Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe11g00491 ATGGCCACCGCCGTGCCGGAAAATCTCTCTCGTGAGCAATATGTGTACCTAGCAAAGCTTGCCGAGCAGGCCGAAAGATATGAGGAGATGGTTCAGTTTATGCAGAAACTTGTTCTTGGTTCAACCCCAGGCTCCGAGCTCTCTGTGGAGGAGCGAAATCTTCTCTCTGTCGCTTACAAGAACGTGATTGGCTCACTTCGAGCCGCTTGGCGGATTGTCTCTTCCATCGAGCAGAAGGAGGAGAGCCGTAAGAATGAAGAGCATGTTGTTCTTGTTAAGGATTATAGATCAAATGTTGAGACTGAGCTTTCCGAGGTCTGTGCGAGTATTTTGAAGCTTTTGGACTCGAATCTTATTCCCTCCGCCACTGCTAGTGAGTCTAAGGTCTTCTACTTGAAGATGAAGGGGGATTACCATAGGTATTTGGCGGAGTTTAAGGTTGGGGATGAGAGAAAAACCGCTGCTGAGGATACGATGCTGGCTTATAAGGCTGCTCAGGATGTTGCAGCTGCAAATCTTGCACCCACTCATCCGATTAGGCTGGGGTTGGCACTCAATTTCTCTGTATTTTACTTCGAGATTCTGAATCAGTCCGACAAAGCTTGTAGCATGGCCAAGGAGGCATTTGAGGAAGCCATTGCTGAGCTAGATACTTTGGGTGAAGAATCATACAAGGACAGACCAGTTAGACGAGTCATAGAAGGCACCATAAGCTCGACCACCTGTCCTGTGGTTGTGGGGGGGAAGAGGGTGTATGGAGGTGGGCTTCAAATGTCATTTGCTTATAATAGCTATTTTAAATGTGTGAATTTGGAAATTAAACGCATTAGTCTGTGA 837 46.95 MATAVPENLSREQYVYLAKLAEQAERYEEMVQFMQKLVLGSTPGSELSVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEESRKNEEHVVLVKDYRSNVETELSEVCASILKLLDSNLIPSATASESKVFYLKMKGDYHRYLAEFKVGDERKTAAEDTMLAYKAAQDVAAANLAPTHPIRLGLALNFSVFYFEILNQSDKACSMAKEAFEEAIAELDTLGEESYKDRPVRRVIEGTISSTTCPVVVGGKRVYGGGLQMSFAYNSYFKCVNLEIKRISL 278
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2844411 2848080 + Cp4.1LG11g04890.1 Cpe11g00491 477285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe11g00491 278 Coils Coil 17 37 - -
Cpe11g00491 278 Gene3D - 1 229 IPR036815 -
Cpe11g00491 278 Pfam 14-3-3 protein 17 226 IPR023410 -
Cpe11g00491 278 PRINTS 14-3-3 protein zeta signature 126 148 IPR000308 -
Cpe11g00491 278 PRINTS 14-3-3 protein zeta signature 215 244 IPR000308 -
Cpe11g00491 278 PRINTS 14-3-3 protein zeta signature 161 187 IPR000308 -
Cpe11g00491 278 PRINTS 14-3-3 protein zeta signature 95 119 IPR000308 -
Cpe11g00491 278 PRINTS 14-3-3 protein zeta signature 46 75 IPR000308 -
Cpe11g00491 278 PRINTS 14-3-3 protein zeta signature 188 214 IPR000308 -
Cpe11g00491 278 SUPERFAMILY 14-3-3 protein 10 226 IPR036815 -
Cpe11g00491 278 SMART 1433_4 11 254 IPR023410 -
Cpe11g00491 278 PANTHER 14-3-3 PROTEIN 8 227 IPR000308 -
Cpe11g00491 278 ProSitePatterns 14-3-3 proteins signature 1. 52 62 IPR023409 -
Cpe11g00491 278 PANTHER BNAC02G00320D PROTEIN 8 227 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe11g00491 Cpe-Chr11:2844411 Cpe03g00956 Cpe-Chr3:7368376 9.58E-120 dispersed
Cpe11g00491 Cpe-Chr11:2844411 Cpe07g00156 Cpe-Chr7:916270 2.83E-153 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe11g00491 K06630 - csv:101222827 419.468