Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe11g00936 | ATGCAAGATATCTTCGCTTCTGTTCGCCGATCATTGGTGTTTCGCGCTCCTCTTGAGAATGAAGATCCTCATTCCCCTGCAATTGGAGTTGGAGCCCTAGTTGATAAGATTAACTCCAGCATTCGGAAATCCAGAGTGTTTTCTAGGCACTCCCCGTCGTCCTCGGCTCTTCCTCCCATCCCCAAGGAAACTGACCCTCCGATTCGATGGCGCAAGGGCGAGTTGATTGGCTGCGGCGCCTTTGGCCGGGTGTATATGGGTATGAATCTTGGCTCTGGAGAGCTTCTCGCTGTTAAGCAGGTTCTGATTGCTGCAAATGGCGCTTCGAAGGAGAAAGCGCAGACTCACGTTAAGGAGCTTGAGGAAGAAGTGAAACTTCTCAAGGATCTTTCTCATCCAAATATTGTTAGATACTTGGGGACAGTCAGAGAGGATGATTCTTTAAATATATTATTGGAATTTGTCCCTGGTGGATCAATATCGTCACTTTTGGGGAAATTTGGAGCCTTTCCTGAAGCAGTTTTGAGAACATATACAAAACAGTTATTATTGGGATTGGAATATTTACACAAGAACGGTATCATGCACAGGGACATTAAGGGGGCGAATATCCTTGTAGATAACAATGGATGCATTAAGCTTGCTGATTTTGGGGCATCAAAACAAGTTGTCGAGCTGGCTACTATTTCAGGAGCAAAGTCTATGAAGGGCACTCCATATTGGATGGCTCCTGAAGTAATTCTGCAGACCGGGCATAATTTCTCTGCTGACATATGGAGTGTTGGATGCACTGTTATTGAGATGGCTACAGGAAAGCCTCCTTGGAGCCAACAGTATCAAGAGGTTGCTGCTCTTTTTCATATAGGCACAACGAAGTCTCATCCACCAATCCCTGAGCAGCTTTCGGTTGAAGCTAAAGATTTTCTGTTGAAATGTTTGCAAAAGGAACCAAACTTAAGACCAGCTGCCTCTGAACTCTTGAAGCATCCGTTTGTTACCGGGGAGGAGGCAGAATCTCAACTCGTGTCACGTGATGCATGCACGGACCCCATGGAAATCCATTCACCTTCGTATACTTCAAATTTTGAAATGAGTAAAACTCCAACATATCCTGGATCAAGTGATATTTGTAATTTGGATAGCCTGATCTGCTCAAAGGTATACACTGCAAACAAACTAGAAAGCGATATCTGGGCAGCAAACAGTGATGATGAAATGTGTCAGATTGATGACAAGGATGATTTAATGTTAGATGAAGTAAAAATCGGTTCTTCTATTGTACATGAGAATTTGAAGAGTTATAACCCAATTTGTGAGCCCTCCGATGATGAGGATTGCAAATTTGATAGAAGTCCAGCAGTAGACCAAGGAAGCAATTTAGAAGAGGAAGCTCTTGCAGCTAGAAGCTGTTCAGGAGTTTTTGACGAGGACCAGAACTTCTCATTTCCTAGGGGACGATCACTCTCTGAAGACGAGGATGAGCTTACTGAATCAAAAATTAAAGCTTTCTTGTATGAAAAGGCTCTTGAATTGAAGAAACTTCAGTCACCGCTTTATGAGGAATTCTACAATAGTTTGAATGCATCCTGCTCTCCAGTTTTTATTGAGAGTAAACGAGATGAAAGTACTCCCACATACTTGAAATTGCCTCCGAAAAGCCGGTCACCAAGTCGAAGTCCTGGTAATCCATCCCCAGCAATTGATGTTTTTGGCACTGGTAGCCCAGCTAGTGGTAGCAGGGGTAATGCAAATGATCAAAGATCACAACTCAGCGATTGGAAAGGACTTCTAGTTGATGGTCAGTCAGAAGCTGGTAGCCCGAGCAGCAAGCATTATTCTGATATACAAAGGAAGTGGAAAGAAGAGCTTGACCAAGAGCTTGAGAAAAAACGAGAGATGATGCGTCAAGCTGGTGGGGGAGGCAAAACTTCATCACCAAAGGATAAAGCCATGGGCCGACACAGAGAGCGGACAAGATTTGCATCTCCATTACGAACCGTTGACAGAGATGATGCATCGGGCGCTGGAAGGGAGAACAGGGAAAACATCATCTCCTGA | 2058 | 44.17 | MQDIFASVRRSLVFRAPLENEDPHSPAIGVGALVDKINSSIRKSRVFSRHSPSSSALPPIPKETDPPIRWRKGELIGCGAFGRVYMGMNLGSGELLAVKQVLIAANGASKEKAQTHVKELEEEVKLLKDLSHPNIVRYLGTVREDDSLNILLEFVPGGSISSLLGKFGAFPEAVLRTYTKQLLLGLEYLHKNGIMHRDIKGANILVDNNGCIKLADFGASKQVVELATISGAKSMKGTPYWMAPEVILQTGHNFSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPEQLSVEAKDFLLKCLQKEPNLRPAASELLKHPFVTGEEAESQLVSRDACTDPMEIHSPSYTSNFEMSKTPTYPGSSDICNLDSLICSKVYTANKLESDIWAANSDDEMCQIDDKDDLMLDEVKIGSSIVHENLKSYNPICEPSDDEDCKFDRSPAVDQGSNLEEEALAARSCSGVFDEDQNFSFPRGRSLSEDEDELTESKIKAFLYEKALELKKLQSPLYEEFYNSLNASCSPVFIESKRDESTPTYLKLPPKSRSPSRSPGNPSPAIDVFGTGSPASGSRGNANDQRSQLSDWKGLLVDGQSEAGSPSSKHYSDIQRKWKEELDQELEKKREMMRQAGGGGKTSSPKDKAMGRHRERTRFASPLRTVDRDDASGAGRENRENIIS | 685 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 7917148 | 7921637 | - | Cp4.1LG11g09360.1 | Cpe11g00936 | 477730 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe11g00936 | 685 | PANTHER | MAP KINASE KINASE KINASE SSK2-RELATED-RELATED | 1 | 613 | - | - | |
Cpe11g00936 | 685 | Gene3D | Transferase(Phosphotransferase) domain 1 | 69 | 366 | - | - | |
Cpe11g00936 | 685 | ProSitePatterns | Protein kinases ATP-binding region signature. | 76 | 99 | IPR017441 | GO:0005524 | |
Cpe11g00936 | 685 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 194 | 206 | IPR008271 | GO:0004672|GO:0006468 | |
Cpe11g00936 | 685 | ProSiteProfiles | Protein kinase domain profile. | 70 | 332 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe11g00936 | 685 | PANTHER | MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE NPK1-LIKE ISOFORM X1 | 1 | 613 | - | - | |
Cpe11g00936 | 685 | SUPERFAMILY | Protein kinase-like (PK-like) | 69 | 373 | IPR011009 | - | |
Cpe11g00936 | 685 | MobiDBLite | consensus disorder prediction | 613 | 636 | - | - | |
Cpe11g00936 | 685 | MobiDBLite | consensus disorder prediction | 647 | 685 | - | - | |
Cpe11g00936 | 685 | SMART | serkin_6 | 70 | 332 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe11g00936 | 685 | Coils | Coil | 616 | 636 | - | - | |
Cpe11g00936 | 685 | MobiDBLite | consensus disorder prediction | 575 | 591 | - | - | |
Cpe11g00936 | 685 | Coils | Coil | 110 | 130 | - | - | |
Cpe11g00936 | 685 | CDD | STKc_MAPKKK | 69 | 332 | - | - | |
Cpe11g00936 | 685 | MobiDBLite | consensus disorder prediction | 541 | 685 | - | - | |
Cpe11g00936 | 685 | Pfam | Protein kinase domain | 71 | 332 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe07g00907 | Cpe11g00936 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe11g00936 | Cpe-Chr11:7917148 | Cpe19g00525 | Cpe-Chr19:4459172 | 7.56E-90 | dispersed | |
Cpe12g00214 | Cpe-Chr12:1402800 | Cpe11g00936 | Cpe-Chr11:7917148 | 0 | transposed | |
Cpe19g00901 | Cpe-Chr19:6555014 | Cpe11g00936 | Cpe-Chr11:7917148 | 2.20E-19 | transposed | |
Cpe11g00936 | Cpe-Chr11:7917148 | Cpe07g00907 | Cpe-Chr7:8123321 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
62721 | PF00069 | Pkinase | 4.90E-71 | CL0016 | Cpe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe11g00936 | K20606 | - | csv:101209358 | 1192.95 |