Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe11g00360 ATGGAGGAGATGTCCTCAGCGGTTGTGGTGCCATTTAGGGTAGGTAATTCAGTCTGTGATAACCCCAACATGGCAGCTACCCCCATGGATATCACAAGACTTAAGCTCATGGCAGATACTGCCGGTTTGTTATCCGACTCTGTGACGAAGGCTTCGGATGATTCGATTGAAGTAGTTTCTGATGATTGTAAGAGTTCTAATGGGGAGGAAGAGATTGGTATTGCTGCTGTTTCGGTTACGAATGATGATAAGTGCGAAAGCGTTCCGTTGTCGGTTGTGTTATCTCAAAGTAGTAGCAATTGGGTTGCGGCGGATGAGACGATATCGGTTGGATGTGAAGAAGATGATTGTTTATCTTTAGAGGGTGAACAGATTTATGATAGTTCTTGTTCACATTCAGTGGTTAGTGAAACTAGCAGCATTTGTGGTGATGATTTTTTAGCAACGGTACCTAAGTTTTCAGAACTTCCTGTTCAAATGCTTGTTGGTGACCGAGTTTTCGATGGCTCGAGCAAGGCTATAGCTCATCAAACCGTTCATTTTTTCGGGGTTTACGATGGTCATGGTGGTTCTCAGGTCGCTAATTATTGTCGTGAACGTATGCATTTGGCTTTATCTGAGGAGATAGAACTTGCTAAGCAAGATATAGCTGCTGGTAATATAAAGGATGATTGTCATGAGCTATGGAGAAAGGCATTCACCAAATGCTTTGTAAAAGTTGATGCTGAAATTGGAGGGGGACCTGGTGTTGAGCCTGTTGCACCAGAAACTGTTGGCTCCACTGCTGTTGTTGCCATTATCTGTGCATCTCATATCATTGTTGCAAATTGTGGCGACTCGAGAGCTGTTCTTTGTCGTCGGAAGGAGCCGATGGCATTGTCCGTGGATCACAAACCGAACAGAGAAGATGAATATGAACGGATTGAAGCTGCAGGTGGGAAGGTCATACAGTGGAACGGGCACCGTGTTTTTGGTGTTCTAGCGATGTCGAGATCGATCGGTGATAGATACTTGAAACCATGGATCATCCCGGAGCCAGAAGTGATGTTCATCCCTCGAGCGAAAGACGACGAATGTCTCGTTCTAGCCAGCGATGGTTTATGGGACGTGATGTCAAACGAAGAGGTATGCGACCTGGCTCGAAGACGAATCCTTCTTTGGCACAAGAAGAACGGTGTCAGTTTACCTTCTGAGAGAGGGGTGGGGATTGATCCTGCAGCCCAAGCAGCTGCGGAATACCTCTCGAAACGAGCTCTTCAAAAGGGCAGCAAAGACAACATCACGATCGTCGTGATCGATTTGAAAGCTCATTGGAAGTTCAAGACGAAATCATAA 1335 45.69 MEEMSSAVVVPFRVGNSVCDNPNMAATPMDITRLKLMADTAGLLSDSVTKASDDSIEVVSDDCKSSNGEEEIGIAAVSVTNDDKCESVPLSVVLSQSSSNWVAADETISVGCEEDDCLSLEGEQIYDSSCSHSVVSETSSICGDDFLATVPKFSELPVQMLVGDRVFDGSSKAIAHQTVHFFGVYDGHGGSQVANYCRERMHLALSEEIELAKQDIAAGNIKDDCHELWRKAFTKCFVKVDAEIGGGPGVEPVAPETVGSTAVVAIICASHIIVANCGDSRAVLCRRKEPMALSVDHKPNREDEYERIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVMFIPRAKDDECLVLASDGLWDVMSNEEVCDLARRRILLWHKKNGVSLPSERGVGIDPAAQAAAEYLSKRALQKGSKDNITIVVIDLKAHWKFKTKS 444
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1979639 1987618 - Cp4.1LG11g03600.1 Cpe11g00360 477154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe11g00360 444 CDD PP2Cc 176 434 IPR001932 -
Cpe11g00360 444 PANTHER ALPHABET, ISOFORM E-RELATED 140 443 - -
Cpe11g00360 444 SMART PP2C_4 121 432 IPR001932 -
Cpe11g00360 444 ProSitePatterns PPM-type phosphatase domain signature. 181 189 IPR000222 GO:0043169
Cpe11g00360 444 ProSiteProfiles PPM-type phosphatase domain profile. 128 434 IPR001932 -
Cpe11g00360 444 Gene3D - 131 444 IPR036457 -
Cpe11g00360 444 SUPERFAMILY PP2C-like 164 435 IPR036457 -
Cpe11g00360 444 PANTHER PROTEIN PHOSPHATASE 2C 6-RELATED 140 443 - -
Cpe11g00360 444 Pfam Protein phosphatase 2C 174 427 IPR001932 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe07g00568 Cpe11g00360 CCT
Cpe07g00568 Cpe11g00360 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g01730 Cpe-Chr2:14166055 Cpe11g00360 Cpe-Chr11:1979639 3.02E-163 dispersed
Cpe11g00360 Cpe-Chr11:1979639 Cpe18g00401 Cpe-Chr18:5219854 1.74E-76 dispersed
Cpe11g00360 Cpe-Chr11:1979639 Cpe07g00568 Cpe-Chr7:3762139 2.28E-50 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe11g00360 K14497 - csv:101207918 563.918