Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe11g00422 ATGGCGTTACAGAACATTGGTGCCTCAAACCGTGACGATGCCTTCTATAGGTATAAGATGCCTAGGATGGTTACTAAAATTGAAGGTAGAGGTAATGGCATCAAGACTAATGTAGTTAACATGGTGGACATTGCAAAAGCCTTGGGCAGACCTGCCGCTTACACTACCAAGTACTTCGGATGTGAGCTTGGCGCACAATCCAAGTTTGATGAGAAAACAGGGATTGCTCTTGTAAATGGAGCACATGAGACGGCGAAGTTGGCTGGTCTTCTCGAGAACTTCATCAAGAAATATGTTCAATGCTATGGTTGTGGAAACCCTGAAACTGAGATAATCATCACAAAGACGCAGATGATCAATATGAAATGTGCTGCTTGTGGATTCATATCTGATGTTGATATGAGAGATAAACTCACTACATTTATTCTCAAGAATCCTCCTGAACAGAAGAAGGGATCAAAAGACAAGAAAGCAATGAGGCGGGCTGAGAAGGAACGGCTTAAGGAAGGAGAGGCTGCTGATGAGGAACTGAAGAAAATAAAGAAGGATTCCCTGAAGAAGAAAAGCACTAGTGGTAATGCAAAGGAAGCTTTGAGTGCTGTCACTGCTGATATGGTAATGCTCTCTACAACTGAAGAGACAAAGTCATCAAAGAAGTCCCCCGAACACGAGAAGTCTGTGGTCAACGGAAGCAAGAACGGAAATGGAGTGTCTACCCATGGTGCCCTTGTTCATGAGATCAAAGATTATTTGAAGAAAAGCCCATCTGCAGCCGATCTTAAATCATTCTTGGAGTCACTTACTGGAACTCACCAAGAGACTGCGAATGCCTTAGTTGAGGCTCTATTTGAAGGAGTTGGGAAAGGGTTCTCAAAGGAGGTAGTGAAAAAGAAGAAGTTCCTGGTTGCAGTTGCAGCAGCTCAGGAGGAGGGATCACAGATAGTTCTGTTGCGTTCCATCGAATCTTTCTGTCTCAACACGAGTCCGGAGGCGGCCAAGGAGATCGCACTGGTCCTGAAATCGTTATACGATGGGGATGTAATAGAGGAAGAAATCGTGCTAGAGTGGTACCAGCAGGGACTTGCAGGAGCTAACAAAGGTAGCCAAATCTGGAAGCATGTAAAGCCGTTCATCGAGTGGCTCCAGAACGCAGAGTCGGAGACGGAAGAAGAGTAA 1176 45.07 MALQNIGASNRDDAFYRYKMPRMVTKIEGRGNGIKTNVVNMVDIAKALGRPAAYTTKYFGCELGAQSKFDEKTGIALVNGAHETAKLAGLLENFIKKYVQCYGCGNPETEIIITKTQMINMKCAACGFISDVDMRDKLTTFILKNPPEQKKGSKDKKAMRRAEKERLKEGEAADEELKKIKKDSLKKKSTSGNAKEALSAVTADMVMLSTTEETKSSKKSPEHEKSVVNGSKNGNGVSTHGALVHEIKDYLKKSPSAADLKSFLESLTGTHQETANALVEALFEGVGKGFSKEVVKKKKFLVAVAAAQEEGSQIVLLRSIESFCLNTSPEAAKEIALVLKSLYDGDVIEEEIVLEWYQQGLAGANKGSQIWKHVKPFIEWLQNAESETEEE 391
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2379859 2381208 - Cp4.1LG11g04190.1 Cpe11g00422 477216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe11g00422 391 Gene3D - 105 145 - -
Cpe11g00422 391 SUPERFAMILY ARM repeat 242 385 IPR016024 -
Cpe11g00422 391 ProSiteProfiles W2 domain profile. 218 391 IPR003307 GO:0005515
Cpe11g00422 391 Pfam eIF4-gamma/eIF5/eIF2-epsilon 313 391 IPR003307 GO:0005515
Cpe11g00422 391 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 1 195 IPR045196 GO:0003743|GO:0006413
Cpe11g00422 391 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 98 133 IPR016190 GO:0003743|GO:0006413
Cpe11g00422 391 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 5-1-RELATED 195 391 - -
Cpe11g00422 391 SMART eIF2Bneu4 15 129 IPR002735 GO:0003743|GO:0006413
Cpe11g00422 391 Gene3D - 237 391 - -
Cpe11g00422 391 CDD W2_eIF5 238 389 - -
Cpe11g00422 391 MobiDBLite consensus disorder prediction 148 175 - -
Cpe11g00422 391 MobiDBLite consensus disorder prediction 145 175 - -
Cpe11g00422 391 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 195 391 IPR045196 GO:0003743|GO:0006413
Cpe11g00422 391 Pfam Domain found in IF2B/IF5 11 127 IPR002735 GO:0003743|GO:0006413
Cpe11g00422 391 Gene3D - 2 104 - -
Cpe11g00422 391 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 5-1-RELATED 1 195 - -
Cpe11g00422 391 MobiDBLite consensus disorder prediction 210 237 - -
Cpe11g00422 391 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 10 101 IPR016189 GO:0003743|GO:0006413
Cpe11g00422 391 SMART 542_3 299 387 IPR003307 GO:0005515
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe11g00422 Cpe-Chr11:2379859 Cpe07g00119 Cpe-Chr7:668781 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe11g00422 K03262 - csv:101210873 565.074