Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe11g00595 | ATGGCTTTTCTAGAGGTAAAACAGAAACTCCTACGCGAGATTGAAGATCTAGGATTCCCAAGGGCCCGAGTTGTCCGAGCACTTCATAGTACTGGGAATGTCAGCACTGAAGCTGCAATTAATTGGCTCATTGATCATGAGAATGATCCAGATATAGATCAAATGCCCCTGGTAGCAATAGAGATTGATCTTGAATCTCCTGAACCATTTCATATCACAGAGGAAATGAAAAGAAAGGCTAAGGAACTAAGGGATCATGTACGGAAAGAAAAAGAAGAAGAAGAAAAAAAGTTAGAAAGACAGAGGGAGAAGGACAGAATTCGTTCTGGTAAAGAATTACAAGAAGCAAAAAGAACCGCAGAAGAAGCTGAACGGAAACGCTATATAGACTCTAGGCAAGCTGATAAACAGGAGGAGAAGAGAGCAAGGGAAAAAGTTCTACAAAAACTTGAACAAGATAAGATAGAAAGAAGGAGGAATAGTGGAATGCTCTCTGAAAGGTCTGAAAGCCTTGATACAAAATCTAACGCCACCGAAGCAGGGAAAAAGGATGAACTTAGATCGCAGAATTCACTGCCAGCAACTTCAGTTAGTAAAGCAGTTTCTATGAGAGAATGCTTAAGGTCTCTTAGGCGCCATCAAAAGGATGATTCTGATAAAGTGAGAACTGCCTACCGAACCCTCTTTATCTATGTCAGAAATGTAGCCAAAAATCCTGATGAGGAAAAGTTTAGGAAGATTCGACTCAGTAACCCTTTGTTCCAGGAGAGAGTTGGGAGTTTGAAAGGAGGGATAGAGTTTCTGGAGCTTTGCGGGTTTGAGAGAGGAGGAGAGTTTCTGTACCTTCCCCGGGATAAAGTCGACCGGGGGGCTTTAGTCACTGCTGGATCACTGTTGAAATCTGCAATGACAAACCCCTTTTTTGGTGCAATATAA | 936 | 41.99 | MAFLEVKQKLLREIEDLGFPRARVVRALHSTGNVSTEAAINWLIDHENDPDIDQMPLVAIEIDLESPEPFHITEEMKRKAKELRDHVRKEKEEEEKKLERQREKDRIRSGKELQEAKRTAEEAERKRYIDSRQADKQEEKRAREKVLQKLEQDKIERRRNSGMLSERSESLDTKSNATEAGKKDELRSQNSLPATSVSKAVSMRECLRSLRRHQKDDSDKVRTAYRTLFIYVRNVAKNPDEEKFRKIRLSNPLFQERVGSLKGGIEFLELCGFERGGEFLYLPRDKVDRGALVTAGSLLKSAMTNPFFGAI | 311 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 3562436 | 3567363 | + | Cp4.1LG11g05890.1 | Cpe11g00595 | 477389 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe11g00595 | 311 | ProSiteProfiles | Ubiquitin-associated domain (UBA) profile. | 5 | 46 | IPR015940 | - | |
Cpe11g00595 | 311 | MobiDBLite | consensus disorder prediction | 83 | 165 | - | - | |
Cpe11g00595 | 311 | MobiDBLite | consensus disorder prediction | 83 | 197 | - | - | |
Cpe11g00595 | 311 | Pfam | UBA/TS-N domain | 11 | 43 | IPR015940 | - | |
Cpe11g00595 | 311 | Pfam | PUB domain | 219 | 289 | IPR018997 | - | |
Cpe11g00595 | 311 | CDD | UBA_PUB_plant | 5 | 53 | - | - | |
Cpe11g00595 | 311 | SMART | PGNneu | 223 | 284 | - | - | |
Cpe11g00595 | 311 | MobiDBLite | consensus disorder prediction | 172 | 186 | - | - | |
Cpe11g00595 | 311 | Gene3D | - | 8 | 53 | - | - | |
Cpe11g00595 | 311 | SUPERFAMILY | PUG domain-like | 200 | 307 | IPR036339 | - | |
Cpe11g00595 | 311 | Coils | Coil | 73 | 126 | - | - | |
Cpe11g00595 | 311 | Gene3D | - | 205 | 299 | - | - | |
Cpe11g00595 | 311 | PANTHER | F13M7.16 PROTEIN | 1 | 310 | - | - | |
Cpe11g00595 | 311 | Coils | Coil | 133 | 156 | - | - | |
Cpe11g00595 | 311 | SUPERFAMILY | UBA-like | 5 | 56 | IPR009060 | GO:0005515 | |
Cpe11g00595 | 311 | PANTHER | UBX DOMAIN-CONTAINING PROTEIN 1-LIKE | 1 | 310 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe01g01835 | Cpe-Chr1:15607781 | Cpe11g00595 | Cpe-Chr11:3562436 | 3.69E-08 | dispersed | |
Cpe11g00595 | Cpe-Chr11:3562436 | Cpe13g00353 | Cpe-Chr13:3569584 | 3.52E-08 | dispersed | |
Cpe17g00305 | Cpe-Chr17:2068622 | Cpe11g00595 | Cpe-Chr11:3562436 | 1.08E-109 | transposed | |
Cpe11g00595 | Cpe-Chr11:3562436 | Cpe07g00838 | Cpe-Chr7:7602638 | 3.94E-145 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe11g00595 | - | K24348 | csv:101210384 | 477.248 |