Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe11g00625 ATGACTTGTGTAGCAGCCATTCCAGCTGCACTGAGAGTTCACAATCTCACCCATTGGTTTCACTTAGCTCTGGTGGTCTTAGTGAGTGCCTGTCCCTGTGCCCTTATCCTCTCCACCCCGGTCGCCGCCTTCTGCGCCCTCACCAAGGCCGCCATGGCCGGTGTTCTCATCAAAGGCAGCGACCACCTTGAAGTTCTTGCAAAGATTAAGGTTGTAGCCTTCGACAAGACTGGCACAATCACTAGAGGTGAATTTGTGGTGACAAATTTTCAAGCTCTACGAGATGATATCAGCTTCCACACCTTACTTCATTGGGTTTCGAGCATTGAGAGCAAATCAAGCCATCCAATGGCAGCTGCCCTTGTCAACCATGCAAAGCTGCTTTCTATTGATATTAAACCTGAAAAAGTTGAGGAATTTGAGAACTTTCCTGGAGAAGGTGTTCGTGGGAAGATTGATGGGAAGGATATTTACATTGGAACTACAAAAATTGCTGCCCGAGCTGGCTGCTCGTCAGGAGCTAAAGAAGGCATGGAGGAGCTCAAGAGTTTTGGCATTAAAACAGCTATGCTCACTGGGGACTGTAATGCAGCCGCCATGCACGCCCAACAACAGCTGGAGAACGCGGTTGATGTGATCCATTCAGAGCTTCTTCCAAAGGAGAAAGCAAATGTGATAAAAGAATTCAAAAGGGATTATGGAGCAACCGCCATGGTTGGCGATGGCTTAAATGATACCCCAGCATTAGCCACAGCTGATATTGGCATATCAATGGGCATTTCTGGTTCACCTCTCGCTACTCAAACTGGGAATGTCATCTTAATGTCAAATGACATCACAAAAATCCCACAAGCCATCAAATTAGCAAGGAAATCTCATGCAAAAGTTGTTCAAAATGTCATTTTGTCAATCACTACCAAGATTGCAATCCTTGGCTTGGCCATCGCCGGACATCCGCTCGTTTGGGCGGCCGTTCTCGCCGATGTCGGTACCTGCCTATTGAGTCATTCAATTATCAATAAGGATGAAATTGACCAAACACTTTATGCTAGTGACATGGTACAAAAATGA 1071 46.22 MTCVAAIPAALRVHNLTHWFHLALVVLVSACPCALILSTPVAAFCALTKAAMAGVLIKGSDHLEVLAKIKVVAFDKTGTITRGEFVVTNFQALRDDISFHTLLHWVSSIESKSSHPMAAALVNHAKLLSIDIKPEKVEEFENFPGEGVRGKIDGKDIYIGTTKIAARAGCSSGAKEGMEELKSFGIKTAMLTGDCNAAAMHAQQQLENAVDVIHSELLPKEKANVIKEFKRDYGATAMVGDGLNDTPALATADIGISMGISGSPLATQTGNVILMSNDITKIPQAIKLARKSHAKVVQNVILSITTKIAILGLAIAGHPLVWAAVLADVGTCLLSHSIINKDEIDQTLYASDMVQK 356
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 3984038 3989170 - Cp4.1LG11g06250.1 Cpe11g00625 477419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe11g00625 356 Gene3D - 7 69 - -
Cpe11g00625 356 Gene3D - 85 139 IPR023299 GO:0000166
Cpe11g00625 356 Pfam haloacid dehalogenase-like hydrolase 69 161 - -
Cpe11g00625 356 SUPERFAMILY HAD-like 71 333 IPR036412 -
Cpe11g00625 356 PANTHER HEAVY METAL ATPASE TRANSPORTER 170 335 - -
Cpe11g00625 356 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA2-RELATED 170 335 - -
Cpe11g00625 356 ProSitePatterns E1-E2 ATPases phosphorylation site. 75 81 IPR018303 -
Cpe11g00625 356 Gene3D - 70 84 IPR023214 -
Cpe11g00625 356 PRINTS P-type cation-transporting ATPase superfamily signature 184 194 - -
Cpe11g00625 356 PRINTS P-type cation-transporting ATPase superfamily signature 263 275 - -
Cpe11g00625 356 PRINTS P-type cation-transporting ATPase superfamily signature 73 87 - -
Cpe11g00625 356 PRINTS P-type cation-transporting ATPase superfamily signature 239 258 - -
Cpe11g00625 356 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA2-RELATED 2 171 - -
Cpe11g00625 356 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 5 316 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cpe11g00625 356 PANTHER HEAVY METAL ATPASE TRANSPORTER 2 171 - -
Cpe11g00625 356 PRINTS H+-transporting ATPase (proton pump) signature 239 255 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cpe11g00625 356 PRINTS H+-transporting ATPase (proton pump) signature 271 296 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cpe11g00625 356 Gene3D - 153 307 IPR023214 -
Cpe11g00625 356 SUPERFAMILY Calcium ATPase, transmembrane domain M 15 314 IPR023298 -
Cpe11g00625 356 Pfam haloacid dehalogenase-like hydrolase 173 253 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe11g00625 Cpe-Chr11:3984038 Cpe18g00631 Cpe-Chr18:6534383 1.38E-143 dispersed
Cpe11g00623 Cpe-Chr11:3953260 Cpe11g00625 Cpe-Chr11:3984038 1.09E-18 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe11g00625 K01534 - csv:101203668 539.265