Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe11g00623 | ATGGTGGGTGAGGTGGCAATGGAGAAGAATATGAAAGTAACAAGAGAGAACAAATTTGAAAGAAGCCATTTTGATGTGTTGGGAATTTGCTGTTCTTCAGAAGTCCCTCTCATTGAAAACATCCTCAAACCCCTCGAAGGAATCAAACAAATCTCTGTTATTGTCCCAACAAGAACTCTCATTGTCGTACATGATTCCCTCCTTGTTTCTCAGCTTCAAATCGCGAAAGCACTAAATGAAGCAAGATTGGAGGCAAATGTACAATTAAAAGGAAAGGGAATTAGCAAGAAGAAATGGCCAAGTCCTTTTGCAATAGCCAGTGGGTTGCTTCTAACAGCATCCTTTTTGAAGTATGTCTACCACCCATTGCGGTGGCTGGCCGTCGCAGCGGTGGCCGCCGGCATCTTCCCCATTCTCCTAAAAGCCATTTCCGCCGTTCGCCATCTCAGGATCGATGTCAACATTCTTGCCATTATTGCTGTGGTGGGGACAATCAGTATGAATGATTACATGGAAGCTGGGAGCATAGTGTTTTTGTTTTCCATTGCTGAATGGCTTGAGTCAAGAGCAAGCCACAAGGCCAATGCTGCAATGTGGTCGCTGATGAGCCTGGCCCCTCAGAAGGCCACCATAGCTGAAACAGGAGAGGTTGTGGAGGTAAAAGAGGTGAAATTGAAGAGTGTGTTGGCAGTGAAGGGTGGTGAAGTTATTCCCATTGATGGCATTGTTGTGGATGGAAAATGTGATGTTGATGAGAAATCTTTGACTGGAGAGACTTTCCCAGTTCCCAAACTTAAAGGTTATATTAGTGTTCAAACCACTGTTGTTGCTGAGGACTGCGTGGTGGCAAAGATGGCTGAGTTTGTAGAAGAAGCTCAAAACAACAAATCAAAAACTCAGAGATTCATTGATGAATGTGCCAAATATTACACTCCAGCTGTAGTTGTCATATCAGCTTGTGTAGCAGCCATTCCAGCTGCACTGAGAGTTCACAATCTCACCCATTGGTTTCACTTAGCTCTGGTGGTCTTAGTGAGTGCCTGTCCCTGTGCCCTTATCCTCTCCACCCCGGTCGCCGNCAAAAACACAGCATGTTTTTTGTATGCAGCTGTAGTTGTCATATCAGCTTGTGTAGCAGCCATTCCAGCTGCACTGAGAGTTCACAATCTCACCCATTGGTTTCACTTAGCTCTGGTGGTCTTAGTGAGTGCCTGTCCCTGTGCCCTTATCCTCTCCACCCCGGTCGCCGCCTTCTGCGCCCTCACCAAGGCCGCCATGGCCGGTGTTCTCATCAAAGGCAGCGACCACCTTGAAGTTCTTGCAAAGATTAAGGTTGTAGCCTTCGACAAGACTGGCACAATCACTAGAGGTGAATTTGTGGTGACAAATTTTGAAGCTCTACGAGATGATATCAGCTTCCACACCTTACTTCATTGGGTTTCGAGCATTGAGAGCAAATCAAGCCATCCAATGGCAGCTGCCCTTGTCAACCATGCAAAGCTGCTTTCTATTGATATTAAACCTGAAAAAGTTGAGGAATTTGAGAACTTTCCTGGAGAAGGTGTTCGTGGGAAGATTGATGGGAAGGATATTTACATTGGAAGTACAAAAATTGCTGCCCGAGCTGGCTGCTCGTCAGGAGCTAAAGAAGGCATGGAGGAGCTCAAGAGTTTTGGCATTAAAACAGCTATGCTCACTGGGGACTGTAATGCAGCCGCCATGCACGCCCAACAACAGCTGGAGAACGCGGTTGATGTGATCCATTCAGAGCTTCTTCCAAAGGAGAAAGCAAATGTGATAAAAGAATTCAAAAGGGATTATGGAGCAACCGCCATGGTTGGCGATGGCTTAAATGATACCCCAGCATTAGCCACAGCTGATATTGGCATATCAATGGGCATTTCTGGTTCACCTCTCGCTACTCAAACTGGGAATGTCATCTTAATGTCAAATGACATCACAAAAATCCCACAAGCCATCAAATTAGCAAGGAAATCTCATGCAAAAGTTGTTCAAAATGTCATTTTGTCAATCACTACCAAGATTGCAATCCTTGGCTTGGCCATCGCCGGACATCCGCTCGTTTGGGCGGCCGTTCTCGCCGATGTC | 2109 | 46.04 | MVGEVAMEKNMKVTRENKFERSHFDVLGICCSSEVPLIENILKPLEGIKQISVIVPTRTLIVVHDSLLVSQLQIAKALNEARLEANVQLKGKGISKKKWPSPFAIASGLLLTASFLKYVYHPLRWLAVAAVAAGIFPILLKAISAVRHLRIDVNILAIIAVVGTISMNDYMEAGSIVFLFSIAEWLESRASHKANAAMWSLMSLAPQKATIAETGEVVEVKEVKLKSVLAVKGGEVIPIDGIVVDGKCDVDEKSLTGETFPVPKLKGYISVQTTVVAEDCVVAKMAEFVEEAQNNKSKTQRFIDECAKYYTPAVVVISACVAAIPAALRVHNLTHWFHLALVVLVSACPCALILSTPVAXKNTACFLYAAVVVISACVAAIPAALRVHNLTHWFHLALVVLVSACPCALILSTPVAAFCALTKAAMAGVLIKGSDHLEVLAKIKVVAFDKTGTITRGEFVVTNFEALRDDISFHTLLHWVSSIESKSSHPMAAALVNHAKLLSIDIKPEKVEEFENFPGEGVRGKIDGKDIYIGSTKIAARAGCSSGAKEGMEELKSFGIKTAMLTGDCNAAAMHAQQQLENAVDVIHSELLPKEKANVIKEFKRDYGATAMVGDGLNDTPALATADIGISMGISGSPLATQTGNVILMSNDITKIPQAIKLARKSHAKVVQNVILSITTKIAILGLAIAGHPLVWAAVLADV | 703 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 3953260 | 3957604 | + | Cp4.1LG11g06220.1 | Cpe11g00623 | 477417 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe11g00623 | 703 | ProSiteProfiles | Heavy-metal-associated domain profile. | 21 | 87 | IPR006121 | GO:0046872 | |
Cpe11g00623 | 703 | Gene3D | - | 458 | 544 | IPR023299 | GO:0000166 | |
Cpe11g00623 | 703 | PANTHER | CADMIUM/ZINC-TRANSPORTING ATPASE HMA4-RELATED | 9 | 360 | - | - | |
Cpe11g00623 | 703 | PANTHER | CADMIUM/ZINC-TRANSPORTING ATPASE HMA4-RELATED | 368 | 546 | - | - | |
Cpe11g00623 | 703 | PANTHER | CADMIUM/ZINC-TRANSPORTING ATPASE HMA4-RELATED | 544 | 703 | - | - | |
Cpe11g00623 | 703 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 367 | 685 | IPR023298 | - | |
Cpe11g00623 | 703 | Gene3D | - | 439 | 457 | IPR023214 | - | |
Cpe11g00623 | 703 | Gene3D | - | 547 | 664 | IPR023214 | - | |
Cpe11g00623 | 703 | SUPERFAMILY | Calcium ATPase, transduction domain A | 216 | 284 | IPR008250 | - | |
Cpe11g00623 | 703 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 367 | 689 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cpe11g00623 | 703 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 176 | 362 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cpe11g00623 | 703 | Gene3D | - | 16 | 89 | - | - | |
Cpe11g00623 | 703 | PANTHER | CADMIUM/ZINC-TRANSPORTING ATPASE HMA2-RELATED | 9 | 360 | - | - | |
Cpe11g00623 | 703 | PANTHER | CADMIUM/ZINC-TRANSPORTING ATPASE HMA2-RELATED | 368 | 546 | - | - | |
Cpe11g00623 | 703 | PANTHER | CADMIUM/ZINC-TRANSPORTING ATPASE HMA2-RELATED | 544 | 703 | - | - | |
Cpe11g00623 | 703 | SUPERFAMILY | HAD-like | 445 | 702 | IPR036412 | - | |
Cpe11g00623 | 703 | Pfam | haloacid dehalogenase-like hydrolase | 443 | 538 | - | - | |
Cpe11g00623 | 703 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 154 | 362 | IPR023298 | - | |
Cpe11g00623 | 703 | Pfam | E1-E2 ATPase | 204 | 360 | - | - | |
Cpe11g00623 | 703 | PRINTS | P-type cation-transporting ATPase superfamily signature | 637 | 649 | - | - | |
Cpe11g00623 | 703 | PRINTS | P-type cation-transporting ATPase superfamily signature | 447 | 461 | - | - | |
Cpe11g00623 | 703 | PRINTS | P-type cation-transporting ATPase superfamily signature | 558 | 568 | - | - | |
Cpe11g00623 | 703 | PRINTS | P-type cation-transporting ATPase superfamily signature | 251 | 265 | - | - | |
Cpe11g00623 | 703 | PRINTS | P-type cation-transporting ATPase superfamily signature | 613 | 632 | - | - | |
Cpe11g00623 | 703 | Gene3D | - | 168 | 381 | - | - | |
Cpe11g00623 | 703 | Pfam | haloacid dehalogenase-like hydrolase | 546 | 627 | - | - | |
Cpe11g00623 | 703 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 449 | 455 | IPR018303 | - | |
Cpe11g00623 | 703 | SUPERFAMILY | HMA, heavy metal-associated domain | 16 | 86 | IPR036163 | GO:0046872 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe11g00623 | Cpe-Chr11:3953260 | Cpe19g01198 | Cpe-Chr19:8043954 | 8.34E-60 | dispersed | |
Cpe11g00623 | Cpe-Chr11:3953260 | Cpe11g00625 | Cpe-Chr11:3984038 | 1.09E-18 | proximal | |
Cpe11g00623 | Cpe-Chr11:3953260 | Cpe18g00631 | Cpe-Chr18:6534383 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe11g00623 | K01534 | - | jre:109019139 | 850.892 |