Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe11g00438 ATGGAGACGGAGAGGGAGAAGCTTGTTTACTTGGCCAGACTTGCAGAACAAGCAGAGAGATATGATGAAATGGTGGAAATGATGAAGAGCGTCGCGAAGTTGGACGTAGAACTTACTGTGGAGGAGAGGAACCTGGTCTCTGTGGGATATAAGAACGTTATTGGGGCAAGAAGAGCCTCATGGCGTATTCTATCTTCTATTGAACAAAAGGAGGAAGGAAAGAAGAATGAGGCTAATGTGAAGAGGGTCAAGGAGAAAGGGGATTATAATCGATACTTAGCGGAGTTTAAATCTGGCCAAGAACGCGAAGAAGCTGCAGACCAGTCGATGAAGGCCTATGAGTCTGCCTCAAGCATTGCAAGCTCTGATCTTCCTCCAACCCATCCAATCAGACTTGGCTTGGCGCTTAACTATTCTGTTTTCTACTATGAGATATTAAATTCCCCAGAGAGGGCATGCCACCTTGCTAAACAAGCTTTTGATGATGCCATAGCTGAACTCGATGGCCTCAATGAAGAATCCTACAAGGATAGTACCCTCATCATGCAATTGCTGAGGGATAATCTCACGTTATGGACCTCAGATCTCCCAGAAGAGGGAGGCGAGCAATCTAAAGCTGCTGATGAACCTTGA 633 45.81 METEREKLVYLARLAEQAERYDEMVEMMKSVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEGKKNEANVKRVKEKGDYNRYLAEFKSGQEREEAADQSMKAYESASSIASSDLPPTHPIRLGLALNYSVFYYEILNSPERACHLAKQAFDDAIAELDGLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEQSKAADEP 210
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2479731 2482658 - Cp4.1LG11g04360.1 Cpe11g00438 477232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe11g00438 210 SUPERFAMILY 14-3-3 protein 4 195 IPR036815 -
Cpe11g00438 210 ProSitePatterns 14-3-3 proteins signature 2. 175 194 IPR023409 -
Cpe11g00438 210 Pfam 14-3-3 protein 75 193 IPR023410 -
Cpe11g00438 210 PIRSF 14-3-3 77 205 IPR000308 -
Cpe11g00438 210 PIRSF 14-3-3 1 86 IPR000308 -
Cpe11g00438 210 PANTHER 14-3-3 PROTEIN 2 85 IPR000308 -
Cpe11g00438 210 PANTHER 14-3-3 PROTEIN 84 207 IPR000308 -
Cpe11g00438 210 ProSitePatterns 14-3-3 proteins signature 1. 43 53 IPR023409 -
Cpe11g00438 210 Gene3D - 1 83 IPR036815 -
Cpe11g00438 210 Gene3D - 84 204 IPR036815 -
Cpe11g00438 210 PANTHER 14-3-3-LIKE PROTEIN GF14 OMICRON 2 85 - -
Cpe11g00438 210 PANTHER 14-3-3-LIKE PROTEIN GF14 OMICRON 84 207 - -
Cpe11g00438 210 SMART 1433_4 5 206 IPR023410 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe11g00438 Cpe-Chr11:2479731 Cpe15g00838 Cpe-Chr15:8262657 3.28E-118 dispersed
Cpe11g00438 Cpe-Chr11:2479731 Cpe11g00447 Cpe-Chr11:2537299 3.89E-96 proximal
Cpe11g00438 Cpe-Chr11:2479731 Cpe02g01379 Cpe-Chr2:12113181 1.60E-99 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe11g00438 K06630 - csv:101222677 377.096