Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe11g00467 | ATGGCGCCTTATTATCTTAGAACTCATCGGAATCGGAGCCACCGCCGCGGTGCCTCCGATGGGTTGCCGTTTATCAGCGATGAATGCTTGATTGAAATGGTTAAGAAGGAAACCCATCACTTGCCCCTTGATGGGTACCTCGGGAAGTTCCACAGCGGCGACTTGGATGTCCGAGCAAGAACAGAGGCCGTCGATTGGATTAAAAAGGTGAGTACTCATTTCAGATTTGGACCTCTCTGTATATACTTAGCCGTAAACTACTTGGATCGCTTCCTTTCTGCTTATGATCTACCCAAAGGCAAAGCTTGGACAATGCAGCTGCTTGCTGTGGCATGTATGTCCCTTGCAGCTAAATTGGAGGAGACAGAAGTCCCTCTCTCGTTGGATTTACAGGTGGGTGGATCAAAGTTTGTGTTTGAAGCAAGAACCATTGAAAGAATGGAGCTTTTAGTGTTGACAACATTGGGATGGAGAATGCAAGCAGTTACACCTTTCTCGTTTATCGATCATTACCTTCAAAAGATCCACGACGACGAATTCTCTCTCGAAATGTCAATCGGGCAATCGAGTCATCTACTCTTGAACATTATACATGGTATCGAGTTCTTGGAATTCAAACCGTCGGAGATTGCAGCAGCTGTGGCGATATCGGTCGCGGGGGAAGCTCAATCAGTGGACCCTGATAGAGCAATTCATCTCCTAATTCAGCAGCTCCAAATGGAAAGAGTTCTTAAATGTCTTAAGTTAATCGATGACATGTTCGTCTGCCGGGGTGGGTCAGGGAAGGGCTCGAGAGCATCGATGTCGTCGGAGCGACGGAGCCCGAGCGGGGTGTTGGAGGTGACATGCTTGAGCTATACAAGCAATGATACAGCAGTTGGGTCATGTGCTAACTCAGATGCTACAAAGAGGAGGAGATTGAACAGACCCTGTGAAGTAAATTTTTGA | 948 | 47.26 | MAPYYLRTHRNRSHRRGASDGLPFISDECLIEMVKKETHHLPLDGYLGKFHSGDLDVRARTEAVDWIKKVSTHFRFGPLCIYLAVNYLDRFLSAYDLPKGKAWTMQLLAVACMSLAAKLEETEVPLSLDLQVGGSKFVFEARTIERMELLVLTTLGWRMQAVTPFSFIDHYLQKIHDDEFSLEMSIGQSSHLLLNIIHGIEFLEFKPSEIAAAVAISVAGEAQSVDPDRAIHLLIQQLQMERVLKCLKLIDDMFVCRGGSGKGSRASMSSERRSPSGVLEVTCLSYTSNDTAVGSCANSDATKRRRLNRPCEVNF | 315 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 2638096 | 2639932 | - | Cp4.1LG11g04660.1 | Cpe11g00467 | 477261 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe11g00467 | 315 | SMART | cyclin_7 | 65 | 153 | IPR013763 | - | |
Cpe11g00467 | 315 | CDD | CYCLIN | 60 | 152 | IPR013763 | - | |
Cpe11g00467 | 315 | PANTHER | CYCLINS | 14 | 306 | IPR039361 | - | |
Cpe11g00467 | 315 | SUPERFAMILY | Cyclin-like | 24 | 159 | IPR036915 | - | |
Cpe11g00467 | 315 | PANTHER | CARBOXY-TERMINAL DOMAIN CYCLIN | 14 | 306 | - | - | |
Cpe11g00467 | 315 | Pfam | Cyclin, N-terminal domain | 33 | 159 | IPR006671 | - | |
Cpe11g00467 | 315 | ProSitePatterns | Cyclins signature. | 60 | 91 | IPR006671 | - | |
Cpe11g00467 | 315 | Pfam | Cyclin, C-terminal domain | 162 | 257 | IPR004367 | - | |
Cpe11g00467 | 315 | Gene3D | - | 43 | 160 | - | - | |
Cpe11g00467 | 315 | Gene3D | - | 32 | 247 | - | - | |
Cpe11g00467 | 315 | SUPERFAMILY | Cyclin-like | 145 | 254 | IPR036915 | - | |
Cpe11g00467 | 315 | SMART | Cyclin_C_2 | 162 | 287 | IPR004367 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe11g00467 | Cpe-Chr11:2638096 | Cpe11g00745 | Cpe-Chr11:5841771 | 4.93E-56 | dispersed | |
Cpe10g00541 | Cpe-Chr10:3185468 | Cpe11g00467 | Cpe-Chr11:2638096 | 3.35E-87 | wgd | |
Cpe11g00467 | Cpe-Chr11:2638096 | Cpe19g00744 | Cpe-Chr19:5745874 | 1.05E-95 | wgd | |
Cpe11g00467 | Cpe-Chr11:2638096 | Cpe07g00182 | Cpe-Chr7:1142682 | 2.32E-139 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe11g00467 | K18810 | - | csv:101216206 | 508.064 |