Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe11g00927 ATGACACCCATTTTGAACTATGTTGTGTCCAAATGGCAAGCGTTGTCCACTTCTGATCATGCCTCTGTGGTTTCCATCAACTTATTTGTGGCACTTCTCTGTGCTTGTATTGTGATTGGTCATCTTCTTGAGGAGACCCGATGGATGAATGAGTCGATCACTGCACTCCTGATTGGTATGTTTGCTGGAATAGTCATTTTACTGGTCAGTCGTGGGAAAAGTTCGCATTTGTTGCTTTTCAGCGAAGATACATTCTTTATTTATCTTCTGCCACCGATTATATTCAATGCGGGGTTTCAGGTGAAAAAGAAGCAGTTCTTTGTCAACTTTATGACAATTATGCTGTTTGGCGCAATTGGTACATTAGTCTCGTGTTTCATCATCTCGTTAGGAGCTTTTCAGTTCTTTAAGAAAATGGATGTTGGATCACTGGATATTGCTGATATTTTAGCGATTGGAGCTATATTTGCCGCAACGGATTCTGTATGCACACTTCAGATATTAAGCCAGGACGAAACCCCTCTACTCTACAGTCTCGTATTTGGGGAGGGCGTGGTCAATGACGCTACGTCTGTGGTGCTTTTCAATGCTATTCAAAGCATAGATCTCAGCAACATTGATGCAAGAGTTGCTATACATTTTCTTGGGAGCTTCTTTTATCTGTTTTCGACGAGCACTCTACTTGGAGTATTTGTTGGGCTGCTGAGTGCTTATATAATCAGAAAGTTATATTTTGGCAGGCACTCGACAGATCGTGAGGTCGCTCTTATGATACTCATGGCGTATCTTTCGTATATGCTGGCTGAATTACTAGATTTGAGTGGCATTCTCACAGTGTTCTTTTGTGGAATTGTAATGTCACATTATACCTGGCATAATGTGACTGAGAGCTCAAGAGTTACCACCAATCCGGGGACATCGGTTGCTGTGAGCGCAATGTTACTCGGCCTGGTTATGGTTGGAAGAGCTGCTTTTGTTTTTCCATTATCGTTTCTATCCAACTTAGCTAAAAAATCAGCAGACGAGAAAATTACATTCAGGGAACAAGTTATCATTTGGTGGGCTGGTCTCATGAGAGGGGCTGTCTCCATTGCTCTAGCTTATCACCAGTTCACCAGAGCAGGGCACACTCAACTACGAGGGAATGCGATGATGATCACTAGTACCGTAACCGTTGTCCTCTTCAGCACGATGGTGTTTGGATTATTGACCAAACCTCTTATTAAGTGTTTGATACCCCACCCGAAACTCACGACCAGCATGCTATCGGACCCTGCGACTCCAAAATCATTCTCGGTTCCGCTACTTGGAAGCGCACAAGATTCAGAGCTGGATCTTGACAGCCTCCATGTTCCTCGTCCAACGAGTATACGTGCATTCCTTGCAACTCCTACGCACACTGTGCATCGGTACTGGCGAAAGTTCGACGACGCCTTCATGCGTCCAATGTTTGGGGGTCGGGGTTTTGTTCCTTTTGTCCCAGGATCGCCAACCGAAAGGGGAGGGCATTGA 1512 44.58 MTPILNYVVSKWQALSTSDHASVVSINLFVALLCACIVIGHLLEETRWMNESITALLIGMFAGIVILLVSRGKSSHLLLFSEDTFFIYLLPPIIFNAGFQVKKKQFFVNFMTIMLFGAIGTLVSCFIISLGAFQFFKKMDVGSLDIADILAIGAIFAATDSVCTLQILSQDETPLLYSLVFGEGVVNDATSVVLFNAIQSIDLSNIDARVAIHFLGSFFYLFSTSTLLGVFVGLLSAYIIRKLYFGRHSTDREVALMILMAYLSYMLAELLDLSGILTVFFCGIVMSHYTWHNVTESSRVTTNPGTSVAVSAMLLGLVMVGRAAFVFPLSFLSNLAKKSADEKITFREQVIIWWAGLMRGAVSIALAYHQFTRAGHTQLRGNAMMITSTVTVVLFSTMVFGLLTKPLIKCLIPHPKLTTSMLSDPATPKSFSVPLLGSAQDSELDLDSLHVPRPTSIRAFLATPTHTVHRYWRKFDDAFMRPMFGGRGFVPFVPGSPTERGGH 503
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 7755738 7762736 - Cp4.1LG11g09280.1 Cpe11g00927 477721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe11g00927 503 PANTHER SODIUM/HYDROGEN EXCHANGER 2 303 502 - -
Cpe11g00927 503 PANTHER SODIUM/HYDROGEN EXCHANGER 2 7 302 - -
Cpe11g00927 503 PANTHER SODIUM/HYDROGEN EXCHANGER 303 502 IPR018422 GO:0006812|GO:0015299|GO:0016021
Cpe11g00927 503 PANTHER SODIUM/HYDROGEN EXCHANGER 7 302 IPR018422 GO:0006812|GO:0015299|GO:0016021
Cpe11g00927 503 PRINTS Na+/H+ exchanger signature 113 121 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Cpe11g00927 503 PRINTS Na+/H+ exchanger signature 153 163 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Cpe11g00927 503 PRINTS Na+/H+ exchanger signature 84 95 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Cpe11g00927 503 PRINTS Na+/H+ exchanger signature 98 112 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Cpe11g00927 503 Gene3D - 145 197 - -
Cpe11g00927 503 Pfam Sodium/hydrogen exchanger family 308 409 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Cpe11g00927 503 Pfam Sodium/hydrogen exchanger family 29 297 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe10g01238 Cpe-Chr10:9526308 Cpe11g00927 Cpe-Chr11:7755738 4.18E-24 dispersed
Cpe11g00927 Cpe-Chr11:7755738 Cpe12g00971 Cpe-Chr12:8191682 0 dispersed
Cpe04g00237 Cpe-Chr4:2910144 Cpe11g00927 Cpe-Chr11:7755738 0 transposed
Cpe11g00927 Cpe-Chr11:7755738 Cpe17g00001 Cpe-Chr17:13054 1.21E-165 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe11g00927 - - csv:101214934 877.856