Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe11g00633 ATGGCGGCTTTAACTCTCGAGGAGATCAAGAACGAGACAGTTGATCTGGAGAAAATTCCTATTGAAGAAGTGTTTGAGCAGCTGAAATGTACAAGAGAAGGTTTAACTTCCCAAGAAGGGGAGAATCGTCTTCAAATCTTTGGACCCAACAAGCTAGAAGAGAAAAAGGAAAGCAAGATTCTGAAGTTTCTTGGGTTTATGTGGAATCCCCTGTCTTGGGTCATGGAAGCTGCAGCTGTCATGGCCATTGCCTTGGCCAACGGCGGCGGTAGGGGCCCCGATTGGCAGGACTTCGTCGGTATCGTCTGTTTGTTGGTTATCAACTCCACCATTAGTTTCATTGAAGAGAACAATGCTGGTAATGCTGCAGCTGCTCTCATGGCTGGTCTTGCTCCTAAAACTAAGGTTCTAAGGGATGGAAAATGGTGTGAACAAGATGCATCAATTCTGGTTCCAGGAGACGTGATTAGTGTGAAACTAGGAGACATCATCCCGGCTGATGCTCGTCTTCTCGAGGGTGATCCGTTAAAGGTTGATCAGTCTGCGTTGACCGGAGAATCACTTCCCGTGACGAAGAATCCAGGGGATGAAGTTTTCTCTGGCTCAACTTGCAAACAAGGAGAAATTGAAGCTGTTGTTATTGCCACTGGTGTCCACACCTTCTTTGGAAAGGCAGCTCATCTTGTTGATAGCACCAACCAAGTTGGACACTTCCAAAAGGTTCTTACTGCCATTGGGAACTTCTGTATTTGCTCCATTGCCATTGGTATGCTGATCGAGATCATCGTCATGTACCCGATCCAACGCCGTGCCTACCGAGATGGAATCGACAATCTTTTGGTTCTTTTGATTGGAGGCATTCCAATTGCTATGCCTACTGTCTTGTCTGTCACTATGGCTATTGGGTCTCACAAGCTGTCCCAACAGGGTGCTATCACTAAGAGAATGACTGCTATCGAAGAAATGGCCGATTTATGCAGTTTCGATCACTATTCGTATTGTGGTACGTGTGCAGTCCTTGCTTAA 1026 46.3 MAALTLEEIKNETVDLEKIPIEEVFEQLKCTREGLTSQEGENRLQIFGPNKLEEKKESKILKFLGFMWNPLSWVMEAAAVMAIALANGGGRGPDWQDFVGIVCLLVINSTISFIEENNAGNAAAALMAGLAPKTKVLRDGKWCEQDASILVPGDVISVKLGDIIPADARLLEGDPLKVDQSALTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAIGMLIEIIVMYPIQRRAYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHKLSQQGAITKRMTAIEEMADLCSFDHYSYCGTCAVLA 341
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 4054155 4058118 - Cp4.1LG11g06440.1 Cpe11g00633 477427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe11g00633 341 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 101 324 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cpe11g00633 341 PANTHER CALCIUM-TRANSPORTING ATPASE 1 325 - -
Cpe11g00633 341 Gene3D - 132 216 - -
Cpe11g00633 341 PANTHER PLASMA MEMBRANE ATPASE 1 325 - -
Cpe11g00633 341 SMART Cation_ATPase_N_a_2 15 87 IPR004014 -
Cpe11g00633 341 SUPERFAMILY Calcium ATPase, transmembrane domain M 15 323 IPR023298 -
Cpe11g00633 341 Gene3D - 94 324 - -
Cpe11g00633 341 SUPERFAMILY Calcium ATPase, transduction domain A 132 229 IPR008250 -
Cpe11g00633 341 Pfam E1-E2 ATPase 131 308 - -
Cpe11g00633 341 Pfam Cation transporter/ATPase, N-terminus 18 81 IPR004014 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe07g00251 Cpe-Chr7:1633612 Cpe11g00633 Cpe-Chr11:4054155 0 dispersed
Cpe11g00633 Cpe-Chr11:4054155 Cpe18g00548 Cpe-Chr18:6048594 8.86E-175 dispersed
Cpe11g00633 Cpe-Chr11:4054155 Cpe04g01319 Cpe-Chr4:10842080 1.52E-146 wgd
Cpe11g00633 Cpe-Chr11:4054155 Cpe07g00741 Cpe-Chr7:6414722 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe11g00633 K01535 - csv:101221564 597.816