Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe11g00373 GAAGAAGAAGAAGAAGAAGAAGAACAAGGAATAAGGGCTGCGGCAACTTTTAGGAGGAGGGACGATCAGATCAGATCGATTCATTTTTTGTTCAACTCTAGGGCTTTGATTTTTTCACATTCGGTGGTAAAAAAGGCAATCGATTTGATACCGGACGCAATTTTAATGGACGACGGAGGAGCTTCTCAGCCGGACGACGCCGTCATGTCGGAGGCGGCGGCTATACCGTCGCAGCATGACCCGGCGGCGCACCAGCCGCCGTCGATGGGGATGGAAAATATTCCGGCGACTTTGAGCCATGGAGGGAGATTTATTCAGTACAATATCTTTGGTAACATCTTTGAAGTTACGGCTAAGTACAAGCCTCCCATTATGCCTATTGGCAAAGGCGCTTATGGCATCACAAACGAGCACGTGGCGATCAAGAAGATTGCTAATGCGTTTGACAACAAGATCGATGCTAAGAGAACTCTTCGCGAGATCAAGCTTCTTCGGCACATGGATCATGAAAACGTTGTTGCAATTAGGGATATCATACCTCCGCCTCTAAGGGAAACATTTAATGATGTTTATATAGCATATGAGCTGATGGATACCGACCTTCATCAAATAATTCGTTCAAACCAAGCATTATCAGAGGAGCATTGTCAGTATTTCCTGTACCAGATTCTTCGAGGATTGAAGTACATACATTCAGCAAATGTTCTGCACAGAGATTTGAAGCCTTCCAATCTGTTATTAAATGCCAACTGTGACCTGAAAATATGTGATTTTGGACTTGCTCGTGTTACTTCTGAAACCGACTTTATGACAGAATATGTGGTTACAAGATGGTACCGCGCGCCAGAGCTCTTACTTAATTCATCTGACTACACAGCAGCTATCGATGTCTGGTCTGTTGGTTGTATTTTTATGGAACTGATGGATCGGAAGCCCTTGTTTCCTGGTCGAGATCATGTGCATCAGTTACGCTTGCTTTTGGAGCTGATTGGCACTCCATCAGAGGCTGAACTCGGTTTCTTGAACGAGAATGCTAAAAGATACATACGCCAACTTCCTTATTACCATCGGCAGTCATTTACTGGAAAGTTTCCACATGTCCATCCTGCAGCCATTGATCTGGTGGAGAAGATGTTAACATTTGATCCAGGACAGAGAATTACCGTTGAAGATGCTCTAGCTCATCCTTATTTGACATCATTGCATGACATTAGTGATGAGCCTGTCTGCCTGACTCCATTCAGCTTTGATTTCGAGCAGCATGCACTTACGGAGGAACAGATGAAAGAGCTGATCTATCGAGAGGCGCTTGCATTCAACCCCGAGTATTATCAGCAATAA 1341 44.44 EEEEEEEEQGIRAAATFRRRDDQIRSIHFLFNSRALIFSHSVVKKAIDLIPDAILMDDGGASQPDDAVMSEAAAIPSQHDPAAHQPPSMGMENIPATLSHGGRFIQYNIFGNIFEVTAKYKPPIMPIGKGAYGITNEHVAIKKIANAFDNKIDAKRTLREIKLLRHMDHENVVAIRDIIPPPLRETFNDVYIAYELMDTDLHQIIRSNQALSEEHCQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARVTSETDFMTEYVVTRWYRAPELLLNSSDYTAAIDVWSVGCIFMELMDRKPLFPGRDHVHQLRLLLELIGTPSEAELGFLNENAKRYIRQLPYYHRQSFTGKFPHVHPAAIDLVEKMLTFDPGQRITVEDALAHPYLTSLHDISDEPVCLTPFSFDFEQHALTEEQMKELIYREALAFNPEYYQQ 446
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2047885 2054386 + Cp4.1LG11g03650.1 Cpe11g00373 477167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe11g00373 446 Gene3D Transferase(Phosphotransferase) domain 1 197 425 - -
Cpe11g00373 446 ProSitePatterns MAP kinase signature. 148 251 IPR003527 GO:0004707|GO:0005524|GO:0006468
Cpe11g00373 446 ProSitePatterns Serine/Threonine protein kinases active-site signature. 235 247 IPR008271 GO:0004672|GO:0006468
Cpe11g00373 446 SUPERFAMILY Protein kinase-like (PK-like) 126 406 IPR011009 -
Cpe11g00373 446 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 86 444 - -
Cpe11g00373 446 ProSiteProfiles Protein kinase domain profile. 99 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe11g00373 446 SMART serkin_6 121 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe11g00373 446 CDD STKc_TEY_MAPK 114 441 - -
Cpe11g00373 446 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 86 444 - -
Cpe11g00373 446 Pfam Protein kinase domain 135 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe11g00373 446 Gene3D Phosphorylase Kinase; domain 1 104 435 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe11g00373 Cpe-Chr11:2047885 Cpe13g00136 Cpe-Chr13:984706 0 dispersed
Cpe11g00373 Cpe-Chr11:2047885 Cpe07g00074 Cpe-Chr7:358653 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62705 PF00069 Pkinase 1.10E-66 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe11g00373 K14512 - csv:101204301 764.992