Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe11g00895 ATGTCGACGGAGAAATTGATTTCCAGTGGTACAACTCCGTCGGAAGCAGAGCCGCCGAGGTTGGCTTCATCGTCGCATTCGTTCCGGCAATGTGGAGAACCAGCTAGGGTTTTTGAGGAGCTGCCGATTGCTTCCATTGTATCGGTTTCACGGCCGGATACTGGAGATATCAGTCCCTTGCTGTTGTCTTACACTATTGAAATTCAATACAAACAGTTTAAATGGAGCTTAGTGAAGAAAGCCTCGCAAGTTCTATATTTACATTTTGCGCTGAAGAGACGTGCATTTATTGAAGAACTTCACGAGAAACAAGAGCAGGTTAAAGAATGGCTTCACAACTTGGGAATAGTAGACCATACAGCTGCAGTCCATCATGATGACGAGTCTGATGATGGGTTATTTCCTTTGCATGATGAACAAACAACAAAAAACAGGAATGTTCCTTCTGTTGCTGCTTTACCCATCATTAAGCCAGCAATGGGAGGACAGCGGTCCATTTCAGACAAGGCAAAGCTAGCAATGCAGGGTTACTTAAATCACTTCTTTGGGAACTTGGATATTGTAAATACTCGTGAGGTCTGCAAATTTTTAGAAGTCTCGAAGATGTCATTTGTAAGAGAACACGGTCCGAAGTTGAAAGAAGGTTACCTAATGGTGAAGCATTTGAAACAGCTGACAGGATCTGATTCTAGTATAAAATGTTTTGCATGTCATTGGTGCAGTTGCTGCGTGTACAATTGGAAAAAGGTTTGGGCTGTTTTGAAACCAGGTTTCTTGGCCTTGGTTGCTGATCCCATGGACACTAAACTCCTCGATATAATTGTTTTTGATGTTCTACAAACATTACAAGAGAAGGAGGGATCCCAAGCATGCTTAGCATATCATGTCAAGGAGCGCAATCCTTTACGTTATTCATTTAAGGTTAGAGGCGGAAATGGAAATCTGAGGTTCAGAACCACAAGTACCGCCAAAGTCAAAAAATGGGTCTCAGCAATTAATGATGCTGGGTTTAGATCCAAAGATGGCTGGTGCCACCCTCATCGCTTTGGTTCTTTTGCTCCTCAGAGAGGTTTGAGTGATGATGAAAGCCAAGCTCAGTGGTTCATAGATGGCCGGGCAGCTTTTGAAGCAATCGCTTGCTCTATTGAGGCTGCAAAATCTGAGATATTCATAACTGGTTGGTGGCTTTGCCCTGAGCTTTATATGCGACGTCCTTTTCACAATCATTCTTCTTCACGGCTTGATGCATTGCTGGAAACAAAGGCAAAAGAAGGTGTCAAGATTTACATCTTAATGTATAAAGAGGTCCCTATTGCTCTGAAAATTAACAGTAGGTATAGTAAGAAGAGGCTTCTAAATATTCATGAGAATATTAAGGTACTACGTTCTCCTGATCATATGTCAACTGGGATTTACTATTGGTCACATCATGAAAAACTTGTCATCGTTGATCACCACATTTGCTTCATTGGAGGTTTGGATTTGTGCTTTGGCCGCTATGATACAATGGAACATAAAGTGAGTGATTTCCCTCCTTATACATGGCCAGGAAAGGACTATTACAATCCAAGAGAATCTGAACCAAATTCTTGGGAAGACACAATGAGTGATGAATTGGAGCGGGAGAAGTGTCCTCGAATGCCATGGCATGATGTTCACTGTGCTCTTTGGGGATCTCCATGCCGTGATATTGCTCGTCACTTTGTTCAGAGGTGGAACCATGCCAAGAGAGATAAAGCCCCAAATGAAGAAAAAATACCTCTATTAATGCCTCAACATGACATGGTCCTTCCACATTACATGGGAAGAAGCACGGAGTTGAGTTTCAAAAGTAAAGGCTCAGAGCAAGATCATCAAAAGCAGAACACGGAAGATTTCTTTTTCTCCTCATCACCACAGGAAGATATTCCATTACTTATGCCTCAGGAAGTTGGTGGACTTCCAGATTCTAACATGGAAAGACATAGTCAAATGAACAAGCAAATGGAGATACAAAGTAGTGCTATGGATTCTTTCCAGGCATACAATGTTGAATCATTGACCCAATATGAACAAGCAAATGGATTGTTCGATGAATTTGGATTTTTGGATGAGTTTGGTGATTTTGGTCTTTCGAGGGAAGCTACTACTGCTGATACTCCGCCATATATGAAAACTTCAGATGATTGGTTGGAAACCGAACATGAAAGCAATCATGTTGTTGCTGTAAACGAGGTCAAAGAAATCGGTCCTCTTACTACCACCAATTGTCAGGTAATAAGAAGTGTCAGCCAGTGGTCAGCAGGAACAAGCAAACCAGAAGCAAGCATCCATGCTGCTTATTGTTCTGCCATTCAAGAGGCAAAACACTTCATCTACATTGAGAACCAGTTTTTCATATCAGGTTTATCGGGGGATGAGACCATCCACAATCGGGTTCTGGAAGCACTATACCAACGTATATGGCTGGCTCATAAAGAAAAACAATGTTTTAGAGTTATTATTGTTTTACCACTCTTACCTGGATTTCAGGGTGGTGTAGATGATAATGGTGCTGCAACTGTTCGAGCCTTGATGCATTGGCAGTATCGAACAATTAGTTGGGAAAAAACTTCGATATTGTACCGTCTCAATCTTTTACTGGGTTCTAAAACACAGGATTATATCTTGTTTTGTGGCCTCCGATCATATGGCAGGCTTTTTGATGGTGGTCCAATTGCCACTAGTCAGGTGTATGTGCACAGCAAATTAATGATAATCGATGATTGCATTACCTTTATTGGTTCCTCCAACATTAACGACAGAAGTTTACTTGGATCCAGAGATTCTGAGATTGGGGTGATCATCGAGGATAAAGAGTTTGTTGATTCATATATGAATGGAAAGCCATGGAAGGCTGGAAAATTCGCTCATAGTCTACGATGCTCCTTGTGGTGTGAGCACCTTGGTCTTCATCTCGGAGAGGTCAGTCAAATCCTTGATCCTATAGTCGAAGCAACGTACAAAGATTTATGGATAGCTACGGCAAAGGAAAACACAGCAATATATGAAGATGTCTTTTCTTGCATCCCCAACGACAACATAAACTCAAGATCATCTTTACGCCAAAGTTTGGCCGATTTGAAGTGCAAACTCGATCATAACACACTAGATTTAGGAATAGCTGCTGAGAAGATAGAAAACCATGAAAATGGGGAAGTAAAGATGATAGATCCAATGGAGAAACTGAAGTGTATTAGAGGACATCTGGTCTGTTTTCCATTGAAGTTCTTGTGGCAAGAAGATCTCAGACCAGGCTTCATTGAGAGTGAGTTTTATGCTGCCCCTCAAGTTTTTCATTGA 3321 41.49 MSTEKLISSGTTPSEAEPPRLASSSHSFRQCGEPARVFEELPIASIVSVSRPDTGDISPLLLSYTIEIQYKQFKWSLVKKASQVLYLHFALKRRAFIEELHEKQEQVKEWLHNLGIVDHTAAVHHDDESDDGLFPLHDEQTTKNRNVPSVAALPIIKPAMGGQRSISDKAKLAMQGYLNHFFGNLDIVNTREVCKFLEVSKMSFVREHGPKLKEGYLMVKHLKQLTGSDSSIKCFACHWCSCCVYNWKKVWAVLKPGFLALVADPMDTKLLDIIVFDVLQTLQEKEGSQACLAYHVKERNPLRYSFKVRGGNGNLRFRTTSTAKVKKWVSAINDAGFRSKDGWCHPHRFGSFAPQRGLSDDESQAQWFIDGRAAFEAIACSIEAAKSEIFITGWWLCPELYMRRPFHNHSSSRLDALLETKAKEGVKIYILMYKEVPIALKINSRYSKKRLLNIHENIKVLRSPDHMSTGIYYWSHHEKLVIVDHHICFIGGLDLCFGRYDTMEHKVSDFPPYTWPGKDYYNPRESEPNSWEDTMSDELEREKCPRMPWHDVHCALWGSPCRDIARHFVQRWNHAKRDKAPNEEKIPLLMPQHDMVLPHYMGRSTELSFKSKGSEQDHQKQNTEDFFFSSSPQEDIPLLMPQEVGGLPDSNMERHSQMNKQMEIQSSAMDSFQAYNVESLTQYEQANGLFDEFGFLDEFGDFGLSREATTADTPPYMKTSDDWLETEHESNHVVAVNEVKEIGPLTTTNCQVIRSVSQWSAGTSKPEASIHAAYCSAIQEAKHFIYIENQFFISGLSGDETIHNRVLEALYQRIWLAHKEKQCFRVIIVLPLLPGFQGGVDDNGAATVRALMHWQYRTISWEKTSILYRLNLLLGSKTQDYILFCGLRSYGRLFDGGPIATSQVYVHSKLMIIDDCITFIGSSNINDRSLLGSRDSEIGVIIEDKEFVDSYMNGKPWKAGKFAHSLRCSLWCEHLGLHLGEVSQILDPIVEATYKDLWIATAKENTAIYEDVFSCIPNDNINSRSSLRQSLADLKCKLDHNTLDLGIAAEKIENHENGEVKMIDPMEKLKCIRGHLVCFPLKFLWQEDLRPGFIESEFYAAPQVFH 1106
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 7223172 7232779 - Cp4.1LG11g08940.1 Cpe11g00895 477689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe11g00895 1106 SMART PH_update 211 339 IPR001849 -
Cpe11g00895 1106 CDD PLDc_vPLD1_2_yPLD_like_1 365 509 - -
Cpe11g00895 1106 Pfam PLD-like domain 775 951 IPR025202 -
Cpe11g00895 1106 CDD PLDc_vPLD1_2_yPLD_like_2 762 946 - -
Cpe11g00895 1106 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 902 929 IPR001736 GO:0003824
Cpe11g00895 1106 Gene3D Endonuclease Chain A 717 964 - -
Cpe11g00895 1106 ProSiteProfiles PH domain profile. 210 337 IPR001849 -
Cpe11g00895 1106 CDD PH_PLD 188 335 - -
Cpe11g00895 1106 SUPERFAMILY PH domain-like 208 341 - -
Cpe11g00895 1106 PANTHER PHOSPHOLIPASE D ZETA 2 26 1103 - -
Cpe11g00895 1106 SUPERFAMILY Phospholipase D/nuclease 743 952 - -
Cpe11g00895 1106 Gene3D - 202 341 IPR011993 -
Cpe11g00895 1106 SUPERFAMILY Phospholipase D/nuclease 337 592 - -
Cpe11g00895 1106 Pfam Phospholipase D Active site motif 474 499 IPR001736 GO:0003824
Cpe11g00895 1106 Gene3D Endonuclease Chain A 357 600 - -
Cpe11g00895 1106 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 472 499 IPR001736 GO:0003824
Cpe11g00895 1106 SMART pld_4 902 929 IPR001736 GO:0003824
Cpe11g00895 1106 SMART pld_4 472 499 IPR001736 GO:0003824
Cpe11g00895 1106 MobiDBLite consensus disorder prediction 1 27 - -
Cpe11g00895 1106 PIRSF PLD_euk 706 1106 IPR016555 GO:0004630|GO:0006654|GO:0048017
Cpe11g00895 1106 PIRSF PLD_euk 43 626 IPR016555 GO:0004630|GO:0006654|GO:0048017
Cpe11g00895 1106 PANTHER PHOSPHOLIPASE D 26 1103 IPR015679 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe11g00895 Cpe-Chr11:7223172 Cpe02g01720 Cpe-Chr2:14089946 9.09E-15 dispersed
Cpe11g00895 Cpe-Chr11:7223172 Cpe12g00294 Cpe-Chr12:1945418 0 wgd
Cpe11g00895 Cpe-Chr11:7223172 Cpe17g00040 Cpe-Chr17:254675 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe11g00895 K01115 - csv:101220522 2068.51