Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe11g00352 ATGAAGTTTGCGAATGAAAAAACTGTGTTCGTGTTGCAGAGTTCAACCGGAAAAATGAGCCTACGCAAGGGCTCTAAGGTTTGGGTGGAAGACAGGGATTCTGCTTGGGTGGCTGGTGAAGTCATCGAGTTCGGCGGTAAACAAGCTCGAGTTGCAACTATTACTGGAAAGAAGGTCTTGGCTCTTCCTGAGAAGCTTTTGCCGAGGGATGCGGATGAGGACGAGCATGGAGGGGTGGATGATATGACGAAGTTGACCTATTTGAATGAGCCTGGGGTGCTTTATAATCTTCGAAGAAGATATTCTCTCAATGACATATATACATACACAGGTAGCATTTTGATTGCTGTTAATCCATTCACAAAGCTTCCCCATCTATACAATGTTCACATGATGGAGCAGTACAAGGGAGCACCTTTTGGGGAACTGAGCCCCCATGTTTTTGCAGTTGCTGATGCATCCTATAGAGCAATGATTAGTGAGGGTCGAAGCCAGTCAATATTGGTCAGTGGAGAGAGTGGTGCAGGGAAAACCGAGACAACAAAATTGATTATGCAGTATCTTACATTTGTTGGAGGTCGAGCGTCTGGCAATGACAGAACTGTTGAGCAACAAGTTCTTGAATCAAATCCTTTGCTGGAAGCATTTGGTAATGCAAGGACAGTTAGAAACGATAATTCAAGGCTAACTCTGGATAAAAACTATATAATCTTGAATGATGGGGACATTTACTTATCTGAAGTTATTTGGAAAAGGCATATGGATGCAGAGAAGTACAAGTTAGACCACCCAAGTCATTTTCGATACTTAAATCAAAGCAAGACCTATGAATTAGATGGAGTGAGCAATGCTGAGGAGTATATTAGGACAAGGAGGGCAATGGATATAGTTGGTATCAGCCATGAGGATCAGGAAGCTATCTTTCGTACCTTGGCTGCAATTTTGCATTTGGGGAACATTGAGTTTTTGCCTGGAAAAGAACACGACTCTTCCGTCTTGAAGGATGAAAAGTCTACCTTTCATTTAGGGGTGGCTTCTAATCTTCTCATGTGTAATTCCAACCTCTTGGTCTCAGCCCTTTGTACTCGTTCAATTCATACTCATGAAGGAATTATTGTCAAAGCGCTAGATTGTGAAGGTGCCGTTGCTAGTCGAGATGCATTGGCAAAGACTGTTTACGCTCGTCTGTTTGATTGGCTTGTTGATAAGATCAACCGATCTGTCGGACAAGATCCAAATTCTCAATTTCAAATTGGGTTATTGGACATTTATGGTTTTGAATGCTTTAAGGACAATAGTTTTGAGCAGTTTTGCATCAATTTTGCGAATGAAAAGCTTCAGCAACATTTTAATGAGCATGTGTTTAAGATGGAGCAGGAAGAGTATAGCAAAGAGGAAATAAATTGGAGCTACATTGAATTCATCGACAATCAGGATGTGTTGGATTTGATTGAGAAGAAACCTATTGGGATCATTGGTTTGCTGGATGAGGCTTGTCTGTTTCCAAGATCAACTCATGAAACATTCTCAACCAAATTATTTCAGAACTTTCATACTCACCCAAGGTTGGAAAGAACAAAATTTTCAGAAACAGATTTCACTCTTTCCCATTATGCTGGAAAGGTCACTTATCATACAGACACCTTTTTAGATAAAAATCGTGATTATGTTGTGGTAGAGCATTGCAGTCTATTGGCTTCTTCTAGATGCACTTTTGTTGCTGGCCTTTTCTCTTCCGTTCCAGAGGAATCTTCAAGATCATCGTATAAATTTTCTTCTGTAGCCTCAAGATTTAAGCAACAACTTCAAGCACTTATGGAGACACTGAATTCTACTGAGCCCCATTATGTACGCTGTGTGAAGCCAAATTCTCTTAATAAGCCCCAGAAGTTTGAGAACCCAAGCATTCTGCATCAATTACGTTGTGGGGGTGTTTTGGAAGCTGTTCGAATAAGTCTTGCAGGTTATCCCTCCAGAAGAACTTATACAGAGTTTATTGACCGTTTTGGTTTGTTGGCTCCTGATTTATTGGATGGAAGCTACGATGAAAGGTTGATAACAGAAAAAATTCTACAAAAGTTGAAGCTAAAAAATTTTCAGTTAGGTAGGACCAAAATATTTCTTAGGGCTGGTCAAATTGGCATTCTGGATGCTCGAAGAGCTGAAGTATTGGATAATGCTGCGAAGTGTATTCAACGCCGATTACAAACATATCATGCGCGCAAGGATTTTTTATTGATGCGTTCTACTGCAATTTCACTTCAAGCATACTGCAGAGGATGCCTTGCCCGAAAGTTTTATGTTGCGAAACGAGAAAGTGCTGCTGCCACTACGATACAGAAATATATTCGCAGGTGGTTCTCCAGGAATACTTATTTGGAGCTCTATAAAGCTGCTCTAACCATACAGTCCAGTATTCGTGGTTTTACGACTCGCAAAAGGTTTTTGCATGATAGAAGAAATAAAGCTGCGATATTAATTCAGGCTCAATGGAGGACATTCAAGGTTCGTACTGTTTTCCATCGCCACCAAGCTTATATTATTTCAATACAATGTCGATGGAGGCAAAAGCTTGCAAAAAGGGAACTTCGAAGACTTAAACAGGAAGCTAATGAAGCTGGAGCATTGCGTTTAGCTAAGAACAAACTTGAGAAGCAGTTGGAAGATCTTACGTGGCGGTTGCATTTGGAGAAAAGACTGCGGGAGAAGTATGCATTTGAAAGAGAAATTGTAGCAGTAGTTGAACTAAAGAAAGAAAATGCTTTCCTCAAGAGTGCTTTGGATGCCCTGGAGAAAAGGAACTCAGCTCTGGAGGTTAAGCTTGTTGAGGCACAAAAGGATGGCAACCACACTGTTGAAAAGTTGCAGGAGGTTGAACAGAAATGCACTAAGCTGCAACATAATGTGAAAAGTCTCGAAGAAAAACTCTCAGTTTTAAAGGATGAGAATCACGTATTGCGGCAGAAAGCCTTAAGTGCAACTCCGAGGAGCACCCGACCCAATTTTGTAAGGGCATTATCTGAGAAATCTTCTGGTGCGCTTATCCCTAATGCTGACAGGAAAACTCTCTTTGAGTCACCAACACCTACAAAACTGGTTGCACCATTTTCACAAGGCCTTTCCGAATCACGACGAACAAAATTAACTGTAGAGAGACACCAGGAAAACTACGAACTCCTTTCTAGGTGTATTAAAGAAAATTTGGGGTTTAAAGGTGGTAAGCCACTGGCCGCTTGCATCATCTACAAATGCCTTCTTAACTGGCATGCCTTTGAATCAGAACGAACAGTTATCTTTGACTACATAATTGAACGAATAAATGATGCCCTCAAGGTTGGGGATGAGAACATTGCCTTGTCATATTGGTTGTCAAACGCTTCTGCATTACTATGCCTCCTGCAAAGAAATATAAAGTCAAATGGATTTTTGAGCGCAGCTACTCAGCGTTCTGCAGGTTCTACTGGCTTAGCTAGCAGGATTTCTCAGGGACTAAAATCACCCTTCAAATATATTACTTTTGAAGATGGAATTTCTCATCTTGAAGCAAGATATCCGGCTATATTGTTTAAACAGCAATTAACTGCTTGTGTGGAGAAGATATTCGGCATGATTCGTGATAATTTGAAGAAAGAATTGTCTCCATTGTTGAGCTCATGTATTCAGGCGCCCAAAGCTGCACGAGTACATGCTGGGAAGTCCTCTAAATCGCCTGGTGTTCCTCAGCCATCTACAAGTAGTCCATGGGATAACATAATAAAGTTTTTGGATTCTTTGATGAGTCAATTACGTGAGAATCATGTACCGTCTTTCTTCATTCGTAAATTGATCACTCAGGTGTTCTCGTTCATCAATATTTCTCTTTTTAACAGCCTTCTTCTACGACGTGAATGTTGTACGTTTTCAAATGGCGAGTATGTGAAATCTGGTCTAGCTGAACTAGAGAAGTGGATTGGCAATGCAACAGATGAGTATTCAGGGACCTCTTGGCATGAACTAAACTATATAAGGCAATCTGTCGGGTTTCTGGTAATACATCAGAAGAGAAAGAAATCACTTGAAGAGATAAGACAGGATCTTTGCCCTGCATTGACTGTGAGACAAATTTATCGCATTAGTACTATGTATTGGGATGACAAATACGGCACTCAGAGTGTGTCAAACGAGGCAAGTGTGGTTGCTCAAATGAGGGAAATTCTGAACGAGGACAATCAGAATTTAACCTCAAATTCATTCTTGTTGGATGATGATCTAAGCATCCCATTCTCTACTGAAGACATTGATATGGCTCTTCCCCCTATCGAACCTTCAGACATCGAACTTCCCAGTTTCCTGTCCGAATACACCTGTGCGCAATTTCTCACCGAGCAGCAAAAGTAG 4377 40.9 MKFANEKTVFVLQSSTGKMSLRKGSKVWVEDRDSAWVAGEVIEFGGKQARVATITGKKVLALPEKLLPRDADEDEHGGVDDMTKLTYLNEPGVLYNLRRRYSLNDIYTYTGSILIAVNPFTKLPHLYNVHMMEQYKGAPFGELSPHVFAVADASYRAMISEGRSQSILVSGESGAGKTETTKLIMQYLTFVGGRASGNDRTVEQQVLESNPLLEAFGNARTVRNDNSRLTLDKNYIILNDGDIYLSEVIWKRHMDAEKYKLDHPSHFRYLNQSKTYELDGVSNAEEYIRTRRAMDIVGISHEDQEAIFRTLAAILHLGNIEFLPGKEHDSSVLKDEKSTFHLGVASNLLMCNSNLLVSALCTRSIHTHEGIIVKALDCEGAVASRDALAKTVYARLFDWLVDKINRSVGQDPNSQFQIGLLDIYGFECFKDNSFEQFCINFANEKLQQHFNEHVFKMEQEEYSKEEINWSYIEFIDNQDVLDLIEKKPIGIIGLLDEACLFPRSTHETFSTKLFQNFHTHPRLERTKFSETDFTLSHYAGKVTYHTDTFLDKNRDYVVVEHCSLLASSRCTFVAGLFSSVPEESSRSSYKFSSVASRFKQQLQALMETLNSTEPHYVRCVKPNSLNKPQKFENPSILHQLRCGGVLEAVRISLAGYPSRRTYTEFIDRFGLLAPDLLDGSYDERLITEKILQKLKLKNFQLGRTKIFLRAGQIGILDARRAEVLDNAAKCIQRRLQTYHARKDFLLMRSTAISLQAYCRGCLARKFYVAKRESAAATTIQKYIRRWFSRNTYLELYKAALTIQSSIRGFTTRKRFLHDRRNKAAILIQAQWRTFKVRTVFHRHQAYIISIQCRWRQKLAKRELRRLKQEANEAGALRLAKNKLEKQLEDLTWRLHLEKRLREKYAFEREIVAVVELKKENAFLKSALDALEKRNSALEVKLVEAQKDGNHTVEKLQEVEQKCTKLQHNVKSLEEKLSVLKDENHVLRQKALSATPRSTRPNFVRALSEKSSGALIPNADRKTLFESPTPTKLVAPFSQGLSESRRTKLTVERHQENYELLSRCIKENLGFKGGKPLAACIIYKCLLNWHAFESERTVIFDYIIERINDALKVGDENIALSYWLSNASALLCLLQRNIKSNGFLSAATQRSAGSTGLASRISQGLKSPFKYITFEDGISHLEARYPAILFKQQLTACVEKIFGMIRDNLKKELSPLLSSCIQAPKAARVHAGKSSKSPGVPQPSTSSPWDNIIKFLDSLMSQLRENHVPSFFIRKLITQVFSFINISLFNSLLLRRECCTFSNGEYVKSGLAELEKWIGNATDEYSGTSWHELNYIRQSVGFLVIHQKRKKSLEEIRQDLCPALTVRQIYRISTMYWDDKYGTQSVSNEASVVAQMREILNEDNQNLTSNSFLLDDDLSIPFSTEDIDMALPPIEPSDIELPSFLSEYTCAQFLTEQQK 1458
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1901097 1926414 - Cp4.1LG11g03590.1 Cpe11g00352 477146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe11g00352 1458 PANTHER PROTEIN OPAQUE1-LIKE 20 909 - -
Cpe11g00352 1458 PANTHER PROTEIN OPAQUE1-LIKE 918 1455 - -
Cpe11g00352 1458 Pfam IQ calmodulin-binding motif 797 815 IPR000048 GO:0005515
Cpe11g00352 1458 Pfam IQ calmodulin-binding motif 822 840 IPR000048 GO:0005515
Cpe11g00352 1458 Pfam IQ calmodulin-binding motif 774 792 IPR000048 GO:0005515
Cpe11g00352 1458 Pfam IQ calmodulin-binding motif 751 765 IPR000048 GO:0005515
Cpe11g00352 1458 Coils Coil 913 947 - -
Cpe11g00352 1458 Gene3D Kinesin motor domain 26 233 IPR036961 -
Cpe11g00352 1458 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 68 771 IPR027417 -
Cpe11g00352 1458 Gene3D - 821 871 - -
Cpe11g00352 1458 Gene3D - 773 820 - -
Cpe11g00352 1458 Gene3D - 723 772 - -
Cpe11g00352 1458 ProSiteProfiles IQ motif profile. 747 776 IPR000048 GO:0005515
Cpe11g00352 1458 ProSiteProfiles Myosin motor domain profile. 77 721 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cpe11g00352 1458 Pfam Myosin head (motor domain) 79 227 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cpe11g00352 1458 Pfam Myosin head (motor domain) 255 709 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cpe11g00352 1458 Gene3D - 655 722 - -
Cpe11g00352 1458 SMART DIL_2 1274 1381 IPR002710 -
Cpe11g00352 1458 Coils Coil 955 989 - -
Cpe11g00352 1458 ProSiteProfiles Dilute domain profile. 1100 1401 IPR002710 -
Cpe11g00352 1458 Coils Coil 856 900 - -
Cpe11g00352 1458 PRINTS Myosin heavy chain signature 417 445 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cpe11g00352 1458 PRINTS Myosin heavy chain signature 164 189 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cpe11g00352 1458 PRINTS Myosin heavy chain signature 211 238 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cpe11g00352 1458 PRINTS Myosin heavy chain signature 107 126 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cpe11g00352 1458 PRINTS Myosin heavy chain signature 470 498 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cpe11g00352 1458 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 776 870 IPR027417 -
Cpe11g00352 1458 ProSiteProfiles IQ motif profile. 795 824 IPR000048 GO:0005515
Cpe11g00352 1458 Gene3D Kinesin motor domain 411 651 IPR036961 -
Cpe11g00352 1458 CDD MyosinXI_CBD 1051 1424 IPR037975 GO:0007015
Cpe11g00352 1458 ProSiteProfiles IQ motif profile. 820 849 IPR000048 GO:0005515
Cpe11g00352 1458 Gene3D - 427 612 - -
Cpe11g00352 1458 ProSiteProfiles IQ motif profile. 772 801 IPR000048 GO:0005515
Cpe11g00352 1458 ProSiteProfiles IQ motif profile. 843 872 IPR000048 GO:0005515
Cpe11g00352 1458 PANTHER MYOSIN 918 1455 - -
Cpe11g00352 1458 SMART iq_5 794 816 IPR000048 GO:0005515
Cpe11g00352 1458 SMART iq_5 819 841 IPR000048 GO:0005515
Cpe11g00352 1458 SMART iq_5 723 745 IPR000048 GO:0005515
Cpe11g00352 1458 SMART iq_5 771 793 IPR000048 GO:0005515
Cpe11g00352 1458 SMART iq_5 746 768 IPR000048 GO:0005515
Cpe11g00352 1458 PANTHER MYOSIN 20 909 - -
Cpe11g00352 1458 Gene3D - 255 298 - -
Cpe11g00352 1458 Gene3D Myosin VI head, motor domain, U50 subdomain 300 590 - -
Cpe11g00352 1458 CDD MYSc_Myo11 91 709 IPR036018 -
Cpe11g00352 1458 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 22 71 IPR004009 GO:0003774|GO:0005524|GO:0016459
Cpe11g00352 1458 SMART MYSc_2a 71 722 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cpe11g00352 1458 Pfam DIL domain 1275 1378 IPR002710 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe11g00352 Cpe-Chr11:1901097 Cpe17g00648 Cpe-Chr17:5286872 0 dispersed
Cpe11g00352 Cpe-Chr11:1901097 Cpe11g01007 Cpe-Chr11:8497930 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe11g00352 K10357 - csv:101210527 2583.9