Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe11g00745 ATGTCGATCTCTTCTTCCGATGACTGCTTTATTGACTCTCAATTACTCTGTGACGAGGACTCCTCCGATATTTTGTCCGGAGAGTCGCCAGAGTACTCCTCGGACCTTGAATCGCCTGCCAGTAGTGAGGATTCTATTGCTAGTTTCATAGAGGACGAGAGGCACTTCGTTCCTGGGATTGATTACTTGTCGCGCTTTCACTCTCAATCGCTCGATTCCTCCGCAAGAGCTGACTCTGTTGCATGGATTCTCAAGGTTCAAGCATATTACGGTTTTCAACCACTCACTGCATACCTTTCCGTCAATTACTTGGATCGATTCCTTTATTCTCGCCGCTTGCCGGAAACAAACGGGTGGCCATTGCAGCTTCTATCAGTGGCTTGTTTGTCACTTGCAGCTAAAATGGAGGAACCACTTGTTCCTTCGTTCCTGGATCTCCAGATCGAAGGAGCAAAATATATATTTGAACCTAGAACAATACGTAGGATGGAGCTTCTTGTGCTTACAACATTGGATTGGCGGCTCCGATCCGTAACCCCCTTCAGCTTCATCGGATTCTTCGCCTACAAAGTCGATCCCACCGGAACATTTTCCAGTTTTCTCATCTCACGCTCCACAGAAATCATTCTCTCCAATATTCGAGGTGACGCAAGCTTTCTTGAGTACTGGCCTTCCTGCATTGCTGCCGCAGCCTTACTTTGTGCGGCAAATGAAATACCCAATTTGACCCTTCTCAATCCTGAACATGCAGAGTCTTGGTGCAATGGGCTCAGCAAAGATAAAATCGTCGGGTGTTATCGACTAATGCAGCCATTAACATCGGAGAGTAGTCGTAGAAAGCCCCCAAAAGTGATACCGCAACTCCGAGTGAGAATCCGAGCTGGGTTGAGGTACAACAACTCGTCGTCGTCATCGTCATCGTCGACATCAACAAGGTTAGGTTATAAAAGGAGGAAGTTGAATAATTGCTTGTGGGTAGAAGAAGATGACAAAGAAAATTCCAAGTTTAGAGCAGAGGAATAA 1023 46.33 MSISSSDDCFIDSQLLCDEDSSDILSGESPEYSSDLESPASSEDSIASFIEDERHFVPGIDYLSRFHSQSLDSSARADSVAWILKVQAYYGFQPLTAYLSVNYLDRFLYSRRLPETNGWPLQLLSVACLSLAAKMEEPLVPSFLDLQIEGAKYIFEPRTIRRMELLVLTTLDWRLRSVTPFSFIGFFAYKVDPTGTFSSFLISRSTEIILSNIRGDASFLEYWPSCIAAAALLCAANEIPNLTLLNPEHAESWCNGLSKDKIVGCYRLMQPLTSESSRRKPPKVIPQLRVRIRAGLRYNNSSSSSSSSTSTRLGYKRRKLNNCLWVEEDDKENSKFRAEE 340
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 5841771 5844929 + Cp4.1LG11g07430.1 Cpe11g00745 477539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe11g00745 340 CDD CYCLIN 76 168 IPR013763 -
Cpe11g00745 340 PANTHER CYCLINS 24 316 IPR039361 -
Cpe11g00745 340 PANTHER CYCLIN-D1-1 24 316 - -
Cpe11g00745 340 MobiDBLite consensus disorder prediction 21 40 - -
Cpe11g00745 340 Pfam Cyclin, N-terminal domain 46 175 IPR006671 -
Cpe11g00745 340 SUPERFAMILY Cyclin-like 160 278 IPR036915 -
Cpe11g00745 340 SUPERFAMILY Cyclin-like 39 175 IPR036915 -
Cpe11g00745 340 Gene3D - 48 240 - -
Cpe11g00745 340 SMART cyclin_7 81 169 IPR013763 -
Cpe11g00745 340 Pfam Cyclin, C-terminal domain 178 283 IPR004367 -
Cpe11g00745 340 ProSitePatterns Cyclins signature. 76 107 IPR006671 -
Cpe11g00745 340 Gene3D - 59 176 - -
Cpe11g00745 340 MobiDBLite consensus disorder prediction 26 40 - -
Cpe11g00745 340 SMART Cyclin_C_2 178 307 IPR004367 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g00261 Cpe-Chr1:1491609 Cpe11g00745 Cpe-Chr11:5841771 3.83E-158 dispersed
Cpe01g01409 Cpe-Chr1:8468168 Cpe11g00745 Cpe-Chr11:5841771 6.28E-148 dispersed
Cpe07g00182 Cpe-Chr7:1142682 Cpe11g00745 Cpe-Chr11:5841771 1.15E-56 dispersed
Cpe11g00467 Cpe-Chr11:2638096 Cpe11g00745 Cpe-Chr11:5841771 4.93E-56 dispersed
Cpe11g00745 Cpe-Chr11:5841771 Cpe14g00259 Cpe-Chr14:1489945 4.54E-57 dispersed
Cpe10g00898 Cpe-Chr10:5044604 Cpe11g00745 Cpe-Chr11:5841771 1.33E-12 transposed
Cpe11g00745 Cpe-Chr11:5841771 Cpe07g00622 Cpe-Chr7:4311074 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe11g00745 K18810 - csv:101210686 593.964