Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe11g00625 | ATGACTTGTGTAGCAGCCATTCCAGCTGCACTGAGAGTTCACAATCTCACCCATTGGTTTCACTTAGCTCTGGTGGTCTTAGTGAGTGCCTGTCCCTGTGCCCTTATCCTCTCCACCCCGGTCGCCGCCTTCTGCGCCCTCACCAAGGCCGCCATGGCCGGTGTTCTCATCAAAGGCAGCGACCACCTTGAAGTTCTTGCAAAGATTAAGGTTGTAGCCTTCGACAAGACTGGCACAATCACTAGAGGTGAATTTGTGGTGACAAATTTTCAAGCTCTACGAGATGATATCAGCTTCCACACCTTACTTCATTGGGTTTCGAGCATTGAGAGCAAATCAAGCCATCCAATGGCAGCTGCCCTTGTCAACCATGCAAAGCTGCTTTCTATTGATATTAAACCTGAAAAAGTTGAGGAATTTGAGAACTTTCCTGGAGAAGGTGTTCGTGGGAAGATTGATGGGAAGGATATTTACATTGGAACTACAAAAATTGCTGCCCGAGCTGGCTGCTCGTCAGGAGCTAAAGAAGGCATGGAGGAGCTCAAGAGTTTTGGCATTAAAACAGCTATGCTCACTGGGGACTGTAATGCAGCCGCCATGCACGCCCAACAACAGCTGGAGAACGCGGTTGATGTGATCCATTCAGAGCTTCTTCCAAAGGAGAAAGCAAATGTGATAAAAGAATTCAAAAGGGATTATGGAGCAACCGCCATGGTTGGCGATGGCTTAAATGATACCCCAGCATTAGCCACAGCTGATATTGGCATATCAATGGGCATTTCTGGTTCACCTCTCGCTACTCAAACTGGGAATGTCATCTTAATGTCAAATGACATCACAAAAATCCCACAAGCCATCAAATTAGCAAGGAAATCTCATGCAAAAGTTGTTCAAAATGTCATTTTGTCAATCACTACCAAGATTGCAATCCTTGGCTTGGCCATCGCCGGACATCCGCTCGTTTGGGCGGCCGTTCTCGCCGATGTCGGTACCTGCCTATTGAGTCATTCAATTATCAATAAGGATGAAATTGACCAAACACTTTATGCTAGTGACATGGTACAAAAATGA | 1071 | 46.22 | MTCVAAIPAALRVHNLTHWFHLALVVLVSACPCALILSTPVAAFCALTKAAMAGVLIKGSDHLEVLAKIKVVAFDKTGTITRGEFVVTNFQALRDDISFHTLLHWVSSIESKSSHPMAAALVNHAKLLSIDIKPEKVEEFENFPGEGVRGKIDGKDIYIGTTKIAARAGCSSGAKEGMEELKSFGIKTAMLTGDCNAAAMHAQQQLENAVDVIHSELLPKEKANVIKEFKRDYGATAMVGDGLNDTPALATADIGISMGISGSPLATQTGNVILMSNDITKIPQAIKLARKSHAKVVQNVILSITTKIAILGLAIAGHPLVWAAVLADVGTCLLSHSIINKDEIDQTLYASDMVQK | 356 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 3984038 | 3989170 | - | Cp4.1LG11g06250.1 | Cpe11g00625 | 477419 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe11g00625 | 356 | Gene3D | - | 7 | 69 | - | - | |
Cpe11g00625 | 356 | Gene3D | - | 85 | 139 | IPR023299 | GO:0000166 | |
Cpe11g00625 | 356 | Pfam | haloacid dehalogenase-like hydrolase | 69 | 161 | - | - | |
Cpe11g00625 | 356 | SUPERFAMILY | HAD-like | 71 | 333 | IPR036412 | - | |
Cpe11g00625 | 356 | PANTHER | HEAVY METAL ATPASE TRANSPORTER | 170 | 335 | - | - | |
Cpe11g00625 | 356 | PANTHER | CADMIUM/ZINC-TRANSPORTING ATPASE HMA2-RELATED | 170 | 335 | - | - | |
Cpe11g00625 | 356 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 75 | 81 | IPR018303 | - | |
Cpe11g00625 | 356 | Gene3D | - | 70 | 84 | IPR023214 | - | |
Cpe11g00625 | 356 | PRINTS | P-type cation-transporting ATPase superfamily signature | 184 | 194 | - | - | |
Cpe11g00625 | 356 | PRINTS | P-type cation-transporting ATPase superfamily signature | 263 | 275 | - | - | |
Cpe11g00625 | 356 | PRINTS | P-type cation-transporting ATPase superfamily signature | 73 | 87 | - | - | |
Cpe11g00625 | 356 | PRINTS | P-type cation-transporting ATPase superfamily signature | 239 | 258 | - | - | |
Cpe11g00625 | 356 | PANTHER | CADMIUM/ZINC-TRANSPORTING ATPASE HMA2-RELATED | 2 | 171 | - | - | |
Cpe11g00625 | 356 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 5 | 316 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cpe11g00625 | 356 | PANTHER | HEAVY METAL ATPASE TRANSPORTER | 2 | 171 | - | - | |
Cpe11g00625 | 356 | PRINTS | H+-transporting ATPase (proton pump) signature | 239 | 255 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cpe11g00625 | 356 | PRINTS | H+-transporting ATPase (proton pump) signature | 271 | 296 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cpe11g00625 | 356 | Gene3D | - | 153 | 307 | IPR023214 | - | |
Cpe11g00625 | 356 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 15 | 314 | IPR023298 | - | |
Cpe11g00625 | 356 | Pfam | haloacid dehalogenase-like hydrolase | 173 | 253 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe11g00625 | Cpe-Chr11:3984038 | Cpe18g00631 | Cpe-Chr18:6534383 | 1.38E-143 | dispersed | |
Cpe11g00623 | Cpe-Chr11:3953260 | Cpe11g00625 | Cpe-Chr11:3984038 | 1.09E-18 | proximal |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe11g00625 | K01534 | - | csv:101203668 | 539.265 |