Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe11g00345 ATGGGGGCTCCATTCGAGGGAATAGCAAATGATTTCAAGGGGAGGATAGCATGCTACAAACAGGATTGGGTTTGTGCACTATGTTCAGGCGTCAGGATTTTAGCTCCCACTATGTACATTTTCTTCGCCTCTGCTCTTCCTGTTATCGCCTTTGGAGAGCAACTTAGTAGGGATACAGGTGGAAGTTTGAGCACAGTGGAAGCATTAGCCTCAACTGCGCTGTGTGGAATTATCCACTCAATATTTGGGGGGCAGCCTTTGCTGATTTTAGGAGTGGCAGAACCAACAGTTATAATGTACATTTACCTGTACAATTTCTGCACAGGCAGGCCGGAGTTAGGGGGCAAGCTCTTTTTAGCCTGGGCTGGATGGGTGTGCATCTGGACAGGATTCTTCCTGATTCTCCTCGCAATCTTCAATGCTTGCGCTGTCATCACCAAATTTACAAGAGTTGCGGGGGAATTATTTGGCATGCTTATTGCTGTTCTTTTCTTCCAAGAGGCAATAAAGGGATTGATCAGCGAGTTCAATATTCCCAAGTCAGAAAATCCAGAGGAAGTGAAGTACCAATTTCAATGGTTGTATACAAATGGATTGCTTGCTATCATTTTTTCTGTGGGTTTACTCTTCACAGCCTTGAAAAGCAGACATGCTAGATCATGGAAATATGGCACTGGCTGGTTTCGGAGTTTCATTGCGGACTATGGGGTTCCACTTATGGTCGTGTGTTGGACAGCATTGTCTTATGGAGTTCCCAGCAAAGTTCCAGATGGAGTTCCAAGGAGACTCTTTTGTCCATTACCTTGGGAACCAGCCTCATTGTACCACTGGACTGTAGTGAAGGACATGGGGAAGGTTCCGCCGACTTACATCTTTGCTGCTTGTCTGCCAGCCGTGATGATAGCAGGTCTATACTTTTTTGACCATAGTGTTGCATCACAATTGGCGCAACAGAAAGAGTTTAATCTTCAAAAGCCACCTGCATATCATTATGATGTCCTCTTGCTTGGGATTATGACTTTGATTTGTGGATTGCTTGGATTACCTCCTTCTAATGGTGTTCTCCCACAGTCCCCAATGCACACCAAGAGTCTGGCAGTGCTTAAACGGCAGCTAATTCGAAGAAAAATGGTTAAGAGTGCAAAAGAATGTATCAAACAAAAAGCTAGCAACTCTGAAATTTATGGAAAGATGCAGGCTGTGTTCATTGAAATGGACACATCTCCAACTCCTAAAGAGCTAGAAACCTTGACGAAGGCAGTGATGAATGCCGATGATGGTAATCAGGACGGAAAATTCGATGCTGAGAAAAATATAGATCCTTATTTGCCTGTTCGTGTGAATGAGCAAAGGATGAGCAACTTGCTGCAGTCTTTCCTTGTTGCCTTGACATTACTTGCTATCCCTATAATGAAAATGATACCCACTTCTGTTCTGTGGGGATACTTTGCTTATATGGCCATTGATAGTCTCCCAGGAAATCAGTTCTGGGAAAGGATGTTATTGCTCTTCATTACACCCGGTCGGCGTTTCAAGGTCTTGGAGGGGTCTCATTTATCCATCGTTGAATCTGTGCCATTCAAGATCATCGCTTCATTTACCCTCCTTCAGTTAGCATATTTCTTGCTGTGCTTTGGTGTAACATGGATACCTGTAGCTGGAATCATGTTCCCACTTCCATTTTTCCTCCTCATTAGCATAAGAGAGCATGTGCTCCCCAAGTTCTTCCAGCATAGCCATCTTCAAGAGCTCGATGCTTCAGAGTACGAGGAGATTGCCGGTGCTCGACGTCGTGCCAAGAATCTCAAGAATCTCAACATTCCGGAAAAGGAACGACCTGATACAATTGTGGAAGAAAATAACGAAGAATACTATGATGCGGAGATATTAGATGAGATGACAACTCATAGAGGAGAGTTGAAGCTTAGGACTGTAAGTCACAACGAAGAACGGTTCCTGCAGATTCATCCTGAAGATTCCCTTCAAAGACAATGA 1995 44.06 MGAPFEGIANDFKGRIACYKQDWVCALCSGVRILAPTMYIFFASALPVIAFGEQLSRDTGGSLSTVEALASTALCGIIHSIFGGQPLLILGVAEPTVIMYIYLYNFCTGRPELGGKLFLAWAGWVCIWTGFFLILLAIFNACAVITKFTRVAGELFGMLIAVLFFQEAIKGLISEFNIPKSENPEEVKYQFQWLYTNGLLAIIFSVGLLFTALKSRHARSWKYGTGWFRSFIADYGVPLMVVCWTALSYGVPSKVPDGVPRRLFCPLPWEPASLYHWTVVKDMGKVPPTYIFAACLPAVMIAGLYFFDHSVASQLAQQKEFNLQKPPAYHYDVLLLGIMTLICGLLGLPPSNGVLPQSPMHTKSLAVLKRQLIRRKMVKSAKECIKQKASNSEIYGKMQAVFIEMDTSPTPKELETLTKAVMNADDGNQDGKFDAEKNIDPYLPVRVNEQRMSNLLQSFLVALTLLAIPIMKMIPTSVLWGYFAYMAIDSLPGNQFWERMLLLFITPGRRFKVLEGSHLSIVESVPFKIIASFTLLQLAYFLLCFGVTWIPVAGIMFPLPFFLLISIREHVLPKFFQHSHLQELDASEYEEIAGARRRAKNLKNLNIPEKERPDTIVEENNEEYYDAEILDEMTTHRGELKLRTVSHNEERFLQIHPEDSLQRQ 664
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1871037 1875813 - Cp4.1LG11g03420.1 Cpe11g00345 477139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe11g00345 664 Pfam HCO3- transporter family 445 507 IPR011531 GO:0006820|GO:0016021
Cpe11g00345 664 Pfam HCO3- transporter family 4 178 IPR011531 GO:0006820|GO:0016021
Cpe11g00345 664 Pfam HCO3- transporter family 195 371 IPR011531 GO:0006820|GO:0016021
Cpe11g00345 664 PANTHER ANION EXCHANGE PROTEIN 3 660 IPR003020 GO:0005452|GO:0006820|GO:0016020
Cpe11g00345 664 Gene3D Helical hairpin bin 15 57 - -
Cpe11g00345 664 PANTHER BORON TRANSPORTER 6-RELATED 3 660 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe07g00280 Cpe11g00345 CCT
Cpe07g00280 Cpe11g00345 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g01540 Cpe-Chr2:13082660 Cpe11g00345 Cpe-Chr11:1871037 0 dispersed
Cpe11g00345 Cpe-Chr11:1871037 Cpe20g00245 Cpe-Chr20:1386587 0 dispersed
Cpe03g01125 Cpe-Chr3:9240831 Cpe11g00345 Cpe-Chr11:1871037 0 transposed
Cpe11g00345 Cpe-Chr11:1871037 Cpe07g00280 Cpe-Chr7:1844904 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe11g00345 K24194 - csv:101220188 1199.88