Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe11g00870 | ATGAACTTTACAAGGGCCCTTGACTTTAATATTCAATCCGTCATTGTTGTTGACAAGTCTGGCAAAGGCAATTTCAAGACCATTCAAGCAGCCATCGACTCAGTTCCACTTAACAACAACAAATGGGTTAAGATTGAAGTCAACCCTGGTGAATACAGAGAAATGGTGACAATCCCGTCAACAAAATCATTCATTTATCTACAAGGGGGTCACCGCAGTACGACGGTTATCACTTTCGATGGTCATCAACAAACAAATACTAGCGCTACATTTAATTCAATGGCTGATAACATTATTGCAAGAGGCATTACTTTTGAGAACTCCTTCAACCTAGCAGATGCTCCACAGCTGTTTGATAAAATTACTGGAACTTTCTTTACACAAGCATTAGCTGCAAGAATCTACGGTGACAAATCGGCTTTTATCAGCTGTAGATTCAAAGGGTTTCAAGACACATTATGGGATGTAAAAGGCCGCCACTATTTCAAAAGTTGTTACATTGAAGGTGCCATAGATTTCATCTTTGGTAATGGTCAATCAATTTATGAGGGCTGCTTGATATATGTTAATGTTGGACTTCTCCCTGAAGTCAACCAAGGATACATTACTGCACAAGGTCGACAATCCGAAAACGATCCAAGCGGATTTGTATTTCAACAGTGCACCATAACGGGGTCGGGCAAAGCTTTTTTGGGGAGAGCATATGGTCCTTTTTCCAGAGTTATATTTAAAGATACGAACATGGGGAAAGTCGTAGCACCAGAGGGATGGGATGCTTGGCACTTCAAGGGCCAAGAGTAA | 801 | 40.95 | MNFTRALDFNIQSVIVVDKSGKGNFKTIQAAIDSVPLNNNKWVKIEVNPGEYREMVTIPSTKSFIYLQGGHRSTTVITFDGHQQTNTSATFNSMADNIIARGITFENSFNLADAPQLFDKITGTFFTQALAARIYGDKSAFISCRFKGFQDTLWDVKGRHYFKSCYIEGAIDFIFGNGQSIYEGCLIYVNVGLLPEVNQGYITAQGRQSENDPSGFVFQQCTITGSGKAFLGRAYGPFSRVIFKDTNMGKVVAPEGWDAWHFKGQE | 266 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 7042513 | 7043615 | + | Cp4.1LG11g08580.1 | Cpe11g00870 | 477664 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe11g00870 | 266 | Pfam | Pectinesterase | 15 | 261 | IPR000070 | GO:0030599|GO:0042545 | |
Cpe11g00870 | 266 | SUPERFAMILY | Pectin lyase-like | 12 | 261 | IPR011050 | - | |
Cpe11g00870 | 266 | Gene3D | - | 8 | 266 | IPR012334 | - | |
Cpe11g00870 | 266 | PANTHER | ACYL-COA THIOESTER HYDROLASE YBHC-RELATED | 10 | 264 | - | - | |
Cpe11g00870 | 266 | PANTHER | PECTINESTERASE | 10 | 264 | - | - | |
Cpe11g00870 | 266 | ProSitePatterns | Pectinesterase signature 2. | 167 | 176 | IPR033131 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe11g00870 | Cpe-Chr11:7042513 | Cpe11g00872 | Cpe-Chr11:7067094 | 4.29E-134 | dispersed | |
Cpe11g00870 | Cpe-Chr11:7042513 | Cpe11g00871 | Cpe-Chr11:7055176 | 0 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe11g00870 | - | - | cmos:111450826 | 528.865 |