Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe11g00876 | ATGGAAGGCCCTCTGTTGCGAGAAGTGTGCGCCCTGTACGACCAAATCTCGAGCCTTGCTAGCCTCAAGCCTTCCAAAAATGTCGACACTCTCTTCACCCAACTAGTCCTCACGTGCTCCCCGCCCGCCCCTGGCCTTGATATCGCCTCTTTGCCTCAGCCACTTCAAGCCATGAGGGCTCATCTCATCCGTCTCTGCGCCACCGCTGAGGCGCTTCTTGAAGTTCATTTCTCTTCCATTTTGGCTTCCTTTGAGAATCCCATTCATAACTTGTCTATCTTTCCTTATTACTCTAATTACTTGAAGCTCTCGCTTCTCGAGTTCGATATTCTTACCTCTCATTGTCGTCGGGTGCCCTCTAGCGTTGCGTTCGTTGGCTCTGGCCCCCTCCCGCTTTCCTCCATTGTCATGGCGTCCACTCATCTTAAGGGTACTATTTTCCACAACTTTGACATCGACCCAGCTGCAAACACCATGGCGGGGCAATTGGTTTGTTCGGACTCAGATTTATCGAAGCGGATGGTGTTTCACACGGCAGATGTAATGGAGGTGACGGAGGCGTTTGGAGAGTACGAGGTGGTGTTTTTAGCAGCATTGGTAGGGTTGGAGGAGGAAGAGAAAGGGAGGGTTTTGAGGCATTTAGGGAAGCACATGGCGCCCGGAGCTTATTTGATGCTAAGGAGTGCACATGGAGCTAGAGCATTTCTCTACCCTGTTGTCGACGTTCGTGACGTCGAAGCATCTGGGTTCGAGATTTTGTCCGTATTTCACCCTACTGATGAAGTTATAAACTCCGTTGTTATTGCAAGAAAGGTGACTGATCTCGTTCCTGACAACGATAATTATAACGACAACGACACAGATGATGAAAAACGAGCTGTTTTAGTTAACGCCCCTATAATATTAGCCGAGAAGTGCTCGGGGTTTAAAGACTTCGGTCCCATGATCGAGGAGCTTGCCATAGAAGAACAACTTTCTTGA | 981 | 49.13 | MEGPLLREVCALYDQISSLASLKPSKNVDTLFTQLVLTCSPPAPGLDIASLPQPLQAMRAHLIRLCATAEALLEVHFSSILASFENPIHNLSIFPYYSNYLKLSLLEFDILTSHCRRVPSSVAFVGSGPLPLSSIVMASTHLKGTIFHNFDIDPAANTMAGQLVCSDSDLSKRMVFHTADVMEVTEAFGEYEVVFLAALVGLEEEEKGRVLRHLGKHMAPGAYLMLRSAHGARAFLYPVVDVRDVEASGFEILSVFHPTDEVINSVVIARKVTDLVPDNDNYNDNDTDDEKRAVLVNAPIILAEKCSGFKDFGPMIEELAIEEQLS | 326 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 7106470 | 7108036 | - | Cp4.1LG11g08810.1 | Cpe11g00876 | 477670 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe11g00876 | 326 | ProSiteProfiles | Nicotianamine synthase (NAS)-like family profile. | 1 | 276 | IPR004298 | GO:0030410|GO:0030418 | |
Cpe11g00876 | 326 | PANTHER | NICOTIANAMINE SYNTHASE 3 | 4 | 276 | IPR004298 | GO:0030410|GO:0030418 | |
Cpe11g00876 | 326 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 133 | 258 | IPR029063 | - | |
Cpe11g00876 | 326 | Pfam | Nicotianamine synthase protein | 5 | 273 | IPR004298 | GO:0030410|GO:0030418 | |
Cpe11g00876 | 326 | Gene3D | Vaccinia Virus protein VP39 | 12 | 273 | IPR029063 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe04g00225 | Cpe11g00876 | CCT | |
Cpe07g00861 | Cpe11g00876 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe04g00225 | Cpe-Chr4:2724894 | Cpe11g00876 | Cpe-Chr11:7106470 | 8.26E-126 | transposed | |
Cpe18g00614 | Cpe-Chr18:6427881 | Cpe11g00876 | Cpe-Chr11:7106470 | 2.93E-94 | transposed | |
Cpe11g00876 | Cpe-Chr11:7106470 | Cpe07g00861 | Cpe-Chr7:7787265 | 4.74E-107 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe11g00876 | K05953 | - | csv:101203651 | 469.929 |