Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe11g00894 | ATGCGAAAAGGAAAGACTCGATATTGTGCACCACTGGTGTCGTCAATGCCGAAGGTTCGAATACTTTTGCTTCGGTGTTCTCGAAAAAAGGCGAAAAAGGAGTTAACCAAGATTGCTGCANACATAACGGAGGAATTTGGATGCCAAGAAGACTTGATATTTTGTGGGGTTTTCGATGGGCACGGACCGTGGGGTCATTTCGTTGCGAAGGCGGTAAGAGAATCGATGCCACCATCTTTGCTGTGCCATTGGCAGCAAGGACTTGCTCAAGCTTTCCTCGACCCGGAATTGGATTCAGAAAAGAAGCATCAGCGGTTCGACATATGGAAGCATTCCTATTTAAGAACTTGTGCTGCCATCGATCACGAACTCGAACAGCACCGTAAAATCGATACGTTTTACAGTGGAACAACTGCACTGTCCATTGTTAAACAGGGCGAGCTAGTCGTTTTAGCCAACGTTGGCGACTCCCGAGCAGTCTTGGGTACTACTTCTGATGATGGAAGTGTAGTACCGGTTCAGCTCACCGTCGACTTCAAACCGAACCTACCTCAGGAGGCCGAGCGGATAATTCAATGCAATGGGAGGGTGTTTTGTTTAAACGACGAGCCGGGAGTTCATAGGGTCTGGCTTCCGAACGAGGAAACGCCCGGGTTGGCGATGTCGAGAGCCTTCGGTGATTATTGTATTAAAGAATTTGGACTCATTTCTGTGCCAGAAGTTACATATAGAAGTATTACCAGCAGAGACCAATTCATTATATTGGCAACTGATGGGGTATGGGATGTTGTCACCAACCAAGAAGCAGTGGAGATTGTATCATCGACACCGGATAGAACAAAATCGTCGAAACGTCTGGTCGAGTGTGCTGTTCGGGCATGGAAACGGAAGAGACGAGGCATTGCAATGGATGATATGTCAGCTATCTGCCTCTTCTTCCACTCATCAGAGCAAGAACATCACCTTGTAACTTATTAG | 978 | 47.03 | MRKGKTRYCAPLVSSMPKVRILLLRCSRKKAKKELTKIAAXITEEFGCQEDLIFCGVFDGHGPWGHFVAKAVRESMPPSLLCHWQQGLAQAFLDPELDSEKKHQRFDIWKHSYLRTCAAIDHELEQHRKIDTFYSGTTALSIVKQGELVVLANVGDSRAVLGTTSDDGSVVPVQLTVDFKPNLPQEAERIIQCNGRVFCLNDEPGVHRVWLPNEETPGLAMSRAFGDYCIKEFGLISVPEVTYRSITSRDQFIILATDGVWDVVTNQEAVEIVSSTPDRTKSSKRLVECAVRAWKRKRRGIAMDDMSAICLFFHSSEQEHHLVTY | 325 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 7210013 | 7212362 | - | Cp4.1LG11g08970.1 | Cpe11g00894 | 477688 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe11g00894 | 325 | SUPERFAMILY | PP2C-like | 39 | 314 | IPR036457 | - | |
Cpe11g00894 | 325 | Pfam | Protein phosphatase 2C | 33 | 287 | IPR001932 | - | |
Cpe11g00894 | 325 | PANTHER | CATALYTIC/PROTEIN PHOSPHATASE TYPE 2C | 28 | 320 | - | - | |
Cpe11g00894 | 325 | PANTHER | ALPHABET, ISOFORM E-RELATED | 28 | 320 | - | - | |
Cpe11g00894 | 325 | CDD | PP2Cc | 48 | 313 | IPR001932 | - | |
Cpe11g00894 | 325 | Gene3D | - | 28 | 316 | IPR036457 | - | |
Cpe11g00894 | 325 | SMART | PP2C_4 | 13 | 311 | IPR001932 | - | |
Cpe11g00894 | 325 | ProSiteProfiles | PPM-type phosphatase domain profile. | 23 | 313 | IPR001932 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe11g00894 | Cpe-Chr11:7210013 | Cpe14g00830 | Cpe-Chr14:6723905 | 3.33E-105 | dispersed | |
Cpe18g00029 | Cpe-Chr18:539064 | Cpe11g00894 | Cpe-Chr11:7210013 | 2.32E-67 | transposed | |
Cpe11g00894 | Cpe-Chr11:7210013 | Cpe12g00295 | Cpe-Chr12:1959552 | 4.86E-11 | wgd | |
Cpe11g00894 | Cpe-Chr11:7210013 | Cpe07g00881 | Cpe-Chr7:7926885 | 3.04E-31 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe11g00894 | - | - | cmax:111493912 | 584.334 |