Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe11g00894 ATGCGAAAAGGAAAGACTCGATATTGTGCACCACTGGTGTCGTCAATGCCGAAGGTTCGAATACTTTTGCTTCGGTGTTCTCGAAAAAAGGCGAAAAAGGAGTTAACCAAGATTGCTGCANACATAACGGAGGAATTTGGATGCCAAGAAGACTTGATATTTTGTGGGGTTTTCGATGGGCACGGACCGTGGGGTCATTTCGTTGCGAAGGCGGTAAGAGAATCGATGCCACCATCTTTGCTGTGCCATTGGCAGCAAGGACTTGCTCAAGCTTTCCTCGACCCGGAATTGGATTCAGAAAAGAAGCATCAGCGGTTCGACATATGGAAGCATTCCTATTTAAGAACTTGTGCTGCCATCGATCACGAACTCGAACAGCACCGTAAAATCGATACGTTTTACAGTGGAACAACTGCACTGTCCATTGTTAAACAGGGCGAGCTAGTCGTTTTAGCCAACGTTGGCGACTCCCGAGCAGTCTTGGGTACTACTTCTGATGATGGAAGTGTAGTACCGGTTCAGCTCACCGTCGACTTCAAACCGAACCTACCTCAGGAGGCCGAGCGGATAATTCAATGCAATGGGAGGGTGTTTTGTTTAAACGACGAGCCGGGAGTTCATAGGGTCTGGCTTCCGAACGAGGAAACGCCCGGGTTGGCGATGTCGAGAGCCTTCGGTGATTATTGTATTAAAGAATTTGGACTCATTTCTGTGCCAGAAGTTACATATAGAAGTATTACCAGCAGAGACCAATTCATTATATTGGCAACTGATGGGGTATGGGATGTTGTCACCAACCAAGAAGCAGTGGAGATTGTATCATCGACACCGGATAGAACAAAATCGTCGAAACGTCTGGTCGAGTGTGCTGTTCGGGCATGGAAACGGAAGAGACGAGGCATTGCAATGGATGATATGTCAGCTATCTGCCTCTTCTTCCACTCATCAGAGCAAGAACATCACCTTGTAACTTATTAG 978 47.03 MRKGKTRYCAPLVSSMPKVRILLLRCSRKKAKKELTKIAAXITEEFGCQEDLIFCGVFDGHGPWGHFVAKAVRESMPPSLLCHWQQGLAQAFLDPELDSEKKHQRFDIWKHSYLRTCAAIDHELEQHRKIDTFYSGTTALSIVKQGELVVLANVGDSRAVLGTTSDDGSVVPVQLTVDFKPNLPQEAERIIQCNGRVFCLNDEPGVHRVWLPNEETPGLAMSRAFGDYCIKEFGLISVPEVTYRSITSRDQFIILATDGVWDVVTNQEAVEIVSSTPDRTKSSKRLVECAVRAWKRKRRGIAMDDMSAICLFFHSSEQEHHLVTY 325
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 7210013 7212362 - Cp4.1LG11g08970.1 Cpe11g00894 477688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe11g00894 325 SUPERFAMILY PP2C-like 39 314 IPR036457 -
Cpe11g00894 325 Pfam Protein phosphatase 2C 33 287 IPR001932 -
Cpe11g00894 325 PANTHER CATALYTIC/PROTEIN PHOSPHATASE TYPE 2C 28 320 - -
Cpe11g00894 325 PANTHER ALPHABET, ISOFORM E-RELATED 28 320 - -
Cpe11g00894 325 CDD PP2Cc 48 313 IPR001932 -
Cpe11g00894 325 Gene3D - 28 316 IPR036457 -
Cpe11g00894 325 SMART PP2C_4 13 311 IPR001932 -
Cpe11g00894 325 ProSiteProfiles PPM-type phosphatase domain profile. 23 313 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe11g00894 Cpe-Chr11:7210013 Cpe14g00830 Cpe-Chr14:6723905 3.33E-105 dispersed
Cpe18g00029 Cpe-Chr18:539064 Cpe11g00894 Cpe-Chr11:7210013 2.32E-67 transposed
Cpe11g00894 Cpe-Chr11:7210013 Cpe12g00295 Cpe-Chr12:1959552 4.86E-11 wgd
Cpe11g00894 Cpe-Chr11:7210013 Cpe07g00881 Cpe-Chr7:7926885 3.04E-31 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe11g00894 - - cmax:111493912 584.334