Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe11g00701 ATGGATCTCTCCAAGATTGCCAGGAAGCTCGATCTTTCCGACTCCGAAACCCTCACCCGGAAAGCTGGGGAATTTCGTCGCCTCTCCGATCTCCAGTTCAATTCTTCCGCTATTGGCGTTGGTGAGGTTTGCAAGGCCATAATCTGTTTGGAAATCGCCGCTACGAGATTAGGGATTTTATTTGATAGATCCAATGCTATCAAGTTAAGTGGGATGTCGGAAAAGGCGTATACCAGATCTTTCAATTTGTTTCAGAATGGTCTTGGTTTCAAAAGTAAGCTCGATATCAGAGAATTGGCAGTGCAGTTTGGGTGTGTTAGGCTGGTTGCTTCAGTTCAAAAGGGCTTATCTCTATACAAGGATCGGTTTGTTGCGTCACTGCCAGCTTCGCGACGCGCTAATGCCGACTTCTCCCGATCAGTATTTACGGCTGCAGCTTTTTACTTGTGTGCAAAAAAACACAAGCTGAAGGTTGACAAAGTTAAGCTCATTGAACTCAGTGGAACATCTGAATCTGAATTTTCATGTGTTGCTACTTCCATGAAGGACTTGTGCTTTGACGTCTTTGGAATTTCTAGTGAAAAGAAAGATCCCAGGGATGCCAAAGGGAACAGAGACATGTTAGATGCATTGCCAGAGAAAAGGAAACGTGAGGATGGCGGTTACTCTTCTGATGATAATGAAGAGACACGAGTCTCAAAGTTTTACGAATCCTCAGTTCTAACTCCACTGGTGGATTATCCATTTGAGCTTGAGAATGAAGATCTTGTAGGGAACTGTTTATTGATGTGTGAAGCTTTCTCCACTTATCCTAGGACGTATGATCTCATTCATGCCCATGCCATTTTCCGTTTGTACAAGGACAAATGCAAGATGGAGGACATTCTTCTGGAAATGGACAGGATTTTGAGACCGGAAGGAGCAGTGATATTCCGGGACGAAGTGGACGTACTTGTTAAGGTAAAGAAGATGATAGGAGGAATGAGATGGGATGCAAAAATGGTGGATCATGAGGATGGTCCTCTGGTGGCTGAGAAGATACTGGTTGCTGTGAAGCAGTATTGGGTCGTAGGTGGAAACAACTCCACATCACACTGA 1098 44.35 MDLSKIARKLDLSDSETLTRKAGEFRRLSDLQFNSSAIGVGEVCKAIICLEIAATRLGILFDRSNAIKLSGMSEKAYTRSFNLFQNGLGFKSKLDIRELAVQFGCVRLVASVQKGLSLYKDRFVASLPASRRANADFSRSVFTAAAFYLCAKKHKLKVDKVKLIELSGTSESEFSCVATSMKDLCFDVFGISSEKKDPRDAKGNRDMLDALPEKRKREDGGYSSDDNEETRVSKFYESSVLTPLVDYPFELENEDLVGNCLLMCEAFSTYPRTYDLIHAHAIFRLYKDKCKMEDILLEMDRILRPEGAVIFRDEVDVLVKVKKMIGGMRWDAKMVDHEDGPLVAEKILVAVKQYWVVGGNNSTSH 365
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 5037020 5045702 + Cp4.1LG11g07270.1 Cpe11g00701 477495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe11g00701 365 Pfam Origin recognition complex subunit 6 (ORC6) 3 92 IPR008721 GO:0003677|GO:0005664|GO:0006260
Cpe11g00701 365 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 264 339 IPR029063 -
Cpe11g00701 365 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 256 352 IPR004159 GO:0008168
Cpe11g00701 365 PANTHER BNAC05G50940D PROTEIN 1 228 - -
Cpe11g00701 365 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 6 1 228 IPR020529 GO:0005664|GO:0006260
Cpe11g00701 365 Gene3D - 91 188 - -
Cpe11g00701 365 MobiDBLite consensus disorder prediction 195 229 - -
Cpe11g00701 365 CDD Orc6_mid 92 188 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe11g00701 Cpe-Chr11:5037020 Cpe03g01708 Cpe-Chr3:12978748 8.19E-39 dispersed
Cpe11g00701 Cpe-Chr11:5037020 Cpe02g01355 Cpe-Chr2:11953038 6.17E-61 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe11g00701 K02608 - csv:101204841 396.356