Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe11g00373 | GAAGAAGAAGAAGAAGAAGAAGAACAAGGAATAAGGGCTGCGGCAACTTTTAGGAGGAGGGACGATCAGATCAGATCGATTCATTTTTTGTTCAACTCTAGGGCTTTGATTTTTTCACATTCGGTGGTAAAAAAGGCAATCGATTTGATACCGGACGCAATTTTAATGGACGACGGAGGAGCTTCTCAGCCGGACGACGCCGTCATGTCGGAGGCGGCGGCTATACCGTCGCAGCATGACCCGGCGGCGCACCAGCCGCCGTCGATGGGGATGGAAAATATTCCGGCGACTTTGAGCCATGGAGGGAGATTTATTCAGTACAATATCTTTGGTAACATCTTTGAAGTTACGGCTAAGTACAAGCCTCCCATTATGCCTATTGGCAAAGGCGCTTATGGCATCACAAACGAGCACGTGGCGATCAAGAAGATTGCTAATGCGTTTGACAACAAGATCGATGCTAAGAGAACTCTTCGCGAGATCAAGCTTCTTCGGCACATGGATCATGAAAACGTTGTTGCAATTAGGGATATCATACCTCCGCCTCTAAGGGAAACATTTAATGATGTTTATATAGCATATGAGCTGATGGATACCGACCTTCATCAAATAATTCGTTCAAACCAAGCATTATCAGAGGAGCATTGTCAGTATTTCCTGTACCAGATTCTTCGAGGATTGAAGTACATACATTCAGCAAATGTTCTGCACAGAGATTTGAAGCCTTCCAATCTGTTATTAAATGCCAACTGTGACCTGAAAATATGTGATTTTGGACTTGCTCGTGTTACTTCTGAAACCGACTTTATGACAGAATATGTGGTTACAAGATGGTACCGCGCGCCAGAGCTCTTACTTAATTCATCTGACTACACAGCAGCTATCGATGTCTGGTCTGTTGGTTGTATTTTTATGGAACTGATGGATCGGAAGCCCTTGTTTCCTGGTCGAGATCATGTGCATCAGTTACGCTTGCTTTTGGAGCTGATTGGCACTCCATCAGAGGCTGAACTCGGTTTCTTGAACGAGAATGCTAAAAGATACATACGCCAACTTCCTTATTACCATCGGCAGTCATTTACTGGAAAGTTTCCACATGTCCATCCTGCAGCCATTGATCTGGTGGAGAAGATGTTAACATTTGATCCAGGACAGAGAATTACCGTTGAAGATGCTCTAGCTCATCCTTATTTGACATCATTGCATGACATTAGTGATGAGCCTGTCTGCCTGACTCCATTCAGCTTTGATTTCGAGCAGCATGCACTTACGGAGGAACAGATGAAAGAGCTGATCTATCGAGAGGCGCTTGCATTCAACCCCGAGTATTATCAGCAATAA | 1341 | 44.44 | EEEEEEEEQGIRAAATFRRRDDQIRSIHFLFNSRALIFSHSVVKKAIDLIPDAILMDDGGASQPDDAVMSEAAAIPSQHDPAAHQPPSMGMENIPATLSHGGRFIQYNIFGNIFEVTAKYKPPIMPIGKGAYGITNEHVAIKKIANAFDNKIDAKRTLREIKLLRHMDHENVVAIRDIIPPPLRETFNDVYIAYELMDTDLHQIIRSNQALSEEHCQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARVTSETDFMTEYVVTRWYRAPELLLNSSDYTAAIDVWSVGCIFMELMDRKPLFPGRDHVHQLRLLLELIGTPSEAELGFLNENAKRYIRQLPYYHRQSFTGKFPHVHPAAIDLVEKMLTFDPGQRITVEDALAHPYLTSLHDISDEPVCLTPFSFDFEQHALTEEQMKELIYREALAFNPEYYQQ | 446 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 2047885 | 2054386 | + | Cp4.1LG11g03650.1 | Cpe11g00373 | 477167 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe11g00373 | 446 | Gene3D | Transferase(Phosphotransferase) domain 1 | 197 | 425 | - | - | |
Cpe11g00373 | 446 | ProSitePatterns | MAP kinase signature. | 148 | 251 | IPR003527 | GO:0004707|GO:0005524|GO:0006468 | |
Cpe11g00373 | 446 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 235 | 247 | IPR008271 | GO:0004672|GO:0006468 | |
Cpe11g00373 | 446 | SUPERFAMILY | Protein kinase-like (PK-like) | 126 | 406 | IPR011009 | - | |
Cpe11g00373 | 446 | PANTHER | MITOGEN-ACTIVATED PROTEIN KINASE | 86 | 444 | - | - | |
Cpe11g00373 | 446 | ProSiteProfiles | Protein kinase domain profile. | 99 | 398 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe11g00373 | 446 | SMART | serkin_6 | 121 | 398 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe11g00373 | 446 | CDD | STKc_TEY_MAPK | 114 | 441 | - | - | |
Cpe11g00373 | 446 | PANTHER | MITOGEN-ACTIVATED PROTEIN KINASE | 86 | 444 | - | - | |
Cpe11g00373 | 446 | Pfam | Protein kinase domain | 135 | 398 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe11g00373 | 446 | Gene3D | Phosphorylase Kinase; domain 1 | 104 | 435 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe11g00373 | Cpe-Chr11:2047885 | Cpe13g00136 | Cpe-Chr13:984706 | 0 | dispersed | |
Cpe11g00373 | Cpe-Chr11:2047885 | Cpe07g00074 | Cpe-Chr7:358653 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
62705 | PF00069 | Pkinase | 1.10E-66 | CL0016 | Cpe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe11g00373 | K14512 | - | csv:101204301 | 764.992 |