Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe11g00598 | ATGGATAGCCCTTTGACATCGATCTCAGCCCCTAATTCCTCACCTGTTTCGAATCCTGGTTCGAATGATGAAAACCCGCGTGTTAAATTCCTGTGCAGCTTCTTGGGAAGTATAATGCCTCGCCCCCAAGATGGCAAGCTTCGTTATGTTGGGGGAGAGACAAGGATTGTGAGTGCTCCGAGGGATATTACATATGAGGAGTTGATGGTTAAGATGAGGGAACTTTATGATGGGGCTGCAGTGTTGAAGTACCAGCAACCAGATGAGGATCTTGATGCTCTTGTGTCTGTTGTCAATGATGATGATGTGATTAACATGATGGAAGAGTATGATAAGGTGGGTTCGGGTGACGGATTCACTAGGCTCAGGATATTCTTGTTTTCGAATCCGGAACAAGAATGTTCCTTGCCTTTTGTGGATGGGGATGAGAGGGATACTGAGAGGCGATATGTAGATGCTCTTAATAATTCAAATGATGTGAATGATTTTGTTCGACAACAGCAGCCAGATTCCCCTGTAATTAGTGGCATAGATGATGTGCACGGGATAGAACATTTTTTGAACCCAATGAATATTGAAGGTAGTCTTCACACCCAGAGGAGTTGTGAGCCCTTGTCACAATATCAGCTGCATCAGCTCGCAGTCCCTTATATTGGATCTGGGCAGCAACAACAATCCGTGGCTCAAAGGTATAGTGAAATGGAAGCTCCATGGAGTCCTGCTTTCGTTTCACCCAGGCATCCTGGTCTGTATGATCCAAGACCAGTGGGAGAATATCCATCTTCTCCATCTGCGTGGTACCGTCTGCCATTCCCTGAGTTTCCAGATAAATACTTTGAAAGAATGCCTGAAGACTACACCAGGGAGCAAATGAATCACCAGTATATGTATGAACATCAACCACAATCTAATGAGAACATTGTCTGGCTGCCAAATGGACCTATTAGTGAAAAGTCAGGTTTCCCTGGTAATATATTACACGGACATGGTGTTCCTGATGGGAATAGTTCTTGTGAACACTGTCGATCAAATTATCATCGGTATCAAACACACATGGAGCAAGCTAATATGTTAAATGGACTTCCTCATGAATACTCTCAGAATAGGGAGGCATTGATGCAAAAGGCTGACACGAAGTTCCATCATGGTATTTTCCCAAATGAGCAGAATATTAATGATCCTCGATCTGCTTATAACGAGACACCACCCCATGAGAGAGGATGGATTGTGCAACACCAGATGAGCGTGCGGGGGGATGACACGAGAACATATGTTTCTGGGGCTGGACGATTGAATGATCACTACATTGTGGATGGTTCTGGCTCAAATTTTCCTCCTACACAAAGTAATATAACTGATGGCTACCAAGCTTCCATGAATTTTCATGATGAGGTATTTCGTGACCAGGTTGTGCCTAGTGGGCAACATATGTGTGTTCCTCCTCCTGAAGATCGTGGTGTTGGTTATATGAATATGCCTTATGGATATGGAGCAGATCCTCAATATCCTCCTGTGGCACACAGGCATATGCCTGGAAATGCTGCCTGGCGAAATGTTCAGAACCCGTCACATGTTGCTCCTCCTTATGAAGCATCTGTTTCCATTCAGCAAGGGAATGTGACTGTTAATCCAGGATATATCAGAGCCATGCAGGAGGGTAGCCCCCGCATTCATATTGGTACGGACCATCAAAATCCTTGGCATGAATCCTCACAGAAAATGTTGGGTATTGAGGGAGCAACTGGTTCAGAGCATTTACCTGCACTTGTTTTGAAGACCAATTCGACCATGGTTGGCCATGACAACCAACAATTCACAAATTTAGAACATATCCAACCACATCTAGATAAGATAAACCTCATCGCTTCTCCTTTGCAGAGATCAGATTCATCTTCAGCATTTATTCATGAAAAAATGGTTTCACCTTTTAATCCTAGCCAAAATCCACAACCGAGGACTGTTAGTGTGATTAATGAAGCTATGATGATGGAAAGGAAAATTGTGCCTGGGGAAGGAAACGAACACATGATAACTGATATGGGGGAAGCTGACATTTCTGAAGCAGGCCTTGTATCTCATCCAGAGCAGAATAACACTGATGATACATATTCCAAGGATGTACCCCCTGAATCGTTAAATTCAAATTGCACGAACACTCCAGTAGATAATGGTGATGACTTGAAATCTGATGTAGAGACTCTTGAAAATCCAAAACTATCTGTCAGCCGTCTGAGTTTCTTACCTGAGTTGATTGCATCTGTGAAAAGAGCAGCATTAGAAGTATCTGAAGAGGCAATGGTTGAAGAAACCGCTCTAAGGACACCTGATTCAATAGGAAAAAAAGAGACAGCTAATGAGCTAGGCTCCTTGAACGCCCATGGGGAACCTGAGTTGGAAACTGGGAGTGAGAATCAAAGCTCCACAATTGAGCCAACAAAGGCTGAAGAAGAAGCCATTTCAAGAGGATTACAAACGATTAACAATGATGATCTGGAGGAGATTCGTGAACTAGGGTCTGGGACTTATGGTGCTGTTTATCATGGGAAATGGAGAGGTTCTGATGTTGCAATAAAGAGGATAAAAGCTAGCTGTTTTGCTGGACGACCCTCAGAAAGGGAACGTCTGATTGCAGATTTTTGGAAGGAAGCTTTGATATTAAGTTCCTTACACCATCCAAATGTTGTTTCCTTCTATGGTATTGTTCGTGATGGTCCTGATGGTTCCTTAGCAACAGTGACAGAATTCATGGTAAATGGATCATTGAAACAGTTTTTGCACAAGAAGGACAGTGAGTCGTACTGGGATTGTGATCGTAAATACTACCTTTTCTATAGGACAATTGATCGTCGTAAGAGACTAATTATAGCCATGGATGCTGCATTTGGGATGGAATATTTGCATGGGAAGAATATTGTACATTTCGATTTGAAATGCGAAAACCTTTTAGTGAATATGAGAGATCCTCAGAGGCCTGTTTGCAAGATCGGTGATTTGGGATTGTCGAAGGTGAGACAACACACGTTAGTATCGGGAGGGGTTCGTGGAACTTTACCCTGGATGGCACCCGAGCTTCTTAGTGGGAAAAGCAACATGGTGACAGAGAAGATTGATGTTTACTCATTTGGGATTGTTATGTGGGAAGTACTCACGGGAGATGAACCGTATTCAGATATGCATTGTGCTTCTATAATCGGAGGAATCGTAAACAATTGTTTACGTCCAGAAATCCCGACATGGTGCGACCCGGAATGGAAGGCTTTAATGTCAAGCTGCTGGGACTCAGACCCAGCTATGAGACCATCATTTTCAGAAATTTCTCAGAAGCTAAGGAATATGGCAGCTGCAATGAATGTGAAATACATAATTTTTGAAACTTTACGGCCGCCTGCTGATGATTCTCAAAGTATAAGAAGGCTATTAGATGTGATATCATTCTCTTGTGGAATCCTTTTCGTGTTCTATACACTGCATTGCTGGGAGACTACAAGTACAGATATGAAGGAGATCCATGATAGGCAATGGGAATGTAAGCCTAAGCCTTCTCTTTTCCTCTTCTTTTCGACTTCGACTTCACCTGGGAGTTCGGCGTTGGAAGCATACGCCATACGGTACGATACGGTACATTTGCCATGA | 3633 | 43.13 | MDSPLTSISAPNSSPVSNPGSNDENPRVKFLCSFLGSIMPRPQDGKLRYVGGETRIVSAPRDITYEELMVKMRELYDGAAVLKYQQPDEDLDALVSVVNDDDVINMMEEYDKVGSGDGFTRLRIFLFSNPEQECSLPFVDGDERDTERRYVDALNNSNDVNDFVRQQQPDSPVISGIDDVHGIEHFLNPMNIEGSLHTQRSCEPLSQYQLHQLAVPYIGSGQQQQSVAQRYSEMEAPWSPAFVSPRHPGLYDPRPVGEYPSSPSAWYRLPFPEFPDKYFERMPEDYTREQMNHQYMYEHQPQSNENIVWLPNGPISEKSGFPGNILHGHGVPDGNSSCEHCRSNYHRYQTHMEQANMLNGLPHEYSQNREALMQKADTKFHHGIFPNEQNINDPRSAYNETPPHERGWIVQHQMSVRGDDTRTYVSGAGRLNDHYIVDGSGSNFPPTQSNITDGYQASMNFHDEVFRDQVVPSGQHMCVPPPEDRGVGYMNMPYGYGADPQYPPVAHRHMPGNAAWRNVQNPSHVAPPYEASVSIQQGNVTVNPGYIRAMQEGSPRIHIGTDHQNPWHESSQKMLGIEGATGSEHLPALVLKTNSTMVGHDNQQFTNLEHIQPHLDKINLIASPLQRSDSSSAFIHEKMVSPFNPSQNPQPRTVSVINEAMMMERKIVPGEGNEHMITDMGEADISEAGLVSHPEQNNTDDTYSKDVPPESLNSNCTNTPVDNGDDLKSDVETLENPKLSVSRLSFLPELIASVKRAALEVSEEAMVEETALRTPDSIGKKETANELGSLNAHGEPELETGSENQSSTIEPTKAEEEAISRGLQTINNDDLEEIRELGSGTYGAVYHGKWRGSDVAIKRIKASCFAGRPSERERLIADFWKEALILSSLHHPNVVSFYGIVRDGPDGSLATVTEFMVNGSLKQFLHKKDSESYWDCDRKYYLFYRTIDRRKRLIIAMDAAFGMEYLHGKNIVHFDLKCENLLVNMRDPQRPVCKIGDLGLSKVRQHTLVSGGVRGTLPWMAPELLSGKSNMVTEKIDVYSFGIVMWEVLTGDEPYSDMHCASIIGGIVNNCLRPEIPTWCDPEWKALMSSCWDSDPAMRPSFSEISQKLRNMAAAMNVKYIIFETLRPPADDSQSIRRLLDVISFSCGILFVFYTLHCWETTSTDMKEIHDRQWECKPKPSLFLFFSTSTSPGSSALEAYAIRYDTVHLP | 1210 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 3580815 | 3587102 | + | Cp4.1LG11g05880.1 | Cpe11g00598 | 477392 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe11g00598 | 1210 | MobiDBLite | consensus disorder prediction | 790 | 815 | - | - | |
Cpe11g00598 | 1210 | Gene3D | - | 46 | 129 | - | - | |
Cpe11g00598 | 1210 | SUPERFAMILY | Protein kinase-like (PK-like) | 818 | 1107 | IPR011009 | - | |
Cpe11g00598 | 1210 | PANTHER | SERINE-THREONINE PROTEIN KINASE | 18 | 1119 | - | - | |
Cpe11g00598 | 1210 | CDD | STKc_MAP3K-like | 837 | 1109 | - | - | |
Cpe11g00598 | 1210 | MobiDBLite | consensus disorder prediction | 798 | 813 | - | - | |
Cpe11g00598 | 1210 | SMART | PB1_new | 42 | 127 | IPR000270 | GO:0005515 | |
Cpe11g00598 | 1210 | ProSitePatterns | Protein kinases ATP-binding region signature. | 837 | 858 | IPR017441 | GO:0005524 | |
Cpe11g00598 | 1210 | SUPERFAMILY | CAD & PB1 domains | 44 | 133 | - | - | |
Cpe11g00598 | 1210 | Pfam | PB1 domain | 43 | 127 | IPR000270 | GO:0005515 | |
Cpe11g00598 | 1210 | CDD | PB1_UP2 | 31 | 127 | - | - | |
Cpe11g00598 | 1210 | Pfam | Protein tyrosine and serine/threonine kinase | 832 | 1109 | IPR001245 | GO:0004672|GO:0006468 | |
Cpe11g00598 | 1210 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - | |
Cpe11g00598 | 1210 | ProSiteProfiles | Protein kinase domain profile. | 831 | 1121 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe11g00598 | 1210 | SMART | serkin_6 | 831 | 1115 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe11g00598 | 1210 | MobiDBLite | consensus disorder prediction | 692 | 722 | - | - | |
Cpe11g00598 | 1210 | Gene3D | Phosphorylase Kinase; domain 1 | 817 | 917 | - | - | |
Cpe11g00598 | 1210 | PANTHER | KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN | 18 | 1119 | - | - | |
Cpe11g00598 | 1210 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 971 | 983 | IPR008271 | GO:0004672|GO:0006468 | |
Cpe11g00598 | 1210 | Gene3D | Transferase(Phosphotransferase) domain 1 | 939 | 1125 | - | - | |
Cpe11g00598 | 1210 | PRINTS | Tyrosine kinase catalytic domain signature | 965 | 983 | IPR001245 | GO:0004672|GO:0006468 | |
Cpe11g00598 | 1210 | PRINTS | Tyrosine kinase catalytic domain signature | 1080 | 1102 | IPR001245 | GO:0004672|GO:0006468 | |
Cpe11g00598 | 1210 | PRINTS | Tyrosine kinase catalytic domain signature | 913 | 926 | IPR001245 | GO:0004672|GO:0006468 | |
Cpe11g00598 | 1210 | PRINTS | Tyrosine kinase catalytic domain signature | 1036 | 1058 | IPR001245 | GO:0004672|GO:0006468 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe07g00841 | Cpe11g00598 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe11g00598 | Cpe-Chr11:3580815 | Cpe16g00711 | Cpe-Chr16:7264664 | 1.99E-136 | dispersed | |
Cpe14g00671 | Cpe-Chr14:4405118 | Cpe11g00598 | Cpe-Chr11:3580815 | 2.83E-29 | dispersed | |
Cpe11g00598 | Cpe-Chr11:3580815 | Cpe07g00841 | Cpe-Chr7:7623623 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
62712 | PF07714 | PK_Tyr_Ser-Thr | 6.20E-59 | CL0016 | Cpe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe11g00598 | - | - | cmax:111492314 | 2221.82 |