Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe11g00638 | ATGCAAGAGAAGAGAGAACTTGTTTATGAAATTTCGAGGTCACACGGTGCGTGTGAGAAACTGCAGTCATGGAGTCGTCAAGACATTCTACAAGTCCTGTGTGCAGAGATGGGGAAAGAAAGGAAATATACAGGCTTGACGAAGCAGAAAATAATAGAGCATCTTTTGAGACTCGTATCCGAAAACAAGTCATCGGTGCCTGAGGTTTCGAAAAACGTTGAGCCACAGTCTCCTGCAAGTGGCCATAAAACTACCAAAAGGCAGAGGAAATCCGATCATCTAGTTCCTACAAGTGACTTTCCGAGCACTAGTTCTCATAATGATTCGGGTCATACGGTGAGCTGCAAGAACTTGGCTTGTCGAGCAACTCTAAATCCAGAAGATACGTTTTGTAGAAGGTGTTCTTGCTGCATCTGTCGTCAGTATGACGATAACAAGGATCCTAGCTTGTGGATAAGTTGCAGTGCGGAGCCTCCGTTTCAAGGTGACTCGTGCAACATGTCGTGTCATCTCGAATGTGCTTTAAAAGATGAAAGATCGGGCATTTTGAAAGCCGGACAAAGCAGGGGAATTGATGGGAGCTTCTACTGTGTGTCTTGTGGGAAACTAAACGATTTGCTTGGGTGCTGCAGAAAGCAACTAGTTCATGCAAAAGAAACACGAAGGGTCGACATACTGTGTTATCGTGTCTCTTTGAGCCAAAAGCTTCTCCATGGAACTGAAAAGTATAAAGTGCTTTATCAGATTGTTGATGAATCAGTGAAGAAGCTTGAAGCTGAAGTGGGACCAATAGCTGGTGCACCAGTAAAGATGGGTCGAGGTATCGTAAACAGGCTTTTATCGGGACCCGACGTTCAAAAACTCTGTGCTTCTGCTATTGAGATACTCGACTCGATGCTCTCCAGCAAATCCTTACATATTGTGCCTAATCCTGACATTCAAGATGCAAGTTTTGTTCCGACAAACATGGTTCGTTTCGAAGATGTTCGGTCGACATCCCTCACTCTGGTTTTGAGTTGTGAATATGGATCATCCTCTGAGAACCGGGTTGGATTCACGTTATGGCACCGTAAGGCGGATGATGCAGATTATCCAACAGAACCAACATATATTCTACAACAACCGAAGGCGAGGTGTGTCGTGATGGGACTATCACCTGCTACTGAATATCATTTCAAAATTGTTTTGTTTGAAGGGACAAGGGAGTTGAGGGAGTTTGAAGTTCAATTCTCAACAATTAGGGAGGTAGAAGAGAACCCAGGTTGTTTAGAAATTGAGAGAAGCCAAAGCCATGCAACCAACTGTAGCGACCTTTCGAATCCTTCTTCGGTTGAAGACGAAACTACCGACATTCTTCCCTATAGTGATCGAACCGATAACGTAGGAAAGAACTCGACCGCCCATTCAAAGGGCATGGAAATGCATTCCTCTGCTATTTTATCCACTGATGCTTTTAACCTCAGTGACAATGGTGAAGAAGGAACAGCAGCAGGAACAGTACCTGTGCTGGATGAGGCAAATGCTGCTGGTATTGTATGTTTGATTCCCAACTCTGTCGGATCAAAGCTCGAGAACAGGCATGGACCATCTGCGCCGAAACTCAACGCCAATAATCAATTAGGCGCTCTTGTTCGGTCTGGAATGGAGCGCCAGCCGTTCGTTGGCTGTTCTGAAGATGGCTTGCCTATTACACCCTGCAAGCTTGAAGTGCTAAAGGACAGTCTTGGTAGGGGTGAGAGACTGGAATCCAACTGCAAGGACATTGACAACAGGACTCGAAAAGGTGGGGAACCTCAAGATGGTGGCACGTCGAAGATGCGAACTGGGGAAAGACAGGACGATAAATGTACTGAAAATGGTCTTTCGGATCGGGATTTTGAACACTATGTGAAGGTTATTAGATGGTTAGAGTGCGAAGGACATATCGAAAAAAATTTCAGACAGAAGTTTCTTACTTGGTACAGCTTGAGAGCATCCCAACAAGAAGTGAAGATTGTGAAAGTGTTTGTGGATACCTTCATTGAAGATCCAGCATCTCTTGCAGAACAACTTGTAGATACTTTCTCGGAATGCATATCGAGCAAAAAACCGACGACGACACCGCCTGGGTTCTGCATGAAGCTGTGGCAC | 2130 | 45.02 | MQEKRELVYEISRSHGACEKLQSWSRQDILQVLCAEMGKERKYTGLTKQKIIEHLLRLVSENKSSVPEVSKNVEPQSPASGHKTTKRQRKSDHLVPTSDFPSTSSHNDSGHTVSCKNLACRATLNPEDTFCRRCSCCICRQYDDNKDPSLWISCSAEPPFQGDSCNMSCHLECALKDERSGILKAGQSRGIDGSFYCVSCGKLNDLLGCCRKQLVHAKETRRVDILCYRVSLSQKLLHGTEKYKVLYQIVDESVKKLEAEVGPIAGAPVKMGRGIVNRLLSGPDVQKLCASAIEILDSMLSSKSLHIVPNPDIQDASFVPTNMVRFEDVRSTSLTLVLSCEYGSSSENRVGFTLWHRKADDADYPTEPTYILQQPKARCVVMGLSPATEYHFKIVLFEGTRELREFEVQFSTIREVEENPGCLEIERSQSHATNCSDLSNPSSVEDETTDILPYSDRTDNVGKNSTAHSKGMEMHSSAILSTDAFNLSDNGEEGTAAGTVPVLDEANAAGIVCLIPNSVGSKLENRHGPSAPKLNANNQLGALVRSGMERQPFVGCSEDGLPITPCKLEVLKDSLGRGERLESNCKDIDNRTRKGGEPQDGGTSKMRTGERQDDKCTENGLSDRDFEHYVKVIRWLECEGHIEKNFRQKFLTWYSLRASQQEVKIVKVFVDTFIEDPASLAEQLVDTFSECISSKKPTTTPPGFCMKLWH | 710 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 4123384 | 4125702 | - | Cp4.1LG11g06360.1 | Cpe11g00638 | 477432 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe11g00638 | 710 | MobiDBLite | consensus disorder prediction | 433 | 473 | - | - | |
Cpe11g00638 | 710 | PANTHER | VIN3-LIKE PROTEIN 2-RELATED | 1 | 710 | IPR044514 | GO:0010048|GO:0040029 | |
Cpe11g00638 | 710 | MobiDBLite | consensus disorder prediction | 64 | 112 | - | - | |
Cpe11g00638 | 710 | CDD | FN3 | 320 | 395 | IPR003961 | GO:0005515 | |
Cpe11g00638 | 710 | PANTHER | VIN3-LIKE PROTEIN 2-RELATED | 1 | 710 | - | - | |
Cpe11g00638 | 710 | MobiDBLite | consensus disorder prediction | 584 | 616 | - | - | |
Cpe11g00638 | 710 | MobiDBLite | consensus disorder prediction | 95 | 112 | - | - | |
Cpe11g00638 | 710 | ProSiteProfiles | Fibronectin type-III domain profile. | 319 | 419 | IPR003961 | GO:0005515 | |
Cpe11g00638 | 710 | SUPERFAMILY | Fibronectin type III | 324 | 396 | IPR036116 | GO:0005515 | |
Cpe11g00638 | 710 | MobiDBLite | consensus disorder prediction | 64 | 82 | - | - | |
Cpe11g00638 | 710 | Pfam | PHD - plant homeodomain finger protein | 115 | 234 | IPR032881 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe11g00638 | Cpe18g00625 | CCT | |
Cpe04g01308 | Cpe11g00638 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe07g00175 | Cpe-Chr7:1046417 | Cpe11g00638 | Cpe-Chr11:4123384 | 1.49E-16 | dispersed | |
Cpe11g00473 | Cpe-Chr11:2718213 | Cpe11g00638 | Cpe-Chr11:4123384 | 6.47E-18 | dispersed | |
Cpe11g00638 | Cpe-Chr11:4123384 | Cpe11g01102 | Cpe-Chr11:9182784 | 3.38E-22 | dispersed | |
Cpe11g00638 | Cpe-Chr11:4123384 | Cpe18g00625 | Cpe-Chr18:6481914 | 0 | wgd | |
Cpe11g00638 | Cpe-Chr11:4123384 | Cpe04g01308 | Cpe-Chr4:10755776 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe11g00638 | - | - | csv:101222501 | 1252.65 |