Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe11g00467 ATGGCGCCTTATTATCTTAGAACTCATCGGAATCGGAGCCACCGCCGCGGTGCCTCCGATGGGTTGCCGTTTATCAGCGATGAATGCTTGATTGAAATGGTTAAGAAGGAAACCCATCACTTGCCCCTTGATGGGTACCTCGGGAAGTTCCACAGCGGCGACTTGGATGTCCGAGCAAGAACAGAGGCCGTCGATTGGATTAAAAAGGTGAGTACTCATTTCAGATTTGGACCTCTCTGTATATACTTAGCCGTAAACTACTTGGATCGCTTCCTTTCTGCTTATGATCTACCCAAAGGCAAAGCTTGGACAATGCAGCTGCTTGCTGTGGCATGTATGTCCCTTGCAGCTAAATTGGAGGAGACAGAAGTCCCTCTCTCGTTGGATTTACAGGTGGGTGGATCAAAGTTTGTGTTTGAAGCAAGAACCATTGAAAGAATGGAGCTTTTAGTGTTGACAACATTGGGATGGAGAATGCAAGCAGTTACACCTTTCTCGTTTATCGATCATTACCTTCAAAAGATCCACGACGACGAATTCTCTCTCGAAATGTCAATCGGGCAATCGAGTCATCTACTCTTGAACATTATACATGGTATCGAGTTCTTGGAATTCAAACCGTCGGAGATTGCAGCAGCTGTGGCGATATCGGTCGCGGGGGAAGCTCAATCAGTGGACCCTGATAGAGCAATTCATCTCCTAATTCAGCAGCTCCAAATGGAAAGAGTTCTTAAATGTCTTAAGTTAATCGATGACATGTTCGTCTGCCGGGGTGGGTCAGGGAAGGGCTCGAGAGCATCGATGTCGTCGGAGCGACGGAGCCCGAGCGGGGTGTTGGAGGTGACATGCTTGAGCTATACAAGCAATGATACAGCAGTTGGGTCATGTGCTAACTCAGATGCTACAAAGAGGAGGAGATTGAACAGACCCTGTGAAGTAAATTTTTGA 948 47.26 MAPYYLRTHRNRSHRRGASDGLPFISDECLIEMVKKETHHLPLDGYLGKFHSGDLDVRARTEAVDWIKKVSTHFRFGPLCIYLAVNYLDRFLSAYDLPKGKAWTMQLLAVACMSLAAKLEETEVPLSLDLQVGGSKFVFEARTIERMELLVLTTLGWRMQAVTPFSFIDHYLQKIHDDEFSLEMSIGQSSHLLLNIIHGIEFLEFKPSEIAAAVAISVAGEAQSVDPDRAIHLLIQQLQMERVLKCLKLIDDMFVCRGGSGKGSRASMSSERRSPSGVLEVTCLSYTSNDTAVGSCANSDATKRRRLNRPCEVNF 315
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2638096 2639932 - Cp4.1LG11g04660.1 Cpe11g00467 477261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe11g00467 315 SMART cyclin_7 65 153 IPR013763 -
Cpe11g00467 315 CDD CYCLIN 60 152 IPR013763 -
Cpe11g00467 315 PANTHER CYCLINS 14 306 IPR039361 -
Cpe11g00467 315 SUPERFAMILY Cyclin-like 24 159 IPR036915 -
Cpe11g00467 315 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 14 306 - -
Cpe11g00467 315 Pfam Cyclin, N-terminal domain 33 159 IPR006671 -
Cpe11g00467 315 ProSitePatterns Cyclins signature. 60 91 IPR006671 -
Cpe11g00467 315 Pfam Cyclin, C-terminal domain 162 257 IPR004367 -
Cpe11g00467 315 Gene3D - 43 160 - -
Cpe11g00467 315 Gene3D - 32 247 - -
Cpe11g00467 315 SUPERFAMILY Cyclin-like 145 254 IPR036915 -
Cpe11g00467 315 SMART Cyclin_C_2 162 287 IPR004367 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe11g00467 Cpe-Chr11:2638096 Cpe11g00745 Cpe-Chr11:5841771 4.93E-56 dispersed
Cpe10g00541 Cpe-Chr10:3185468 Cpe11g00467 Cpe-Chr11:2638096 3.35E-87 wgd
Cpe11g00467 Cpe-Chr11:2638096 Cpe19g00744 Cpe-Chr19:5745874 1.05E-95 wgd
Cpe11g00467 Cpe-Chr11:2638096 Cpe07g00182 Cpe-Chr7:1142682 2.32E-139 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe11g00467 K18810 - csv:101216206 508.064