Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe11g00328 ATGCCGCGCCTGCTTCATGGGACGCTTCAAGCCGATATATATGGAATCGACAAGCTTCGAACTGGATGTCCTGTTTTCTGCGGGAAGTTACTAACTGAGGTGAATTTGTCATTGCAGGATAAAAGGTATCTTGTGACAGGGGGGTCTAATTTCTTGTTTGTCATTTATTTTCTATGTTCATCCAATATGGAGATTGTTGGCTCTCAAATGTACGCAACACTCGATCTTGATAAGGCCCGAGTTGGCCGAACGAGAATCGTGGATCAGCCATACAGTCCTCAATGGAATGATCATTTTCGTGTATACTGTGCTCATACACTGTCACATGTTATATTCACAATAAAAGATGGAGGTGTAGTTGGTGCAACATTAATTGGAAGAGCTTATGTGCCTGTTGAGGATATCATTAAGGGATATGTATATGAGAGATGGGTTGAAATATTAGATGAAGACCGGAAGCCATTATATGGTCGTCCTAAAATCCATGTAAAGTTACAATTTTCGAGTGTTGTTGAAGACAGGAGCTGGTCCCAAGGAATCCGAGATCCGAAGTTCGGTGGTGTACCATTCACATTCTTCAAGCAAAGATGGGGTTGCAAAGTTTCTCTTTACCAAGATGCTCATGTTTTAAACAACTTCCTCCCTCGAGTCGGGTTGTCAAGAGGGAACTTTCATGAAGTTCATAGGTGTTGGGAGGACATTTTCGATGCAATTAGCAATGCGAAACACTTGATTTATCTAACTGGTTGGTCTGTTTATACTGAAATAACATTGATAAGAGACAGAGAAAGAAGACAAACAGGAGACGATATTACTCTTGGGGAACTGCTGAAGAAGAAAGCAGAGGAAGGTGTGACTGTTTTGCTTCTTGTTTGGGATGACAGAACTTCCATTGAAGAGTTCAAACGAGATGGTTTGATGGCAACTCACGATCAAGAAACTGCAGAGTATTTCAGGGGCTCGAAGGTTCGATGCGTTCTGTGCCCACGGTATCCTGATGTTGGTAGAACCATAATTCAGGGGTTTGAGACAGCAACCACGTTTACTCACCACCAAAAAACATTGGTGCTTGATAGTGAAATAGCTGGTGGAGGAACAGGGAAAAGAAGGATCGTGAGCTTTGTTGGTGGTATTGATCTATGTGATGGGAGATATGATACACCAAAACACCCTTTGTTTTCAACTCTAGATTCAATCCACTATAAAGATTTTCACCAGCCTAACTTTTCAGGCTCTTCGATAAGGAAAGGCGGTCCTCGGGAACCATGGCATGACATCCATTGCCGCCTGGAAGGACCAGTTGCTTGGGATGTTTTGTACAATTTTGAGCAAAGATGGCGAAAGCAAGTTGGAAATAACTCGTTGATTCCAATGCAAAAGTTTGAAGAAATCATTACTCGTCCCGTAATGGTATTACCATCAGACGACCCCGACACATGGAATGTTCAAATATTTCGATCTATCGACGGTGGTGCTGTTGAGGGCTTTCCAGAGATACCTGAAGATGCTTCTAAACTAGGCCTTGTAAGTGGGAAGGATAGTGTTTTAGATAGAAGTATTCAAGATGCTTATATTAACGCCATTCGCCGAGCTAAAAATTTCATATATATTGAGAATCAGTATTTCATTGGAAGCTCTTATGGGTGGAAATCAAATGGTGTGAGGGTAGAAAGCATCAATGCTTTGCATCTTATTCCAAAGGAGATTTCATTGAAGATTGTAAGCAAGATTGAAGCTGGAGAGAGGTTTACAGCATATATTGTGATTCCAATGTGGCCGGAAGGTATTCCTGAGAGTGCTTCAGTTCAAGCAATATTAGATTGGCAGAGGAGAACCTTAGACATGATGTACACTGATATAACTCAAGCTCTTCGGAAGAAGGGTCTCGACGCGAATCCTACAGATTACCTGACGTTCTTCTGCCTTGGCAATCGAGAGAAGAAGAGAACTGGAGAATATATTCCACCGGAGAAACCAGAACCGAACTCGGATTACGCTCGTGCTCAAGAGTTTCGACGTTTTATGATCTATGTTCATTCTAAAATGATGATAGTTGACGATGAATACATAATTATTGGGTCTGCAAACATCAACCAGAGGTCAATGGATGGAGGAAGAGACTCTGAGATAGCCATGGGGGCTTTTCAGCCGCATCACTTGGCATCTAGTGAGCCTGCAAGAGGTCAAATCTATGGCTTCCGAGTGGCTCTCTGGTACGAACATCTTGGTCTGTTTGACAAAGTCTTCCATAACCCGGAGAGTGAAGACTGCGTCCAATTCGTAAACAAGCTCGCCTTAGAAAACTGGCAATTTTACTCGGACGATACCTTTGATGGCGATCTTCCTGGTCATCTTCTTTCCTACCCCATCGAAGTAGGCCCCAATGGGACGATCTCGGCGCTTAAAAAATTTGAACTTTTCCCTGACACGAAGGCTCGTGTTCTTGGGCAATTGTCTGATTATCTACCTCCAAACCTGACCACTTGA 2487 42.78 MPRLLHGTLQADIYGIDKLRTGCPVFCGKLLTEVNLSLQDKRYLVTGGSNFLFVIYFLCSSNMEIVGSQMYATLDLDKARVGRTRIVDQPYSPQWNDHFRVYCAHTLSHVIFTIKDGGVVGATLIGRAYVPVEDIIKGYVYERWVEILDEDRKPLYGRPKIHVKLQFSSVVEDRSWSQGIRDPKFGGVPFTFFKQRWGCKVSLYQDAHVLNNFLPRVGLSRGNFHEVHRCWEDIFDAISNAKHLIYLTGWSVYTEITLIRDRERRQTGDDITLGELLKKKAEEGVTVLLLVWDDRTSIEEFKRDGLMATHDQETAEYFRGSKVRCVLCPRYPDVGRTIIQGFETATTFTHHQKTLVLDSEIAGGGTGKRRIVSFVGGIDLCDGRYDTPKHPLFSTLDSIHYKDFHQPNFSGSSIRKGGPREPWHDIHCRLEGPVAWDVLYNFEQRWRKQVGNNSLIPMQKFEEIITRPVMVLPSDDPDTWNVQIFRSIDGGAVEGFPEIPEDASKLGLVSGKDSVLDRSIQDAYINAIRRAKNFIYIENQYFIGSSYGWKSNGVRVESINALHLIPKEISLKIVSKIEAGERFTAYIVIPMWPEGIPESASVQAILDWQRRTLDMMYTDITQALRKKGLDANPTDYLTFFCLGNREKKRTGEYIPPEKPEPNSDYARAQEFRRFMIYVHSKMMIVDDEYIIIGSANINQRSMDGGRDSEIAMGAFQPHHLASSEPARGQIYGFRVALWYEHLGLFDKVFHNPESEDCVQFVNKLALENWQFYSDDTFDGDLPGHLLSYPIEVGPNGTISALKKFELFPDTKARVLGQLSDYLPPNLTT 828
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1747964 1751199 - Cp4.1LG11g03250.1 Cpe11g00328 477122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe11g00328 828 SMART C2_3c 52 144 IPR000008 -
Cpe11g00328 828 ProSiteProfiles C2 domain profile. 30 145 IPR000008 -
Cpe11g00328 828 Gene3D C2 domain 59 179 IPR035892 -
Cpe11g00328 828 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 346 384 IPR001736 GO:0003824
Cpe11g00328 828 CDD C2_plant_PLD 1 167 - -
Cpe11g00328 828 Gene3D Endonuclease Chain A 497 721 - -
Cpe11g00328 828 Pfam Phospholipase D C terminal 746 817 IPR024632 -
Cpe11g00328 828 PIRSF PLD_plant 1 828 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Cpe11g00328 828 Gene3D Endonuclease Chain A 221 469 - -
Cpe11g00328 828 SUPERFAMILY Phospholipase D/nuclease 506 757 - -
Cpe11g00328 828 Pfam Phospholipase D Active site motif 347 384 IPR001736 GO:0003824
Cpe11g00328 828 Pfam Phospholipase D Active site motif 675 701 IPR001736 GO:0003824
Cpe11g00328 828 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 674 701 IPR001736 GO:0003824
Cpe11g00328 828 PANTHER PHOSPHOLIPASE D ALPHA 3 3 828 - -
Cpe11g00328 828 SUPERFAMILY Phospholipase D/nuclease 173 459 - -
Cpe11g00328 828 Pfam C2 domain 68 147 IPR000008 -
Cpe11g00328 828 SMART pld_4 674 701 IPR001736 GO:0003824
Cpe11g00328 828 SMART pld_4 346 384 IPR001736 GO:0003824
Cpe11g00328 828 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 67 168 IPR035892 -
Cpe11g00328 828 PANTHER PHOSPHOLIPASE D 3 828 IPR015679 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g01720 Cpe-Chr2:14089946 Cpe11g00328 Cpe-Chr11:1747964 0 dispersed
Cpe11g00328 Cpe-Chr11:1747964 Cpe17g00574 Cpe-Chr17:4702323 1.44E-11 dispersed
Cpe11g00328 Cpe-Chr11:1747964 Cpe11g00275 Cpe-Chr11:1476758 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe11g00328 K01115 - csv:101207900 1492.25