Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe11g00638 ATGCAAGAGAAGAGAGAACTTGTTTATGAAATTTCGAGGTCACACGGTGCGTGTGAGAAACTGCAGTCATGGAGTCGTCAAGACATTCTACAAGTCCTGTGTGCAGAGATGGGGAAAGAAAGGAAATATACAGGCTTGACGAAGCAGAAAATAATAGAGCATCTTTTGAGACTCGTATCCGAAAACAAGTCATCGGTGCCTGAGGTTTCGAAAAACGTTGAGCCACAGTCTCCTGCAAGTGGCCATAAAACTACCAAAAGGCAGAGGAAATCCGATCATCTAGTTCCTACAAGTGACTTTCCGAGCACTAGTTCTCATAATGATTCGGGTCATACGGTGAGCTGCAAGAACTTGGCTTGTCGAGCAACTCTAAATCCAGAAGATACGTTTTGTAGAAGGTGTTCTTGCTGCATCTGTCGTCAGTATGACGATAACAAGGATCCTAGCTTGTGGATAAGTTGCAGTGCGGAGCCTCCGTTTCAAGGTGACTCGTGCAACATGTCGTGTCATCTCGAATGTGCTTTAAAAGATGAAAGATCGGGCATTTTGAAAGCCGGACAAAGCAGGGGAATTGATGGGAGCTTCTACTGTGTGTCTTGTGGGAAACTAAACGATTTGCTTGGGTGCTGCAGAAAGCAACTAGTTCATGCAAAAGAAACACGAAGGGTCGACATACTGTGTTATCGTGTCTCTTTGAGCCAAAAGCTTCTCCATGGAACTGAAAAGTATAAAGTGCTTTATCAGATTGTTGATGAATCAGTGAAGAAGCTTGAAGCTGAAGTGGGACCAATAGCTGGTGCACCAGTAAAGATGGGTCGAGGTATCGTAAACAGGCTTTTATCGGGACCCGACGTTCAAAAACTCTGTGCTTCTGCTATTGAGATACTCGACTCGATGCTCTCCAGCAAATCCTTACATATTGTGCCTAATCCTGACATTCAAGATGCAAGTTTTGTTCCGACAAACATGGTTCGTTTCGAAGATGTTCGGTCGACATCCCTCACTCTGGTTTTGAGTTGTGAATATGGATCATCCTCTGAGAACCGGGTTGGATTCACGTTATGGCACCGTAAGGCGGATGATGCAGATTATCCAACAGAACCAACATATATTCTACAACAACCGAAGGCGAGGTGTGTCGTGATGGGACTATCACCTGCTACTGAATATCATTTCAAAATTGTTTTGTTTGAAGGGACAAGGGAGTTGAGGGAGTTTGAAGTTCAATTCTCAACAATTAGGGAGGTAGAAGAGAACCCAGGTTGTTTAGAAATTGAGAGAAGCCAAAGCCATGCAACCAACTGTAGCGACCTTTCGAATCCTTCTTCGGTTGAAGACGAAACTACCGACATTCTTCCCTATAGTGATCGAACCGATAACGTAGGAAAGAACTCGACCGCCCATTCAAAGGGCATGGAAATGCATTCCTCTGCTATTTTATCCACTGATGCTTTTAACCTCAGTGACAATGGTGAAGAAGGAACAGCAGCAGGAACAGTACCTGTGCTGGATGAGGCAAATGCTGCTGGTATTGTATGTTTGATTCCCAACTCTGTCGGATCAAAGCTCGAGAACAGGCATGGACCATCTGCGCCGAAACTCAACGCCAATAATCAATTAGGCGCTCTTGTTCGGTCTGGAATGGAGCGCCAGCCGTTCGTTGGCTGTTCTGAAGATGGCTTGCCTATTACACCCTGCAAGCTTGAAGTGCTAAAGGACAGTCTTGGTAGGGGTGAGAGACTGGAATCCAACTGCAAGGACATTGACAACAGGACTCGAAAAGGTGGGGAACCTCAAGATGGTGGCACGTCGAAGATGCGAACTGGGGAAAGACAGGACGATAAATGTACTGAAAATGGTCTTTCGGATCGGGATTTTGAACACTATGTGAAGGTTATTAGATGGTTAGAGTGCGAAGGACATATCGAAAAAAATTTCAGACAGAAGTTTCTTACTTGGTACAGCTTGAGAGCATCCCAACAAGAAGTGAAGATTGTGAAAGTGTTTGTGGATACCTTCATTGAAGATCCAGCATCTCTTGCAGAACAACTTGTAGATACTTTCTCGGAATGCATATCGAGCAAAAAACCGACGACGACACCGCCTGGGTTCTGCATGAAGCTGTGGCAC 2130 45.02 MQEKRELVYEISRSHGACEKLQSWSRQDILQVLCAEMGKERKYTGLTKQKIIEHLLRLVSENKSSVPEVSKNVEPQSPASGHKTTKRQRKSDHLVPTSDFPSTSSHNDSGHTVSCKNLACRATLNPEDTFCRRCSCCICRQYDDNKDPSLWISCSAEPPFQGDSCNMSCHLECALKDERSGILKAGQSRGIDGSFYCVSCGKLNDLLGCCRKQLVHAKETRRVDILCYRVSLSQKLLHGTEKYKVLYQIVDESVKKLEAEVGPIAGAPVKMGRGIVNRLLSGPDVQKLCASAIEILDSMLSSKSLHIVPNPDIQDASFVPTNMVRFEDVRSTSLTLVLSCEYGSSSENRVGFTLWHRKADDADYPTEPTYILQQPKARCVVMGLSPATEYHFKIVLFEGTRELREFEVQFSTIREVEENPGCLEIERSQSHATNCSDLSNPSSVEDETTDILPYSDRTDNVGKNSTAHSKGMEMHSSAILSTDAFNLSDNGEEGTAAGTVPVLDEANAAGIVCLIPNSVGSKLENRHGPSAPKLNANNQLGALVRSGMERQPFVGCSEDGLPITPCKLEVLKDSLGRGERLESNCKDIDNRTRKGGEPQDGGTSKMRTGERQDDKCTENGLSDRDFEHYVKVIRWLECEGHIEKNFRQKFLTWYSLRASQQEVKIVKVFVDTFIEDPASLAEQLVDTFSECISSKKPTTTPPGFCMKLWH 710
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 4123384 4125702 - Cp4.1LG11g06360.1 Cpe11g00638 477432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe11g00638 710 MobiDBLite consensus disorder prediction 433 473 - -
Cpe11g00638 710 PANTHER VIN3-LIKE PROTEIN 2-RELATED 1 710 IPR044514 GO:0010048|GO:0040029
Cpe11g00638 710 MobiDBLite consensus disorder prediction 64 112 - -
Cpe11g00638 710 CDD FN3 320 395 IPR003961 GO:0005515
Cpe11g00638 710 PANTHER VIN3-LIKE PROTEIN 2-RELATED 1 710 - -
Cpe11g00638 710 MobiDBLite consensus disorder prediction 584 616 - -
Cpe11g00638 710 MobiDBLite consensus disorder prediction 95 112 - -
Cpe11g00638 710 ProSiteProfiles Fibronectin type-III domain profile. 319 419 IPR003961 GO:0005515
Cpe11g00638 710 SUPERFAMILY Fibronectin type III 324 396 IPR036116 GO:0005515
Cpe11g00638 710 MobiDBLite consensus disorder prediction 64 82 - -
Cpe11g00638 710 Pfam PHD - plant homeodomain finger protein 115 234 IPR032881 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe11g00638 Cpe18g00625 CCT
Cpe04g01308 Cpe11g00638 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe07g00175 Cpe-Chr7:1046417 Cpe11g00638 Cpe-Chr11:4123384 1.49E-16 dispersed
Cpe11g00473 Cpe-Chr11:2718213 Cpe11g00638 Cpe-Chr11:4123384 6.47E-18 dispersed
Cpe11g00638 Cpe-Chr11:4123384 Cpe11g01102 Cpe-Chr11:9182784 3.38E-22 dispersed
Cpe11g00638 Cpe-Chr11:4123384 Cpe18g00625 Cpe-Chr18:6481914 0 wgd
Cpe11g00638 Cpe-Chr11:4123384 Cpe04g01308 Cpe-Chr4:10755776 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe11g00638 - - csv:101222501 1252.65