Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe11g00545 ATGACGGCACCGGTGTTGGTTGATGGGAAGGGGAAGGGGAAGAAGAATATTGAGAATTTGGTGTCTGCTACTAGGTCGTTGAAGGCTAGTTTAGAGAAATCTAGGGCTCTAGGATTTGCGTTGCAGAAAGCTGGGTCGAGATTGGAGGAGATTAGCCAAAGATTGCCGACTTTAGAAGCGGCTGTTCGGCCTATTCGTGCTGATAAGGAAGCTCTCGTCGCCGTCGGTGGCCATATAAACCGTGCTGTTGGCCCTGCGGCGGCGGTGCTTAAGGTTTTTGATGCTGTTCATGGCCTTGAAAAGTCTCTGTTATCGGACCCGCGGAATGATCTCCCTGGTTATTTGTCGGTGTTGAAACGTATGGAAGAGGCATTGAGATTCTTGGGAGATAACTGTGGGCTGGGAATCCAGTGGTTGGAGGACATAGTTGAGTATTTGGAAGATAATACTGTGGCTGATGAGAAATATCTTGGGAGTTTGAAGAACTCGTTGAAGAAACTGAGGGATTTACAGAGTGATGAGGAGAAGACTGAGCTTGATGGAGGCCTTTTGAATGCTGCTTTAGATAAACTAGAGAACGAGTTTAGGCGTCTGTTAACGGAGCACAGCGTTCCCCTTCCCATGTCTTCTGCAGCGTCTGTCGGTGAGCAAGCTTGCATTGCTCCATCTCCATTGCCTGTGACTGTTATTCACAAACTTCAAGCCATTCTTGGGAGATTGATTGCTAATAAACGACTCGAACGATGCATATCCATTTACGTTGAAGTTCGTAGCTCTAACGTTAGGGCTAGTTTGCAGGGTCTTGGTTTGGATTACTTGGAGATATCGGTTTCCGAGTTCAATGATGTACAGAGCATCGAAGGGTACATTGCGAAATGGGGAACGCATTTGGAGTTTGCAGTGAAACATTTGTTTGAAGCTGAATTCAAGCTTTGTAATGATGTTTTTGAGAGGATAGGATTGGATGTTTGGATGGGCTGTTTTGCAAAGATAGCAACTCAAGCTGGTATTCTTGCATTTCTTCAATTTGGGAAAACTGTTACAGAAAGCAAGAATGATCCTATTAAGCTATTGAAGTTGTTAGATATCTTTGCATCCTTGAACAAACTGAGACTCGACTTTAATAGGCTGTTCGGCGGGGCTGCCTGTTTGGAAATTCAAAACTTGACTCGAGATCTAATTAAGAGGGTTATCGATGGCGTAGCCGAGATTTTCTGGGAACTTCTAGTTCAGGTGGAGCTCCAGAGGCAAAATCCTCCACCTTTAGATGGGGCAGTTCCAAGGTTGGTTAACTTCATTATCGATTACAGTAATAAACTGCTCAGCGATGGTTATCGGCCGATCCTGACCCAGGCCCTCGTCATTCACCGGAGTTGGAAGAAAGAAAAGTTCCAAGAGGCTCTTCTTGTCGGTGAGGTAACGAACCTTGTCAAAGCCATTGAGCAGAATCTGGACACTTGGATAAAGGCTTATGAAGATTCGACCTTGTCGAACTTTTTCGCTATGAACAATCATTGGCATCTATACAAGCACCTCAAAGGAACGAAAGTCGGGGAACTAATGGGAGACAAAGTAAAGGAACATGAACAGTACAAGGATTACTATGCTGCAGTTTTCTTGAGGGATAGCTGGAGTAAACTTCCTAGTCATTTAAGCAGGGAGGGTTTGATTATGTTCTCGGGTGGACGAGCAACTGCTCGCGATCTTGTTAAGAAACGTTTAAAGACATTCAATGAAGCTTTTGAAGACATGTACAAGAAGCAGTCAAACTGGGTTATAACTGACAGAGAATTGAGGGAGAAGACATGCCAACTTATCGTTCAAACCATCGTGCCCGTTTACCGTAGCTATATGCAAAATTATGGCCCTCTGGTCGAGCAAGACGCAAGTTCGAGTAAGTATGCGAAGTACACCGTGCAGAATCTGGAGAAAATGTTGCTGTCCCTCTTTCACCCAAAGCCGCTTCGGTACAGCAGCCTCAAAGTTAGGCAGACTAGTGGGAAATTCGGCAATGGCGCCGCAGATCATCGTCGTTCCAACTCCATGGTTCTGTGA 2055 45.26 MTAPVLVDGKGKGKKNIENLVSATRSLKASLEKSRALGFALQKAGSRLEEISQRLPTLEAAVRPIRADKEALVAVGGHINRAVGPAAAVLKVFDAVHGLEKSLLSDPRNDLPGYLSVLKRMEEALRFLGDNCGLGIQWLEDIVEYLEDNTVADEKYLGSLKNSLKKLRDLQSDEEKTELDGGLLNAALDKLENEFRRLLTEHSVPLPMSSAASVGEQACIAPSPLPVTVIHKLQAILGRLIANKRLERCISIYVEVRSSNVRASLQGLGLDYLEISVSEFNDVQSIEGYIAKWGTHLEFAVKHLFEAEFKLCNDVFERIGLDVWMGCFAKIATQAGILAFLQFGKTVTESKNDPIKLLKLLDIFASLNKLRLDFNRLFGGAACLEIQNLTRDLIKRVIDGVAEIFWELLVQVELQRQNPPPLDGAVPRLVNFIIDYSNKLLSDGYRPILTQALVIHRSWKKEKFQEALLVGEVTNLVKAIEQNLDTWIKAYEDSTLSNFFAMNNHWHLYKHLKGTKVGELMGDKVKEHEQYKDYYAAVFLRDSWSKLPSHLSREGLIMFSGGRATARDLVKKRLKTFNEAFEDMYKKQSNWVITDRELREKTCQLIVQTIVPVYRSYMQNYGPLVEQDASSSKYAKYTVQNLEKMLLSLFHPKPLRYSSLKVRQTSGKFGNGAADHRRSNSMVL 684
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 3235711 3237765 + Cp4.1LG11g05410.1 Cpe11g00545 477339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe11g00545 684 Gene3D Exocyst complex component Exo70 140 657 - -
Cpe11g00545 684 PANTHER EXOCYST COMPLEX PROTEIN EXO70 16 672 IPR004140 GO:0000145|GO:0006887
Cpe11g00545 684 Pfam Exo70 exocyst complex subunit 292 647 IPR046364 GO:0000145|GO:0005546|GO:0006887
Cpe11g00545 684 SUPERFAMILY Cullin repeat-like 89 651 IPR016159 -
Cpe11g00545 684 Coils Coil 160 180 - -
Cpe11g00545 684 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 16 672 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe11g00545 Cpe-Chr11:3235711 Cpe12g00541 Cpe-Chr12:5545982 0 dispersed
Cpe11g00545 Cpe-Chr11:3235711 Cpe07g00257 Cpe-Chr7:1665689 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe11g00545 K07195 - csv:101207478 1257.28