103 374.8
Cpe03g01710 CCT,ECH 30 344 Homeobox Transcription Factor Family AT4G21750 51.4 6.1e-85 312.8
Cpe17g00350 CCT,CST,ECH 1 271 Homeobox Transcription Factor Family AT4G21750 62.4 1.0e-84 312.0
Cpe02g01091 . 71 376 Homeobox Transcription Factor Family AT4G21750 51.8 1.7e-82 304.7
Cpe14g00118 CCT,ECH 30 331 Homeobox Transcription Factor Family AT4G21750 50.6 3.5e-80 297.0
Cpe05g01122 . 266 532 Homeobox Transcription Factor Family AT5G41410 60.4 6.2e-64 242.7
Cpe08g00966 CCT 254 454 Homeobox Transcription Factor Family AT5G41410 54.6 2.9e-61 233.8
Cpe10g00394 . 235 479 Homeobox Transcription Factor Family AT5G41410 54.1 1.2e-59 228.4
Cpe16g00265 CCT,CST 276 475 Homeobox Transcription Factor Family AT5G41410 54.9 1.0e-58 225.3
Cpe05g00449 . 242 442 Homeobox Transcription Factor Family AT5G41410 52.2 2.5e-57 220.7
Cpe19g00580 . 323 495 Homeobox Transcription Factor Family AT5G41410 60.6 6.2e-56 216.1
Cpe17g00578 . 213 421 Homeobox Transcription Factor Family AT5G41410 51.6 4.2e-52 203.4
Cpe12g00736 . 286 484 Homeobox Transcription Factor Family AT5G41410 52.2 1.6e-51 201.4
Cpe10g00394 . 225 453 Homeobox Transcription Factor Family AT4G36870 69.0 1.6e-82 304.3
Cpe13g00140 CCT 112 331 Homeobox Transcription Factor Family AT4G36870 52.3 1.1e-62 238.4
Cpe05g00355 CCT 173 405 Homeobox Transcription Factor Family AT4G36870 50.6 1.1e-56 218.4
Cpe20g00740 . 206 349 Homeobox Transcription Factor Family AT4G36870 52.0 1.7e-36 151.4
Cpe03g00311 CCT 172 412 Homeobox Transcription Factor Family AT1G75410 51.0 6.6e-54 208.8
Cpe05g00449 . 186 414 Homeobox Transcription Factor Family AT1G75410 53.0 5.6e-53 205.7
Cpe08g00966 CCT 186 426 Homeobox Transcription Factor Family AT1G75410 50.6 2.1e-52 203.8
Cpe05g01122 . 329 507 Homeobox Transcription Factor Family AT1G75410 55.6 1.1e-45 181.4
Cpe05g01122 . 257 680 Homeobox Transcription Factor Family AT2G23760 62.3 3.5e-100 363.2
Cpe10g00394 . 226 615 Homeobox Transcription Factor Family AT2G23760 54.1 4.4e-95 346.3
Cpe19g00580 . 266 634 Homeobox Transcription Factor Family AT2G23760 50.8 3.2e-85 313.5
Cpe05g01122 . 329 530 Homeobox Transcription Factor Family AT1G19700 58.5 6.9e-59 225.7
Cpe20g00740 . 206 371 Homeobox Transcription Factor Family AT1G19700 51.5 2.2e-44 177.6
Cpe19g00315 . 104 328 Homeobox Transcription Factor Family AT5G02030 51.7 1.4e-65 248.1
Cpe14g00930 . 1 280 Homeobox Transcription Factor Family AT4G17460 55.1 7.1e-71 264.6
Cpe08g00728 . 1 267 Homeobox Transcription Factor Family AT4G17460 52.1 7.8e-62 234.6
Cpe03g01822 CCT,CST 1 274 Homeobox Transcription Factor Family AT4G17460 52.8 3.6e-59 225.7
Cpe08g00624 CCT,CST 6 277 Homeobox Transcription Factor Family AT4G17460 52.5 3.6e-59 225.7
Cpe19g00701 . 1 241 Homeobox Transcription Factor Family AT4G17460 51.3 3.5e-46 182.6
Cpe12g00802 . 69 288 Homeobox Transcription Factor Family AT4G17460 50.2 4.6e-46 182.2
Cpe17g00660 . 66 276 Homeobox Transcription Factor Family AT4G17460 53.4 7.9e-46 181.4
Cpe10g00508 . 73 232 Homeobox Transcription Factor Family AT4G17460 62.8 1.8e-42 170.2
Cpe01g00772 . 106 242 Homeobox Transcription Factor Family AT4G17460 65.2 4.9e-40 162.2
Cpe02g01596 . 76 207 Homeobox Transcription Factor Family AT4G17460 61.8 7.9e-38 154.8
Cpe14g00930 . 1 280 Homeobox Transcription Factor Family AT5G47370 57.8 1.4e-71 266.9
Cpe08g00728 . 1 267 Homeobox Transcription Factor Family AT5G47370 52.4 5.4e-63 238.4
Cpe03g01822 CCT,CST 1 276 Homeobox Transcription Factor Family AT5G47370 54.4 7.3e-60 228.0
Cpe08g00624 CCT,CST 6 271 Homeobox Transcription Factor Family AT5G47370 54.7 8.1e-59 224.6
Cpe12g00802 . 72 282 Homeobox Transcription Factor Family AT5G47370 53.5 1.3e-48 190.7
Cpe17g00660 . 69 276 Homeobox Transcription Factor Family AT5G47370 54.0 3.2e-47 186.0
Cpe19g00701 . 63 226 Homeobox Transcription Factor Family AT5G47370 60.2 3.0e-45 179.5
Cpe10g00508 . 73 232 Homeobox Transcription Factor Family AT5G47370 59.9 4.8e-43 172.2
Cpe01g00772 . 117 242 Homeobox Transcription Factor Family AT5G47370 71.9 2.6e-41 166.4
Cpe02g01596 . 76 206 Homeobox Transcription Factor Family AT5G47370 63.4 1.2e-38 157.5
Cpe10g00508 . 1 266 Homeobox Transcription Factor Family AT4G37790 65.4 1.4e-84 310.1
Cpe19g00701 . 1 256 Homeobox Transcription Factor Family AT4G37790 61.1 4.3e-81 298.5
Cpe01g00772 . 1 275 Homeobox Transcription Factor Family AT4G37790 56.1 2.0e-73 273.1
Cpe14g00930 . 10 229 Homeobox Transcription Factor Family AT4G37790 53.7 6.1e-51 198.4
Cpe12g00802 . 148 303 Homeobox Transcription Factor Family AT4G37790 66.5 1.8e-50 196.8
Cpe08g00728 . 88 212 Homeobox Transcription Factor Family AT4G37790 78.4 2.6e-49 193.0
Cpe17g00660 . 149 276 Homeobox Transcription Factor Family AT4G37790 76.3 2.6e-49 193.0
Cpe03g00363 . 159 307 Homeobox Transcription Factor Family AT4G37790 62.4 1.1e-47 187.6
Cpe03g01822 CCT,CST 130 246 Homeobox Transcription Factor Family AT4G37790 76.9 2.3e-45 179.9
Cpe02g01596 . 79 205 Homeobox Transcription Factor Family AT4G37790 69.8 1.1e-44 177.6
Cpe04g01341 . 73 188 Homeobox Transcription Factor Family AT4G37790 71.6 5.7e-41 165.2
Cpe03g01822 CCT,CST 1 277 Homeobox Transcription Factor Family AT3G60390 59.0 2.8e-76 282.7
Cpe08g00624 CCT,CST 1 303 Homeobox Transcription Factor Family AT3G60390 54.6 1.2e-71 267.3
Cpe14g00930 . 2 236 Homeobox Transcription Factor Family AT3G60390 58.2 3.1e-67 252.7
Cpe08g00728 . 62 219 Homeobox Transcription Factor Family AT3G60390 67.4 8.5e-57 218.0
Cpe12g00802 . 102 283 Homeobox Transcription Factor Family AT3G60390 62.2 1.0e-49 194.5
Cpe17g00660 . 94 279 Homeobox Transcription Factor Family AT3G60390 59.0 2.5e-48 189.9
Cpe19g00701 . 63 220 Homeobox Transcription Factor Family AT3G60390 63.1 5.5e-48 188.7
Cpe01g00772 . 105 240 Homeobox Transcription Factor Family AT3G60390 68.1 3.0e-46 183.0
Cpe10g00508 . 73 229 Homeobox Transcription Factor Family AT3G60390 62.9 6.7e-46 181.8
Cpe03g00363 . 117 289 Homeobox Transcription Factor Family AT3G60390 54.5 1.5e-45 180.6
Cpe02g01596 . 92 208 Homeobox Transcription Factor Family AT3G60390 72.0 1.0e-41 167.9
Cpe04g01341 . 66 200 Homeobox Transcription Factor Family AT3G60390 63.7 1.3e-41 167.5
Cpe19g00701 . 1 256 Homeobox Transcription Factor Family AT2G22800 61.7 2.0e-78 289.7
Cpe10g00508 . 1 266 Homeobox Transcription Factor Family AT2G22800 59.5 6.6e-74 274.6
Cpe01g00772 . 1 275 Homeobox Transcription Factor Family AT2G22800 53.1 3.5e-67 252.3
Cpe12g00802 . 128 275 Homeobox Transcription Factor Family AT2G22800 67.6 4.3e-49 192.2
Cpe17g00660 . 146 313 Homeobox Transcription Factor Family AT2G22800 59.5 4.3e-49 192.2
Cpe14g00930 . 48 229 Homeobox Transcription Factor Family AT2G22800 56.7 3.7e-48 189.1
Cpe08g00728 . 90 212 Homeobox Transcription Factor Family AT2G22800 74.0 2.6e-46 183.0
Cpe03g00363 . 158 279 Homeobox Transcription Factor Family AT2G22800 70.5 1.1e-44 177.6
Cpe03g01822 CCT,CST 130 246 Homeobox Transcription Factor Family AT2G22800 73.5 1.2e-43 174.1
Cpe02g01596 . 85 205 Homeobox Transcription Factor Family AT2G22800 69.4 1.0e-42 171.0
Cpe08g00624 CCT,CST 79 264 Homeobox Transcription Factor Family AT2G22800 51.3 2.4e-39 159.8
Cpe04g01341 . 73 188 Homeobox Transcription Factor Family AT2G22800 70.7 2.6e-38 156.4
Cpe09g00102 CCT,ECH 55 781 Homeobox Transcription Factor Family AT3G61150 56.8 7.8e-224 774.2
Cpe04g00733 CCT,CST,ECH 96 499 Homeobox Transcription Factor Family AT3G61150 56.8 3.1e-127 453.4
Cpe12g00015 CCT,CST,ECH 1 310 Homeobox Transcription Factor Family AT3G61150 72.8 7.1e-124 442.2
Cpe14g00118 CCT,ECH 1 332 Homeobox Transcription Factor Family AT3G61150 52.1 2.3e-106 384.0
Cpe03g01710 CCT,ECH 1 344 Homeobox Transcription Factor Family AT3G61150 52.1 8.7e-106 382.1
Cpe17g00350 CCT,CST,ECH 1 271 Homeobox Transcription Factor Family AT3G61150 71.7 4.0e-103 373.2
Cpe06g00228 CCT,CST 46 373 Homeobox Transcription Factor Family AT4G08150 67.8 4.0e-120 428.7
Cpe02g00244 CCT,CST 48 355 Homeobox Transcription Factor Family AT4G08150 70.2 7.5e-119 424.5
Cpe11g00100 CCT,CST 74 381 Homeobox Transcription Factor Family AT4G08150 59.6 3.1e-96 349.4
Cpe07g00541 CCT,CST 34 308 Homeobox Transcription Factor Family AT4G08150 63.8 3.4e-95 345.9
Cpe19g00947 . 106 356 Homeobox Transcription Factor Family AT4G08150 56.6 3.3e-74 276.2
Cpe09g00513 CST 79 315 Homeobox Transcription Factor Family AT4G08150 55.3 7.9e-68 255.0
Cpe11g00023 . 80 319 Homeobox Transcription Factor Family AT4G08150 50.6 4.8e-65 245.7
Cpe04g01564 . 78 325 Homeobox Transcription Factor Family AT4G08150 50.4 1.3e-59 227.6
Cpe01g01547 . 44 189 Homeobox Transcription Factor Family AT4G08150 59.7 2.0e-39 160.6
Cpe09g00513 CST 1 323 Homeobox Transcription Factor Family AT1G70510 59.5 5.6e-101 364.8
Cpe11g00023 . 6 316 Homeobox Transcription Factor Family AT1G70510 57.2 1.7e-94 343.2
Cpe06g00228 CCT,CST 110 348 Homeobox Transcription Factor Family AT1G70510 50.2 1.6e-63 240.4
Cpe01g01547 . 38 197 Homeobox Transcription Factor Family AT1G70510 59.4 3.0e-46 183.0
Cpe01g01546 CST 1 185 Homeobox Transcription Factor Family AT1G70510 53.6 6.7e-46 181.8
Cpe06g00313 . 130 482 Homeobox Transcription Factor Family AT5G25220 74.8 3.5e-135 478.8
Cpe11g00311 . 174 451 Homeobox Transcription Factor Family AT5G25220 82.7 3.7e-132 468.8
Cpe07g00308 . 140 460 Homeobox Transcription Factor Family AT5G25220 72.0 7.4e-125 444.5
Cpe02g00470 . 116 388 Homeobox Transcription Factor Family AT5G25220 78.0 1.3e-113 407.1
Cpe05g00299 CCT 22 301 Homeobox Transcription Factor Family AT5G25220 69.6 9.4e-104 374.4
Cpe13g00185 CCT 12 248 Homeobox Transcription Factor Family AT5G25220 64.1 2.1e-79 293.5
Cpe06g00313 . 170 489 Homeobox Transcription Factor Family AT5G11060 76.5 3.8e-131 465.3
Cpe11g00311 . 162 460 Homeobox Transcription Factor Family AT5G11060 76.4 5.1e-128 454.9
Cpe07g00308 . 200 470 Homeobox Transcription Factor Family AT5G11060 77.7 1.1e-119 427.2
Cpe02g00470 . 166 388 Homeobox Transcription Factor Family AT5G11060 86.1 3.8e-107 385.6
Cpe05g00299 CCT 33 300 Homeobox Transcription Factor Family AT5G11060 68.2 4.5e-100 362.1
Cpe13g00185 CCT 27 248 Homeobox Transcription Factor Family AT5G11060 67.1 3.4e-79 292.7
Cpe06g00313 . 98 467 Homeobox Transcription Factor Family AT4G32040 59.4 5.1e-109 391.7
Cpe11g00311 . 71 437 Homeobox Transcription Factor Family AT4G32040 56.6 6.7e-109 391.3
Cpe07g00308 . 107 445 Homeobox Transcription Factor Family AT4G32040 57.7 2.0e-100 363.2
Cpe02g00470 . 81 388 Homeobox Transcription Factor Family AT4G32040 58.8 4.0e-93 339.0
Cpe05g00299 CCT 33 286 Homeobox Transcription Factor Family AT4G32040 65.0 7.7e-89 324.7
Cpe13g00185 CCT 19 248 Homeobox Transcription Factor Family AT4G32040 59.9 7.3e-71 265.0
Cpe09g00513 CST 1 324 Homeobox Transcription Factor Family AT1G23380 65.7 2.1e-114 409.5
Cpe11g00023 . 6 310 Homeobox Transcription Factor Family AT1G23380 61.4 5.8e-101 364.8
Cpe07g00857 CST 59 297 Homeobox Transcription Factor Family AT1G23380 53.0 1.3e-68 257.3
Cpe02g00244 CCT,CST 100 330 Homeobox Transcription Factor Family AT1G23380 54.2 5.0e-68 255.4
Cpe06g00228 CCT,CST 108 348 Homeobox Transcription Factor Family AT1G23380 54.1 5.0e-68 255.4
Cpe11g00875 CST 59 290 Homeobox Transcription Factor Family AT1G23380 55.0 1.9e-67 253.4
Cpe01g01546 CST 1 185 Homeobox Transcription Factor Family AT1G23380 63.0 6.1e-58 221.9
Cpe01g01547 . 47 198 Homeobox Transcription Factor Family AT1G23380 63.8 5.7e-48 188.7
Cpe05g00299 CCT 1 300 Homeobox Transcription Factor Family AT1G62990 77.6 7.2e-127 450.7
Cpe13g00185 CCT 1 258 Homeobox Transcription Factor Family AT1G62990 73.1 1.7e-99 359.8
Cpe06g00313 . 175 481 Homeobox Transcription Factor Family AT1G62990 60.8 1.1e-95 347.1
Cpe11g00311 . 174 451 Homeobox Transcription Factor Family AT1G62990 63.3 7.2e-95 344.4
Cpe07g00308 . 197 459 Homeobox Transcription Factor Family AT1G62990 60.6 1.8e-90 329.7
Cpe02g00470 . 167 388 Homeobox Transcription Factor Family AT1G62990 62.7 4.6e-73 271.9
Cpe05g00298 . 1 147 Homeobox Transcription Factor Family AT1G62990 67.6 1.1e-45 181.0
Cpe15g00193 . 59 554 Homeobox Transcription Factor Family AT4G17710 56.9 2.0e-146 516.9
Cpe05g00164 . 166 448 Homeobox Transcription Factor Family AT4G17710 56.5 7.9e-79 292.4
Cpe05g00163 . 3 163 Homeobox Transcription Factor Family AT4G17710 55.3 1.1e-40 165.6
Cpe09g00164 CST 4 298 Homeobox Transcription Factor Family AT1G26960 56.6 6.8e-65 244.6
Cpe01g01454 CST 4 305 Homeobox Transcription Factor Family AT1G26960 61.7 4.4e-64 241.9
Cpe13g00941 CCT,ECH 1 299 Homeobox Transcription Factor Family AT3G01220 51.0 2.4e-50 196.4
Cpe01g02383 CCT,ECH 1 298 Homeobox Transcription Factor Family AT3G01220 53.6 3.1e-50 196.1
Cpe02g01091 . 71 377 Homeobox Transcription Factor Family AT1G17920 61.6 6.5e-102 369.0
Cpe02g01091 . 71 372 Homeobox Transcription Factor Family AT1G73360 63.8 2.3e-102 370.5
Cpe01g00033 . 33 185 Homeobox Transcription Factor Family AT1G70920 63.3 9.9e-47 183.7
Cpe20g00379 CCT,CST 60 727 Homeobox Transcription Factor Family AT1G05230 66.8 1.1e-258 889.8
Cpe15g00750 CCT,CST,ECH 56 678 Homeobox Transcription Factor Family AT1G05230 67.5 7.7e-255 877.1
Cpe05g01445 CCT,CST,ECH 54 512 Homeobox Transcription Factor Family AT1G05230 69.1 3.7e-201 698.7
Cpe04g00733 CCT,CST,ECH 95 498 Homeobox Transcription Factor Family AT1G05230 82.4 1.9e-192 669.8
Cpe19g00972 CCT,CST 73 589 Homeobox Transcription Factor Family AT1G05230 62.1 1.1e-184 644.0
Cpe16g00448 CCT,CST,ECH 36 434 Homeobox Transcription Factor Family AT1G05230 59.1 4.5e-170 595.5
Cpe10g00792 CCT 127 526 Homeobox Transcription Factor Family AT1G05230 54.7 2.6e-138 490.0
Cpe12g00015 CCT,CST,ECH 1 310 Homeobox Transcription Factor Family AT1G05230 63.7 1.0e-102 371.7
Cpe02g01091 . 55 376 Homeobox Transcription Factor Family AT1G05230 50.7 1.4e-86 318.2
Cpe17g00350 CCT,CST,ECH 3 271 Homeobox Transcription Factor Family AT1G05230 63.3 2.2e-84 310.8
Cpe03g01710 CCT,ECH 30 345 Homeobox Transcription Factor Family AT1G05230 53.9 2.9e-84 310.5
Cpe14g00118 CCT,ECH 30 331 Homeobox Transcription Factor Family AT1G05230 52.8 2.3e-81 300.8
Cpe04g00733 CCT,CST,ECH 89 498 Homeobox Transcription Factor Family AT2G32370 52.5 6.6e-121 432.2
Cpe01g00672 . 52 214 Homeobox Transcription Factor Family AT4G36740 56.0 7.4e-44 174.5
Cpe12g00015 CCT,CST,ECH 1 307 Homeobox Transcription Factor Family AT5G52170 59.3 2.4e-96 350.5
Cpe14g00118 CCT,ECH 30 333 Homeobox Transcription Factor Family AT5G52170 56.4 1.8e-91 334.3
Cpe03g01710 CCT,ECH 30 343 Homeobox Transcription Factor Family AT5G52170 52.6 3.0e-83 307.0
Cpe17g00350 CCT,CST,ECH 1 271 Homeobox Transcription Factor Family AT5G52170 57.9 4.9e-78 289.7
Cpe15g00193 . 1 556 Homeobox Transcription Factor Family AT5G46880 61.0 2.4e-191 666.4
Cpe05g00164 . 166 462 Homeobox Transcription Factor Family AT5G46880 66.0 2.7e-102 370.5
Cpe05g00163 . 4 177 Homeobox Transcription Factor Family AT5G46880 63.2 1.2e-49 195.7
Cpe10g00176 . 444 1939 Homeobox Transcription Factor Family AT1G28420 52.0 0.0e+00 1127.5
Cpe03g00311 CCT 168 441 Homeobox Transcription Factor Family AT2G16400 56.9 1.6e-75 280.8
Cpe05g00449 . 174 458 Homeobox Transcription Factor Family AT2G16400 55.7 1.6e-75 280.8
Cpe08g00966 CCT 182 455 Homeobox Transcription Factor Family AT2G16400 56.2 2.3e-74 276.9
Cpe05g01122 . 332 530 Homeobox Transcription Factor Family AT2G16400 60.8 5.1e-61 232.6
Cpe20g00740 . 206 368 Homeobox Transcription Factor Family AT2G16400 55.4 2.4e-47 187.2
Cpe20g00740 . 206 371 Homeobox Transcription Factor Family AT2G27220 51.8 1.1e-43 174.9
Cpe03g00089 CCT,ECH 182 341 Homeobox Transcription Factor Family AT2G27220 52.8 9.5e-43 171.8
Cpe17g00578 . 153 403 Homeobox Transcription Factor Family AT2G35940 55.6 3.8e-62 236.9
Cpe12g00736 . 208 476 Homeobox Transcription Factor Family AT2G35940 51.8 1.1e-61 235.3
Cpe10g00394 . 295 477 Homeobox Transcription Factor Family AT2G35940 57.5 6.9e-56 216.1
Cpe20g00740 . 206 376 Homeobox Transcription Factor Family AT2G35940 59.7 1.4e-53 208.4
Cpe03g00089 CCT,ECH 182 356 Homeobox Transcription Factor Family AT2G35940 51.3 3.7e-49 193.7
Cpe10g00394 . 222 484 Homeobox Transcription Factor Family AT4G34610 53.3 2.3e-54 210.7
Cpe05g01122 . 363 530 Homeobox Transcription Factor Family AT4G34610 62.5 1.1e-53 208.4
Cpe13g00140 CCT 191 386 Homeobox Transcription Factor Family AT4G34610 52.0 5.4e-48 189.5
Cpe02g01326 . 519 672 Homeobox Transcription Factor Family AT4G34610 60.4 2.1e-44 177.6
Cpe05g00355 CCT 266 438 Homeobox Transcription Factor Family AT4G34610 51.1 4.0e-43 173.3
Cpe19g00315 . 179 321 Homeobox Transcription Factor Family AT4G34610 52.9 6.7e-38 156.0
Cpe20g00379 CCT,CST 62 727 Homeobox Transcription Factor Family AT4G04890 72.7 3.1e-283 971.5
Cpe15g00750 CCT,CST,ECH 63 678 Homeobox Transcription Factor Family AT4G04890 64.7 1.3e-244 843.2
Cpe19g00972 CCT,CST 1 585 Homeobox Transcription Factor Family AT4G04890 57.0 1.1e-208 723.8
Cpe05g01445 CCT,CST,ECH 54 510 Homeobox Transcription Factor Family AT4G04890 63.5 3.9e-185 645.6
Cpe04g00733 CCT,CST,ECH 95 498 Homeobox Transcription Factor Family AT4G04890 77.6 3.7e-180 629.0
Cpe16g00448 CCT,CST,ECH 38 432 Homeobox Transcription Factor Family AT4G04890 51.6 2.1e-146 516.9
Cpe12g00015 CCT,CST,ECH 1 309 Homeobox Transcription Factor Family AT4G04890 63.5 1.2e-104 378.3
Cpe03g01710 CCT,ECH 30 344 Homeobox Transcription Factor Family AT4G04890 52.2 8.3e-87 318.9
Cpe02g01091 . 71 373 Homeobox Transcription Factor Family AT4G04890 55.2 2.4e-86 317.4
Cpe17g00350 CCT,CST,ECH 1 271 Homeobox Transcription Factor Family AT4G04890 61.4 1.2e-85 315.1
Cpe14g00118 CCT,ECH 30 331 Homeobox Transcription Factor Family AT4G04890 52.3 1.5e-83 308.1
Cpe04g01322 . 140 562 Homeobox Transcription Factor Family AT4G29940 59.6 3.1e-137 486.5
Cpe16g00533 . 1 703 Homeobox Transcription Factor Family AT5G60690 68.9 0.0e+00 1114.4
Cpe05g00818 . 1 647 Homeobox Transcription Factor Family AT5G60690 63.2 7.2e-289 990.3
Cpe19g01171 CCT,CST 1 707 Homeobox Transcription Factor Family AT5G60690 58.5 5.2e-271 931.0
Cpe10g00053 CCT 11 613 Homeobox Transcription Factor Family AT5G60690 70.7 1.1e-244 843.6
Cpe07g00669 . 3 523 Homeobox Transcription Factor Family AT5G60690 79.4 6.0e-243 837.8
Cpe20g00561 CCT,CST 2 595 Homeobox Transcription Factor Family AT5G60690 70.3 3.9e-242 835.1
Cpe17g00535 . 55 571 Homeobox Transcription Factor Family AT5G60690 67.8 1.4e-199 693.7
Cpe02g00509 CCT,ECH 16 526 Homeobox Transcription Factor Family AT5G60690 67.1 1.2e-193 674.1
Cpe06g00492 CCT,ECH 20 525 Homeobox Transcription Factor Family AT5G60690 67.9 4.4e-193 672.2
Cpe12g00658 . 9 576 Homeobox Transcription Factor Family AT5G60690 62.8 7.5e-193 671.4
Cpe06g00487 . 20 518 Homeobox Transcription Factor Family AT5G60690 67.8 1.2e-190 664.1
Cpe19g00947 . 97 359 Homeobox Transcription Factor Family AT1G62360 77.5 3.7e-115 412.1
Cpe06g00228 CCT,CST 112 352 Homeobox Transcription Factor Family AT1G62360 60.2 6.4e-75 278.5
Cpe02g00244 CCT,CST 104 334 Homeobox Transcription Factor Family AT1G62360 60.8 1.2e-73 274.2
Cpe07g00541 CCT,CST 20 283 Homeobox Transcription Factor Family AT1G62360 52.0 3.5e-65 246.1
Cpe11g00100 CCT,CST 101 355 Homeobox Transcription Factor Family AT1G62360 54.0 7.8e-65 245.0
Cpe09g00513 CST 82 324 Homeobox Transcription Factor Family AT1G62360 51.8 4.3e-63 239.2
Cpe04g00712 CCT,CST,ECH 38 231 Homeobox Transcription Factor Family AT1G62360 53.9 1.6e-62 237.3
Cpe11g00023 . 80 309 Homeobox Transcription Factor Family AT1G62360 52.5 6.9e-61 231.9
Cpe04g01564 . 71 319 Homeobox Transcription Factor Family AT1G62360 51.8 3.5e-57 219.5
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000957 1 7 2 1 2 2 4 2 2 2 2 2 4 2 2 4 2 2 4 2 2 2 2 3 3 2 2 12 5 1 85
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
50222 PF03791 KNOX2 3.40E-19 No_clan Cpe TF
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Cpe11g00311 Cpe_Chr11 FPKM 0.0 0.0 0.0 0.0 4.254631 3.63555 4.182658 0.0 0.0 0.0