Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe11g00876 ATGGAAGGCCCTCTGTTGCGAGAAGTGTGCGCCCTGTACGACCAAATCTCGAGCCTTGCTAGCCTCAAGCCTTCCAAAAATGTCGACACTCTCTTCACCCAACTAGTCCTCACGTGCTCCCCGCCCGCCCCTGGCCTTGATATCGCCTCTTTGCCTCAGCCACTTCAAGCCATGAGGGCTCATCTCATCCGTCTCTGCGCCACCGCTGAGGCGCTTCTTGAAGTTCATTTCTCTTCCATTTTGGCTTCCTTTGAGAATCCCATTCATAACTTGTCTATCTTTCCTTATTACTCTAATTACTTGAAGCTCTCGCTTCTCGAGTTCGATATTCTTACCTCTCATTGTCGTCGGGTGCCCTCTAGCGTTGCGTTCGTTGGCTCTGGCCCCCTCCCGCTTTCCTCCATTGTCATGGCGTCCACTCATCTTAAGGGTACTATTTTCCACAACTTTGACATCGACCCAGCTGCAAACACCATGGCGGGGCAATTGGTTTGTTCGGACTCAGATTTATCGAAGCGGATGGTGTTTCACACGGCAGATGTAATGGAGGTGACGGAGGCGTTTGGAGAGTACGAGGTGGTGTTTTTAGCAGCATTGGTAGGGTTGGAGGAGGAAGAGAAAGGGAGGGTTTTGAGGCATTTAGGGAAGCACATGGCGCCCGGAGCTTATTTGATGCTAAGGAGTGCACATGGAGCTAGAGCATTTCTCTACCCTGTTGTCGACGTTCGTGACGTCGAAGCATCTGGGTTCGAGATTTTGTCCGTATTTCACCCTACTGATGAAGTTATAAACTCCGTTGTTATTGCAAGAAAGGTGACTGATCTCGTTCCTGACAACGATAATTATAACGACAACGACACAGATGATGAAAAACGAGCTGTTTTAGTTAACGCCCCTATAATATTAGCCGAGAAGTGCTCGGGGTTTAAAGACTTCGGTCCCATGATCGAGGAGCTTGCCATAGAAGAACAACTTTCTTGA 981 49.13 MEGPLLREVCALYDQISSLASLKPSKNVDTLFTQLVLTCSPPAPGLDIASLPQPLQAMRAHLIRLCATAEALLEVHFSSILASFENPIHNLSIFPYYSNYLKLSLLEFDILTSHCRRVPSSVAFVGSGPLPLSSIVMASTHLKGTIFHNFDIDPAANTMAGQLVCSDSDLSKRMVFHTADVMEVTEAFGEYEVVFLAALVGLEEEEKGRVLRHLGKHMAPGAYLMLRSAHGARAFLYPVVDVRDVEASGFEILSVFHPTDEVINSVVIARKVTDLVPDNDNYNDNDTDDEKRAVLVNAPIILAEKCSGFKDFGPMIEELAIEEQLS 326
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 7106470 7108036 - Cp4.1LG11g08810.1 Cpe11g00876 477670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe11g00876 326 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 1 276 IPR004298 GO:0030410|GO:0030418
Cpe11g00876 326 PANTHER NICOTIANAMINE SYNTHASE 3 4 276 IPR004298 GO:0030410|GO:0030418
Cpe11g00876 326 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 133 258 IPR029063 -
Cpe11g00876 326 Pfam Nicotianamine synthase protein 5 273 IPR004298 GO:0030410|GO:0030418
Cpe11g00876 326 Gene3D Vaccinia Virus protein VP39 12 273 IPR029063 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe04g00225 Cpe11g00876 CCT
Cpe07g00861 Cpe11g00876 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe04g00225 Cpe-Chr4:2724894 Cpe11g00876 Cpe-Chr11:7106470 8.26E-126 transposed
Cpe18g00614 Cpe-Chr18:6427881 Cpe11g00876 Cpe-Chr11:7106470 2.93E-94 transposed
Cpe11g00876 Cpe-Chr11:7106470 Cpe07g00861 Cpe-Chr7:7787265 4.74E-107 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe11g00876 K05953 - csv:101203651 469.929