Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe11g00543 ATGAAAAAAGAAACCCCAGCTGGACGAACGTTCTCGAGTTGGCTCAAAGTTGTAAAAACTGGAAAAAGGGAAGAAAGAAGAAGGAAGATGAAGTTGGATGAAAACAGACAGCTTCCAAATTTCCCAATTAGTTTGGTGGAAAAGAAAATGGAGAAATCCACCAACGAAACAGCCCCCGCAAATCATGCCTCTCGTTCGAATTCCAGATGCCTCTCCGCTCTTATTTCTCGACCATCTTCCTTCCTTCTTCTCCGACACACAGCGGCAATCCAGACAGAGCTTGCTTTGCTTCTTGCTTTTGCCGGAACAAGGAGATTTTGGGGAGGCGGTCGCCGGAAATCAATTGGTGAGAAATGTGGACTCATAATAAGGAAAAGAAGGAGGCGGTCACCGGAAATCAATTGGTGGGAATCGCCATTGATAAGGACAAAGGAAGTCAAGTTGCTCTCAAATGGGCCACTGAGAATCTCCTTCTCAAGGGCCAAACTGCCATTCTCATCCATGTCAAACTCAGACCTTCCTCCCATTCTGGCTCGTTCCTGTCTTCTCCTAGTGTCTTGCAAAGACATCGTCATAGAAGATGTAGATGTTGGAAAAGCACTGATCGAATATGTCTCTCAGGCTGGAATTGATCATTTGGTTGTCGGTGCCACGACTAGAAGTGGCTTTTTGAGATTCAAGACGATAGATATTCCGGGCAGTGTTATCAAAGGAGCACCAGACTTCTGCAATGTTTATGTCATATCAAGAGGGAAAATCCAAAATATGCGAACGGCGTCACGTCCTGCTCCTGCTTCTTCTCCTCTTCGAAGTTTATTGCTGAGCCAATCTGGTGTTGGATCACATTCAGCTGAATCACAATTTCCTCATATCGAAACTACGAGACCCGAAAAGCCTCCCCTCGAAGCAGCACGCCGATCTCAGGACAACTCCGAGTTCAGGTCACCGTTCACTAGGAAAGGCTACCATGGAAAAATGCCAGGGGAAATCAGTCTGCCAGATACCGATATTTCTTTTGTTAGCTCGGGAAGGCCGAGTGTTGACCGATTGTTCCCTGCATTATTTGACACCCCAGATTCAGGAAGGACTCCCCCACGACTGTCCAGTGGCAACGATTCTGATATATATGTTAGCTTTGAGTCACAGCAGTTCGGACGTAAATCATTGGATGTAAACTATCCACCTGAATTTTCATCGATGTTATCAGAGGATGATAGATTATCGACTTCGTCACAGAGTATGGAAGAAGTAGAGGCTGAGATGAGGAGGCTGAAGCTGGAACTAAAGCAAACTATGGAAATGTATAGCACAGCCTGCAAGGAAGCAATTACAGCTAAACAAAAGGCGGTAGAGCTTCAGCGATGGAAATCCGAGGAAGAACAGAGATTAGAGGAGGCGAGACATGCAGAGGAAGCTGCATTAGCGATTGTCGAGCAGGAAAAGGCGAAGTCTCGAGCTGCTATGGAGGCAGCTGAAGCATCTAAAAGGATCGCTGAGTTGGAAGCACGGAAGAGAATTAATGCCGAAATGAAAGCATTCAAGGAAGCAGATGAGAAGAAGAAGGCATTAGATGCTTTGGCAAACCAAGACGTCAGGTATCGGAGGTACTCGATCGAGGAGATCGAAGCTGCTACCGAGTTATTTTCAGAATCTTTAAAGATTGGAGAGGGAGGTTATGGGCCTGTTTATAAAGGTTATTTAGACCACACACCAGTTGCAATTAAGGTATTACGTCCCGATGCGGCTCAAGGAAGGTCACAGTTCCAGAAAGAGGTCGAAGTACTTAGCTGCATACGACATCCGAACATGGTTCTTCTCCTTGGAGCATGCCCTGAATATGGCTGCTTGGTCTATGAGTTTATGGGACATGGTAGCTTGGATGACTGCCTCTTTCGCCGGGGCAATAACTCGAGACCTCTTTCTTGGCAACGTAGATTCAAAATTGCAGCTGAAATCGGCACTGCCTTGTTGTTCCTCCACCAGACTAAGCCTGAACCGCTCGTGCACCGTGATTTGAAGCCAGGCAACATCTTGCTCGATAATAACTACGTTAGCAAGATTAGCGATGTCGGTTTGGCTAGGCTTGTTCCCCCATCTATAGCAGACAGTGTGACACAATATCGAATGACTTCAACCGCTGGCACGTTCTGTTATATCGATCCCGAGTATCAACAAACTGGCATGCTCGGTGTAAAATCCGACATATATTCTTTGGGGATCATGTTTTTGCAGCTGATTACAGCAAAGCCACCCATGGGATTGACTCACCATGTGGAAAGAGCTATTGAGAACGGGACTTTGTCTGAAATTCTTGATCCATCTGTTACTGATTGGCCAGCTGAAGAAACCTCCTCCTTTGCAGAGTTGGCTTTAAAATGTGCAGAGTTGAGAAGGAAAGATCGACCCGATCTTTGTAAGGTCGTTCTCCCCGAACTCATCAAATTACAATCGCTAGCCGAAGCCAGCATGTACTCGTCGGCGAGGGACGGCGTTAGCAGCCCTAATTAC 2508 46.41 MKKETPAGRTFSSWLKVVKTGKREERRRKMKLDENRQLPNFPISLVEKKMEKSTNETAPANHASRSNSRCLSALISRPSSFLLLRHTAAIQTELALLLAFAGTRRFWGGGRRKSIGEKCGLIIRKRRRRSPEINWWESPLIRTKEVKLLSNGPLRISFSRAKLPFSSMSNSDLPPILARSCLLLVSCKDIVIEDVDVGKALIEYVSQAGIDHLVVGATTRSGFLRFKTIDIPGSVIKGAPDFCNVYVISRGKIQNMRTASRPAPASSPLRSLLLSQSGVGSHSAESQFPHIETTRPEKPPLEAARRSQDNSEFRSPFTRKGYHGKMPGEISLPDTDISFVSSGRPSVDRLFPALFDTPDSGRTPPRLSSGNDSDIYVSFESQQFGRKSLDVNYPPEFSSMLSEDDRLSTSSQSMEEVEAEMRRLKLELKQTMEMYSTACKEAITAKQKAVELQRWKSEEEQRLEEARHAEEAALAIVEQEKAKSRAAMEAAEASKRIAELEARKRINAEMKAFKEADEKKKALDALANQDVRYRRYSIEEIEAATELFSESLKIGEGGYGPVYKGYLDHTPVAIKVLRPDAAQGRSQFQKEVEVLSCIRHPNMVLLLGACPEYGCLVYEFMGHGSLDDCLFRRGNNSRPLSWQRRFKIAAEIGTALLFLHQTKPEPLVHRDLKPGNILLDNNYVSKISDVGLARLVPPSIADSVTQYRMTSTAGTFCYIDPEYQQTGMLGVKSDIYSLGIMFLQLITAKPPMGLTHHVERAIENGTLSEILDPSVTDWPAEETSSFAELALKCAELRRKDRPDLCKVVLPELIKLQSLAEASMYSSARDGVSSPNY 836
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 3218026 3223245 + Cp4.1LG11g05400.1 Cpe11g00543 477337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe11g00543 836 Gene3D Transferase(Phosphotransferase) domain 1 621 829 - -
Cpe11g00543 836 ProSitePatterns Serine/Threonine protein kinases active-site signature. 667 679 IPR008271 GO:0004672|GO:0006468
Cpe11g00543 836 SUPERFAMILY Protein kinase-like (PK-like) 531 808 IPR011009 -
Cpe11g00543 836 Coils Coil 460 503 - -
Cpe11g00543 836 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 34-LIKE 185 834 - -
Cpe11g00543 836 MobiDBLite consensus disorder prediction 280 329 - -
Cpe11g00543 836 CDD STK_N 185 251 - -
Cpe11g00543 836 Pfam Protein kinase domain 550 807 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe11g00543 836 Coils Coil 407 434 - -
Cpe11g00543 836 MobiDBLite consensus disorder prediction 354 373 - -
Cpe11g00543 836 PANTHER OS02G0152300 PROTEIN 185 834 - -
Cpe11g00543 836 MobiDBLite consensus disorder prediction 291 319 - -
Cpe11g00543 836 ProSiteProfiles Protein kinase domain profile. 548 813 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe11g00543 836 Gene3D Phosphorylase Kinase; domain 1 526 620 - -
Cpe11g00543 836 SMART serkin_6 548 813 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe07g00774 Cpe-Chr7:6846738 Cpe11g00543 Cpe-Chr11:3218026 0 dispersed
Cpe11g00543 Cpe-Chr11:3218026 Cpe11g00655 Cpe-Chr11:4355648 0 dispersed
Cpe15g00574 Cpe-Chr15:6569374 Cpe11g00543 Cpe-Chr11:3218026 4.82E-76 dispersed
Cpe11g00543 Cpe-Chr11:3218026 Cpe02g00393 Cpe-Chr2:2180776 1.38E-84 wgd
Cpe11g00543 Cpe-Chr11:3218026 Cpe06g00402 Cpe-Chr6:2284190 7.69E-88 wgd
Cpe11g00543 Cpe-Chr11:3218026 Cpe07g00241 Cpe-Chr7:1560646 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62711 PF00069 Pkinase 2.40E-39 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe11g00543 - - csv:101214468 1044.26