Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe11g00660 ATGGTGCCTGGAAAAATGTTGGAGGGTGGTCAAAAATTCCCTGGAATGATCGATTTAAACGAGCATGCATATGATCTATCACAAGGGTTTTACCATAAACTTGGTGAGGGAACCAATATGTCTATTGACAGCTTTGCAAGCTTGCAAACGAGCAATGATGGAGGCTCAGTTGCCATGTCTTTAGATAACAGCAGTGTTGGATCGAATGAGTCTCATACTCGGATCTTAAATCACCAAGGGTTGCGGCGGCGTGCAAATGATAACCATACTTTTCAACATAGTGTTAACCATCGTGGAAGAGTTAGACATCACCTGAGTGATGATGCACTAGCCCGAGCTTTATTTGATAGTAATACACCCACCCAGGGTCTTGAAAATTTTGAGAAGTGGACTCTTGATTTAAGGAAACTTAATATGGGGGAGGCTTTTGCTCAAGGTGCCTTTGGAAAACTCTACAGAGGTACTTATGATGGCGAAGATGTCGCTATCAAGATCTTGGAGAGGCCAGAGAATGACGTAGAGAAGGCTCAGTTAATGGAACAGCAATATCAGCAGGAGGTGATGATGCTTGCTACTCTGAAGCACCCAAATATTGTCCGGTTTATTGGATCATGCCATAAGCCAATGGTTTGGTGCATTGTTACTGAATATGCAAAGGGTGGTTCAGTTAGGCAGTTCTTGATGAAGCGACAAAGTCGCTCTGTCCCATTGAAATTAGCTGTCAAACAAGCTTTGGATGTTGCCAGGGGGATGGAATATGTTCATGGCCTTGGGTTGATTCACAGGGACTTGAAATCAGATAACCTTTTGATTTTTGCAGACAAGTCTATCAAAGTTGCTGACTTTGGAGTGGCTCGGATTGAGGTGCAGACAGAGGGCATGACACCTGAGACTGGAACCTACCGCTGGATGGCTCCGGAGATGATCCAACACAGGCCTTACACCCAAAAGGTGGACTTGTATAGCTTTGGTATCGTTCTGTGGGAGCTCATTACTGGAATGCTTCCATTCCAGAACATGACAGCCGTTCAGGCTGCTTTTGCAGTTGTTAACAAGGGAGTTCGTCCTATCATTCCCAATGATTGCTTGCCTGTTTTGAGCGACATCATGACCCGGTGCTGGGATGCCAACCCTGATGTTAGGCCATCATTTTCCGAGGTCGTTCGAATGCTAGAGAATGCACAGACTGAGATCATGACAACTGTCCGTAAAGCTCGTTTCAGAAGTCCTGGAGACTGTTGA 1242 45.25 MVPGKMLEGGQKFPGMIDLNEHAYDLSQGFYHKLGEGTNMSIDSFASLQTSNDGGSVAMSLDNSSVGSNESHTRILNHQGLRRRANDNHTFQHSVNHRGRVRHHLSDDALARALFDSNTPTQGLENFEKWTLDLRKLNMGEAFAQGAFGKLYRGTYDGEDVAIKILERPENDVEKAQLMEQQYQQEVMMLATLKHPNIVRFIGSCHKPMVWCIVTEYAKGGSVRQFLMKRQSRSVPLKLAVKQALDVARGMEYVHGLGLIHRDLKSDNLLIFADKSIKVADFGVARIEVQTEGMTPETGTYRWMAPEMIQHRPYTQKVDLYSFGIVLWELITGMLPFQNMTAVQAAFAVVNKGVRPIIPNDCLPVLSDIMTRCWDANPDVRPSFSEVVRMLENAQTEIMTTVRKARFRSPGDC 413
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 4407567 4419493 - Cp4.1LG11g06600.1 Cpe11g00660 477454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe11g00660 413 CDD STKc_MAP3K-like 144 391 - -
Cpe11g00660 413 Pfam Protein tyrosine and serine/threonine kinase 138 391 IPR001245 GO:0004672|GO:0006468
Cpe11g00660 413 PRINTS Tyrosine kinase catalytic domain signature 215 228 IPR001245 GO:0004672|GO:0006468
Cpe11g00660 413 PRINTS Tyrosine kinase catalytic domain signature 362 384 IPR001245 GO:0004672|GO:0006468
Cpe11g00660 413 PRINTS Tyrosine kinase catalytic domain signature 253 271 IPR001245 GO:0004672|GO:0006468
Cpe11g00660 413 PRINTS Tyrosine kinase catalytic domain signature 299 309 IPR001245 GO:0004672|GO:0006468
Cpe11g00660 413 PRINTS Tyrosine kinase catalytic domain signature 318 340 IPR001245 GO:0004672|GO:0006468
Cpe11g00660 413 SUPERFAMILY Protein kinase-like (PK-like) 122 391 IPR011009 -
Cpe11g00660 413 Gene3D Phosphorylase Kinase; domain 1 126 219 - -
Cpe11g00660 413 Gene3D Transferase(Phosphotransferase) domain 1 220 409 - -
Cpe11g00660 413 SMART serkin_6 137 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe11g00660 413 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE 7 406 - -
Cpe11g00660 413 ProSitePatterns Serine/Threonine protein kinases active-site signature. 259 271 IPR008271 GO:0004672|GO:0006468
Cpe11g00660 413 ProSiteProfiles Protein kinase domain profile. 137 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe11g00660 413 PANTHER SERINE-THREONINE PROTEIN KINASE 7 406 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe11g00660 Cpe-Chr11:4407567 Cpe19g00939 Cpe-Chr19:6724858 7.19E-100 dispersed
Cpe18g00839 Cpe-Chr18:7743553 Cpe11g00660 Cpe-Chr11:4407567 5.99E-73 dispersed
Cpe20g00437 Cpe-Chr20:2510681 Cpe11g00660 Cpe-Chr11:4407567 1.15E-86 dispersed
Cpe10g00364 Cpe-Chr10:2149244 Cpe11g00660 Cpe-Chr11:4407567 1.19E-20 transposed
Cpe11g00660 Cpe-Chr11:4407567 Cpe07g00777 Cpe-Chr7:6873917 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62716 PF07714 PK_Tyr_Ser-Thr 1.60E-65 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe11g00660 - - csv:101213713 805.053