Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe11g00660 | ATGGTGCCTGGAAAAATGTTGGAGGGTGGTCAAAAATTCCCTGGAATGATCGATTTAAACGAGCATGCATATGATCTATCACAAGGGTTTTACCATAAACTTGGTGAGGGAACCAATATGTCTATTGACAGCTTTGCAAGCTTGCAAACGAGCAATGATGGAGGCTCAGTTGCCATGTCTTTAGATAACAGCAGTGTTGGATCGAATGAGTCTCATACTCGGATCTTAAATCACCAAGGGTTGCGGCGGCGTGCAAATGATAACCATACTTTTCAACATAGTGTTAACCATCGTGGAAGAGTTAGACATCACCTGAGTGATGATGCACTAGCCCGAGCTTTATTTGATAGTAATACACCCACCCAGGGTCTTGAAAATTTTGAGAAGTGGACTCTTGATTTAAGGAAACTTAATATGGGGGAGGCTTTTGCTCAAGGTGCCTTTGGAAAACTCTACAGAGGTACTTATGATGGCGAAGATGTCGCTATCAAGATCTTGGAGAGGCCAGAGAATGACGTAGAGAAGGCTCAGTTAATGGAACAGCAATATCAGCAGGAGGTGATGATGCTTGCTACTCTGAAGCACCCAAATATTGTCCGGTTTATTGGATCATGCCATAAGCCAATGGTTTGGTGCATTGTTACTGAATATGCAAAGGGTGGTTCAGTTAGGCAGTTCTTGATGAAGCGACAAAGTCGCTCTGTCCCATTGAAATTAGCTGTCAAACAAGCTTTGGATGTTGCCAGGGGGATGGAATATGTTCATGGCCTTGGGTTGATTCACAGGGACTTGAAATCAGATAACCTTTTGATTTTTGCAGACAAGTCTATCAAAGTTGCTGACTTTGGAGTGGCTCGGATTGAGGTGCAGACAGAGGGCATGACACCTGAGACTGGAACCTACCGCTGGATGGCTCCGGAGATGATCCAACACAGGCCTTACACCCAAAAGGTGGACTTGTATAGCTTTGGTATCGTTCTGTGGGAGCTCATTACTGGAATGCTTCCATTCCAGAACATGACAGCCGTTCAGGCTGCTTTTGCAGTTGTTAACAAGGGAGTTCGTCCTATCATTCCCAATGATTGCTTGCCTGTTTTGAGCGACATCATGACCCGGTGCTGGGATGCCAACCCTGATGTTAGGCCATCATTTTCCGAGGTCGTTCGAATGCTAGAGAATGCACAGACTGAGATCATGACAACTGTCCGTAAAGCTCGTTTCAGAAGTCCTGGAGACTGTTGA | 1242 | 45.25 | MVPGKMLEGGQKFPGMIDLNEHAYDLSQGFYHKLGEGTNMSIDSFASLQTSNDGGSVAMSLDNSSVGSNESHTRILNHQGLRRRANDNHTFQHSVNHRGRVRHHLSDDALARALFDSNTPTQGLENFEKWTLDLRKLNMGEAFAQGAFGKLYRGTYDGEDVAIKILERPENDVEKAQLMEQQYQQEVMMLATLKHPNIVRFIGSCHKPMVWCIVTEYAKGGSVRQFLMKRQSRSVPLKLAVKQALDVARGMEYVHGLGLIHRDLKSDNLLIFADKSIKVADFGVARIEVQTEGMTPETGTYRWMAPEMIQHRPYTQKVDLYSFGIVLWELITGMLPFQNMTAVQAAFAVVNKGVRPIIPNDCLPVLSDIMTRCWDANPDVRPSFSEVVRMLENAQTEIMTTVRKARFRSPGDC | 413 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 4407567 | 4419493 | - | Cp4.1LG11g06600.1 | Cpe11g00660 | 477454 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe11g00660 | 413 | CDD | STKc_MAP3K-like | 144 | 391 | - | - | |
Cpe11g00660 | 413 | Pfam | Protein tyrosine and serine/threonine kinase | 138 | 391 | IPR001245 | GO:0004672|GO:0006468 | |
Cpe11g00660 | 413 | PRINTS | Tyrosine kinase catalytic domain signature | 215 | 228 | IPR001245 | GO:0004672|GO:0006468 | |
Cpe11g00660 | 413 | PRINTS | Tyrosine kinase catalytic domain signature | 362 | 384 | IPR001245 | GO:0004672|GO:0006468 | |
Cpe11g00660 | 413 | PRINTS | Tyrosine kinase catalytic domain signature | 253 | 271 | IPR001245 | GO:0004672|GO:0006468 | |
Cpe11g00660 | 413 | PRINTS | Tyrosine kinase catalytic domain signature | 299 | 309 | IPR001245 | GO:0004672|GO:0006468 | |
Cpe11g00660 | 413 | PRINTS | Tyrosine kinase catalytic domain signature | 318 | 340 | IPR001245 | GO:0004672|GO:0006468 | |
Cpe11g00660 | 413 | SUPERFAMILY | Protein kinase-like (PK-like) | 122 | 391 | IPR011009 | - | |
Cpe11g00660 | 413 | Gene3D | Phosphorylase Kinase; domain 1 | 126 | 219 | - | - | |
Cpe11g00660 | 413 | Gene3D | Transferase(Phosphotransferase) domain 1 | 220 | 409 | - | - | |
Cpe11g00660 | 413 | SMART | serkin_6 | 137 | 399 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe11g00660 | 413 | PANTHER | SERINE/THREONINE-PROTEIN KINASE HT1-LIKE | 7 | 406 | - | - | |
Cpe11g00660 | 413 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 259 | 271 | IPR008271 | GO:0004672|GO:0006468 | |
Cpe11g00660 | 413 | ProSiteProfiles | Protein kinase domain profile. | 137 | 398 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe11g00660 | 413 | PANTHER | SERINE-THREONINE PROTEIN KINASE | 7 | 406 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe11g00660 | Cpe-Chr11:4407567 | Cpe19g00939 | Cpe-Chr19:6724858 | 7.19E-100 | dispersed | |
Cpe18g00839 | Cpe-Chr18:7743553 | Cpe11g00660 | Cpe-Chr11:4407567 | 5.99E-73 | dispersed | |
Cpe20g00437 | Cpe-Chr20:2510681 | Cpe11g00660 | Cpe-Chr11:4407567 | 1.15E-86 | dispersed | |
Cpe10g00364 | Cpe-Chr10:2149244 | Cpe11g00660 | Cpe-Chr11:4407567 | 1.19E-20 | transposed | |
Cpe11g00660 | Cpe-Chr11:4407567 | Cpe07g00777 | Cpe-Chr7:6873917 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
62716 | PF07714 | PK_Tyr_Ser-Thr | 1.60E-65 | CL0016 | Cpe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe11g00660 | - | - | csv:101213713 | 805.053 |