Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe11g00862 ATGGAGGGAGATATCACAGCAATCATGGGGATGGTTATATTGCAAGTTTGCTACGCTGGTTTAAGCATTACCTCAAAGCTAGCCATGCAATCAGGAATGAACCCTCTTGTTCTTCTCACTTACAGGCAATTTTTTGGCACTTTGGCCATTGCTCCCTTTGCTTTCTTTACTGAAAGGAAAACAAGGCCAAAGATCACTTTCCCTGTTCTTGTTCAAATCTTTATCTGTTCTTTATCTGGACAAGAGAGTGTGAGAATCAAGACCAAGCCTGGTCTTGCAAAGGTGATGGGAACAATTGTGTGTATATGTGGAGCAATGCTGCTATCTTTCTACCATGGACACACCATTGGCTTAGGTGAATCAAAAATTCACTGGCCTTATGTCGAGAGGATCATGAGCAAAACAAACCCGACGAACCGTCAAGAAAACCGAACCCTCGGCTCGGTTTTGTTGCTTTGCAGCTCGTTCTCTTGGGCGTTATGGTTCGTCATTCAAGCAAGATTGAGTGTCAAGTTCAAAGCTCCTTATACAAGTACAACGTTGTTGTGCTTCATGGCCTTTTTCCAATGTGGACTCATAGCTGTAATTTCCGAGCACAACGTCGCTTCTTGGTCATTGAAAAGTCCGATCCGACTCATCTCGGCCCTTTACACGGGAATTGTGTGTTCGGGATTGACATTTAGCATCACTTCTTGGATTATACAAAGGAAAGGGCCTCTCTATGTCTCAATTTTCACCCCATTGTTGCTTATCATTGTGGCCATCTTTAGCTGGGCTCTCCTCCACGAACAACTCTACGTTGGAACTGTTCTTGGCTCGATTTTGATAATCATTGGGCTATATGGAGTGCTATGGGGAAAGTCCAAAGAGATGAAAGTAGAAGAGGAAGACAAGGTGGAAAAGGCAACAAATGGGAGTCAAAAAGATGACGTGGAATTGCAAATGAAATGA 951 43.43 MEGDITAIMGMVILQVCYAGLSITSKLAMQSGMNPLVLLTYRQFFGTLAIAPFAFFTERKTRPKITFPVLVQIFICSLSGQESVRIKTKPGLAKVMGTIVCICGAMLLSFYHGHTIGLGESKIHWPYVERIMSKTNPTNRQENRTLGSVLLLCSSFSWALWFVIQARLSVKFKAPYTSTTLLCFMAFFQCGLIAVISEHNVASWSLKSPIRLISALYTGIVCSGLTFSITSWIIQRKGPLYVSIFTPLLLIIVAIFSWALLHEQLYVGTVLGSILIIIGLYGVLWGKSKEMKVEEEDKVEKATNGSQKDDVELQMK 316
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 6998686 7001465 + Cp4.1LG11g08570.1 Cpe11g00862 477656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe11g00862 316 Pfam EamA-like transporter family 146 284 IPR000620 GO:0016020|GO:0016021
Cpe11g00862 316 MobiDBLite consensus disorder prediction 296 316 - -
Cpe11g00862 316 SUPERFAMILY Multidrug resistance efflux transporter EmrE 208 289 - -
Cpe11g00862 316 PANTHER WAT1-RELATED PROTEIN 81 311 IPR030184 GO:0016021|GO:0022857
Cpe11g00862 316 PANTHER WAT1-RELATED PROTEIN 7 80 IPR030184 GO:0016021|GO:0022857
Cpe11g00862 316 PANTHER WAT1-RELATED PROTEIN 81 311 - -
Cpe11g00862 316 PANTHER WAT1-RELATED PROTEIN 7 80 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe07g00844 Cpe11g00862 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe11g00862 Cpe-Chr11:6998686 Cpe08g01338 Cpe-Chr8:9650478 1.18E-53 dispersed
Cpe11g00862 Cpe-Chr11:6998686 Cpe11g00228 Cpe-Chr11:1217523 4.04E-60 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe11g00862 - - csv:101217670 457.218