Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe11g00366 ATGGCAGAAAAGGAATCCGGAGAGGCTATCCGGCCGGAATTTCCGATGGGGCGAATAAAGAAGATAATGAAGCTGGACAAGGACATTGGTAAAGTGAATTCAGAAGCGCTGTTTTTAGTCTCATGCGCCACTGAGCTTTTCCTTGAGCTTCTCGCTGAAAAATCTTCCGAAGTCGCCGCCGAGAAGAAACGGAAGACCGTGAAGCTTGAACACATCCGAATCGCCGTCAAAAGGCATCAATCGATCAGTGATTTTCTCCTCGATTCGCTTCCTCTTCCTTCTCAGCCGTCGGATGCTCCGGCGAAGGACGAGAATCGCACTCGCGTTGTCGTTGATAAAGTGGCTCCTGAAGGAACCCGCCGAATCGATGATTTCTTTCGCCGGCCAGCGAAGACCGCGTCCGCGGAGATCAACGAGACATAG 423 51.54 MAEKESGEAIRPEFPMGRIKKIMKLDKDIGKVNSEALFLVSCATELFLELLAEKSSEVAAEKKRKTVKLEHIRIAVKRHQSISDFLLDSLPLPSQPSDAPAKDENRTRVVVDKVAPEGTRRIDDFFRRPAKTASAEINET 140
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2009655 2010077 + Cp4.1LG11g03620.1 Cpe11g00366 477160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe11g00366 140 Gene3D Histone, subunit A 1 91 IPR009072 GO:0046982
Cpe11g00366 140 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 13 76 IPR003958 -
Cpe11g00366 140 SUPERFAMILY Histone-fold 12 91 IPR009072 GO:0046982
Cpe11g00366 140 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 3 128 - -
Cpe11g00366 140 PANTHER NUCLEAR FACTOR Y, SUBUNIT C13 3 128 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe07g00062 Cpe-Chr7:302060 Cpe11g00366 Cpe-Chr11:2009655 4.15E-48 dispersed
Cpe11g00366 Cpe-Chr11:2009655 Cpe18g00908 Cpe-Chr18:8122394 2.45E-10 dispersed
Cpe11g00366 Cpe-Chr11:2009655 Cpe01g01183 Cpe-Chr1:7036369 1.53E-11 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
50228 PF00808 CBFD_NFYB_HMF 3.90E-21 CL0012 Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe11g00366 - - cmo:103488501 223.787