Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe11g00598 ATGGATAGCCCTTTGACATCGATCTCAGCCCCTAATTCCTCACCTGTTTCGAATCCTGGTTCGAATGATGAAAACCCGCGTGTTAAATTCCTGTGCAGCTTCTTGGGAAGTATAATGCCTCGCCCCCAAGATGGCAAGCTTCGTTATGTTGGGGGAGAGACAAGGATTGTGAGTGCTCCGAGGGATATTACATATGAGGAGTTGATGGTTAAGATGAGGGAACTTTATGATGGGGCTGCAGTGTTGAAGTACCAGCAACCAGATGAGGATCTTGATGCTCTTGTGTCTGTTGTCAATGATGATGATGTGATTAACATGATGGAAGAGTATGATAAGGTGGGTTCGGGTGACGGATTCACTAGGCTCAGGATATTCTTGTTTTCGAATCCGGAACAAGAATGTTCCTTGCCTTTTGTGGATGGGGATGAGAGGGATACTGAGAGGCGATATGTAGATGCTCTTAATAATTCAAATGATGTGAATGATTTTGTTCGACAACAGCAGCCAGATTCCCCTGTAATTAGTGGCATAGATGATGTGCACGGGATAGAACATTTTTTGAACCCAATGAATATTGAAGGTAGTCTTCACACCCAGAGGAGTTGTGAGCCCTTGTCACAATATCAGCTGCATCAGCTCGCAGTCCCTTATATTGGATCTGGGCAGCAACAACAATCCGTGGCTCAAAGGTATAGTGAAATGGAAGCTCCATGGAGTCCTGCTTTCGTTTCACCCAGGCATCCTGGTCTGTATGATCCAAGACCAGTGGGAGAATATCCATCTTCTCCATCTGCGTGGTACCGTCTGCCATTCCCTGAGTTTCCAGATAAATACTTTGAAAGAATGCCTGAAGACTACACCAGGGAGCAAATGAATCACCAGTATATGTATGAACATCAACCACAATCTAATGAGAACATTGTCTGGCTGCCAAATGGACCTATTAGTGAAAAGTCAGGTTTCCCTGGTAATATATTACACGGACATGGTGTTCCTGATGGGAATAGTTCTTGTGAACACTGTCGATCAAATTATCATCGGTATCAAACACACATGGAGCAAGCTAATATGTTAAATGGACTTCCTCATGAATACTCTCAGAATAGGGAGGCATTGATGCAAAAGGCTGACACGAAGTTCCATCATGGTATTTTCCCAAATGAGCAGAATATTAATGATCCTCGATCTGCTTATAACGAGACACCACCCCATGAGAGAGGATGGATTGTGCAACACCAGATGAGCGTGCGGGGGGATGACACGAGAACATATGTTTCTGGGGCTGGACGATTGAATGATCACTACATTGTGGATGGTTCTGGCTCAAATTTTCCTCCTACACAAAGTAATATAACTGATGGCTACCAAGCTTCCATGAATTTTCATGATGAGGTATTTCGTGACCAGGTTGTGCCTAGTGGGCAACATATGTGTGTTCCTCCTCCTGAAGATCGTGGTGTTGGTTATATGAATATGCCTTATGGATATGGAGCAGATCCTCAATATCCTCCTGTGGCACACAGGCATATGCCTGGAAATGCTGCCTGGCGAAATGTTCAGAACCCGTCACATGTTGCTCCTCCTTATGAAGCATCTGTTTCCATTCAGCAAGGGAATGTGACTGTTAATCCAGGATATATCAGAGCCATGCAGGAGGGTAGCCCCCGCATTCATATTGGTACGGACCATCAAAATCCTTGGCATGAATCCTCACAGAAAATGTTGGGTATTGAGGGAGCAACTGGTTCAGAGCATTTACCTGCACTTGTTTTGAAGACCAATTCGACCATGGTTGGCCATGACAACCAACAATTCACAAATTTAGAACATATCCAACCACATCTAGATAAGATAAACCTCATCGCTTCTCCTTTGCAGAGATCAGATTCATCTTCAGCATTTATTCATGAAAAAATGGTTTCACCTTTTAATCCTAGCCAAAATCCACAACCGAGGACTGTTAGTGTGATTAATGAAGCTATGATGATGGAAAGGAAAATTGTGCCTGGGGAAGGAAACGAACACATGATAACTGATATGGGGGAAGCTGACATTTCTGAAGCAGGCCTTGTATCTCATCCAGAGCAGAATAACACTGATGATACATATTCCAAGGATGTACCCCCTGAATCGTTAAATTCAAATTGCACGAACACTCCAGTAGATAATGGTGATGACTTGAAATCTGATGTAGAGACTCTTGAAAATCCAAAACTATCTGTCAGCCGTCTGAGTTTCTTACCTGAGTTGATTGCATCTGTGAAAAGAGCAGCATTAGAAGTATCTGAAGAGGCAATGGTTGAAGAAACCGCTCTAAGGACACCTGATTCAATAGGAAAAAAAGAGACAGCTAATGAGCTAGGCTCCTTGAACGCCCATGGGGAACCTGAGTTGGAAACTGGGAGTGAGAATCAAAGCTCCACAATTGAGCCAACAAAGGCTGAAGAAGAAGCCATTTCAAGAGGATTACAAACGATTAACAATGATGATCTGGAGGAGATTCGTGAACTAGGGTCTGGGACTTATGGTGCTGTTTATCATGGGAAATGGAGAGGTTCTGATGTTGCAATAAAGAGGATAAAAGCTAGCTGTTTTGCTGGACGACCCTCAGAAAGGGAACGTCTGATTGCAGATTTTTGGAAGGAAGCTTTGATATTAAGTTCCTTACACCATCCAAATGTTGTTTCCTTCTATGGTATTGTTCGTGATGGTCCTGATGGTTCCTTAGCAACAGTGACAGAATTCATGGTAAATGGATCATTGAAACAGTTTTTGCACAAGAAGGACAGTGAGTCGTACTGGGATTGTGATCGTAAATACTACCTTTTCTATAGGACAATTGATCGTCGTAAGAGACTAATTATAGCCATGGATGCTGCATTTGGGATGGAATATTTGCATGGGAAGAATATTGTACATTTCGATTTGAAATGCGAAAACCTTTTAGTGAATATGAGAGATCCTCAGAGGCCTGTTTGCAAGATCGGTGATTTGGGATTGTCGAAGGTGAGACAACACACGTTAGTATCGGGAGGGGTTCGTGGAACTTTACCCTGGATGGCACCCGAGCTTCTTAGTGGGAAAAGCAACATGGTGACAGAGAAGATTGATGTTTACTCATTTGGGATTGTTATGTGGGAAGTACTCACGGGAGATGAACCGTATTCAGATATGCATTGTGCTTCTATAATCGGAGGAATCGTAAACAATTGTTTACGTCCAGAAATCCCGACATGGTGCGACCCGGAATGGAAGGCTTTAATGTCAAGCTGCTGGGACTCAGACCCAGCTATGAGACCATCATTTTCAGAAATTTCTCAGAAGCTAAGGAATATGGCAGCTGCAATGAATGTGAAATACATAATTTTTGAAACTTTACGGCCGCCTGCTGATGATTCTCAAAGTATAAGAAGGCTATTAGATGTGATATCATTCTCTTGTGGAATCCTTTTCGTGTTCTATACACTGCATTGCTGGGAGACTACAAGTACAGATATGAAGGAGATCCATGATAGGCAATGGGAATGTAAGCCTAAGCCTTCTCTTTTCCTCTTCTTTTCGACTTCGACTTCACCTGGGAGTTCGGCGTTGGAAGCATACGCCATACGGTACGATACGGTACATTTGCCATGA 3633 43.13 MDSPLTSISAPNSSPVSNPGSNDENPRVKFLCSFLGSIMPRPQDGKLRYVGGETRIVSAPRDITYEELMVKMRELYDGAAVLKYQQPDEDLDALVSVVNDDDVINMMEEYDKVGSGDGFTRLRIFLFSNPEQECSLPFVDGDERDTERRYVDALNNSNDVNDFVRQQQPDSPVISGIDDVHGIEHFLNPMNIEGSLHTQRSCEPLSQYQLHQLAVPYIGSGQQQQSVAQRYSEMEAPWSPAFVSPRHPGLYDPRPVGEYPSSPSAWYRLPFPEFPDKYFERMPEDYTREQMNHQYMYEHQPQSNENIVWLPNGPISEKSGFPGNILHGHGVPDGNSSCEHCRSNYHRYQTHMEQANMLNGLPHEYSQNREALMQKADTKFHHGIFPNEQNINDPRSAYNETPPHERGWIVQHQMSVRGDDTRTYVSGAGRLNDHYIVDGSGSNFPPTQSNITDGYQASMNFHDEVFRDQVVPSGQHMCVPPPEDRGVGYMNMPYGYGADPQYPPVAHRHMPGNAAWRNVQNPSHVAPPYEASVSIQQGNVTVNPGYIRAMQEGSPRIHIGTDHQNPWHESSQKMLGIEGATGSEHLPALVLKTNSTMVGHDNQQFTNLEHIQPHLDKINLIASPLQRSDSSSAFIHEKMVSPFNPSQNPQPRTVSVINEAMMMERKIVPGEGNEHMITDMGEADISEAGLVSHPEQNNTDDTYSKDVPPESLNSNCTNTPVDNGDDLKSDVETLENPKLSVSRLSFLPELIASVKRAALEVSEEAMVEETALRTPDSIGKKETANELGSLNAHGEPELETGSENQSSTIEPTKAEEEAISRGLQTINNDDLEEIRELGSGTYGAVYHGKWRGSDVAIKRIKASCFAGRPSERERLIADFWKEALILSSLHHPNVVSFYGIVRDGPDGSLATVTEFMVNGSLKQFLHKKDSESYWDCDRKYYLFYRTIDRRKRLIIAMDAAFGMEYLHGKNIVHFDLKCENLLVNMRDPQRPVCKIGDLGLSKVRQHTLVSGGVRGTLPWMAPELLSGKSNMVTEKIDVYSFGIVMWEVLTGDEPYSDMHCASIIGGIVNNCLRPEIPTWCDPEWKALMSSCWDSDPAMRPSFSEISQKLRNMAAAMNVKYIIFETLRPPADDSQSIRRLLDVISFSCGILFVFYTLHCWETTSTDMKEIHDRQWECKPKPSLFLFFSTSTSPGSSALEAYAIRYDTVHLP 1210
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 3580815 3587102 + Cp4.1LG11g05880.1 Cpe11g00598 477392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe11g00598 1210 MobiDBLite consensus disorder prediction 790 815 - -
Cpe11g00598 1210 Gene3D - 46 129 - -
Cpe11g00598 1210 SUPERFAMILY Protein kinase-like (PK-like) 818 1107 IPR011009 -
Cpe11g00598 1210 PANTHER SERINE-THREONINE PROTEIN KINASE 18 1119 - -
Cpe11g00598 1210 CDD STKc_MAP3K-like 837 1109 - -
Cpe11g00598 1210 MobiDBLite consensus disorder prediction 798 813 - -
Cpe11g00598 1210 SMART PB1_new 42 127 IPR000270 GO:0005515
Cpe11g00598 1210 ProSitePatterns Protein kinases ATP-binding region signature. 837 858 IPR017441 GO:0005524
Cpe11g00598 1210 SUPERFAMILY CAD & PB1 domains 44 133 - -
Cpe11g00598 1210 Pfam PB1 domain 43 127 IPR000270 GO:0005515
Cpe11g00598 1210 CDD PB1_UP2 31 127 - -
Cpe11g00598 1210 Pfam Protein tyrosine and serine/threonine kinase 832 1109 IPR001245 GO:0004672|GO:0006468
Cpe11g00598 1210 MobiDBLite consensus disorder prediction 1 24 - -
Cpe11g00598 1210 ProSiteProfiles Protein kinase domain profile. 831 1121 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe11g00598 1210 SMART serkin_6 831 1115 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe11g00598 1210 MobiDBLite consensus disorder prediction 692 722 - -
Cpe11g00598 1210 Gene3D Phosphorylase Kinase; domain 1 817 917 - -
Cpe11g00598 1210 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 18 1119 - -
Cpe11g00598 1210 ProSitePatterns Serine/Threonine protein kinases active-site signature. 971 983 IPR008271 GO:0004672|GO:0006468
Cpe11g00598 1210 Gene3D Transferase(Phosphotransferase) domain 1 939 1125 - -
Cpe11g00598 1210 PRINTS Tyrosine kinase catalytic domain signature 965 983 IPR001245 GO:0004672|GO:0006468
Cpe11g00598 1210 PRINTS Tyrosine kinase catalytic domain signature 1080 1102 IPR001245 GO:0004672|GO:0006468
Cpe11g00598 1210 PRINTS Tyrosine kinase catalytic domain signature 913 926 IPR001245 GO:0004672|GO:0006468
Cpe11g00598 1210 PRINTS Tyrosine kinase catalytic domain signature 1036 1058 IPR001245 GO:0004672|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe07g00841 Cpe11g00598 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe11g00598 Cpe-Chr11:3580815 Cpe16g00711 Cpe-Chr16:7264664 1.99E-136 dispersed
Cpe14g00671 Cpe-Chr14:4405118 Cpe11g00598 Cpe-Chr11:3580815 2.83E-29 dispersed
Cpe11g00598 Cpe-Chr11:3580815 Cpe07g00841 Cpe-Chr7:7623623 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62712 PF07714 PK_Tyr_Ser-Thr 6.20E-59 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe11g00598 - - cmax:111492314 2221.82