Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe11g00936 ATGCAAGATATCTTCGCTTCTGTTCGCCGATCATTGGTGTTTCGCGCTCCTCTTGAGAATGAAGATCCTCATTCCCCTGCAATTGGAGTTGGAGCCCTAGTTGATAAGATTAACTCCAGCATTCGGAAATCCAGAGTGTTTTCTAGGCACTCCCCGTCGTCCTCGGCTCTTCCTCCCATCCCCAAGGAAACTGACCCTCCGATTCGATGGCGCAAGGGCGAGTTGATTGGCTGCGGCGCCTTTGGCCGGGTGTATATGGGTATGAATCTTGGCTCTGGAGAGCTTCTCGCTGTTAAGCAGGTTCTGATTGCTGCAAATGGCGCTTCGAAGGAGAAAGCGCAGACTCACGTTAAGGAGCTTGAGGAAGAAGTGAAACTTCTCAAGGATCTTTCTCATCCAAATATTGTTAGATACTTGGGGACAGTCAGAGAGGATGATTCTTTAAATATATTATTGGAATTTGTCCCTGGTGGATCAATATCGTCACTTTTGGGGAAATTTGGAGCCTTTCCTGAAGCAGTTTTGAGAACATATACAAAACAGTTATTATTGGGATTGGAATATTTACACAAGAACGGTATCATGCACAGGGACATTAAGGGGGCGAATATCCTTGTAGATAACAATGGATGCATTAAGCTTGCTGATTTTGGGGCATCAAAACAAGTTGTCGAGCTGGCTACTATTTCAGGAGCAAAGTCTATGAAGGGCACTCCATATTGGATGGCTCCTGAAGTAATTCTGCAGACCGGGCATAATTTCTCTGCTGACATATGGAGTGTTGGATGCACTGTTATTGAGATGGCTACAGGAAAGCCTCCTTGGAGCCAACAGTATCAAGAGGTTGCTGCTCTTTTTCATATAGGCACAACGAAGTCTCATCCACCAATCCCTGAGCAGCTTTCGGTTGAAGCTAAAGATTTTCTGTTGAAATGTTTGCAAAAGGAACCAAACTTAAGACCAGCTGCCTCTGAACTCTTGAAGCATCCGTTTGTTACCGGGGAGGAGGCAGAATCTCAACTCGTGTCACGTGATGCATGCACGGACCCCATGGAAATCCATTCACCTTCGTATACTTCAAATTTTGAAATGAGTAAAACTCCAACATATCCTGGATCAAGTGATATTTGTAATTTGGATAGCCTGATCTGCTCAAAGGTATACACTGCAAACAAACTAGAAAGCGATATCTGGGCAGCAAACAGTGATGATGAAATGTGTCAGATTGATGACAAGGATGATTTAATGTTAGATGAAGTAAAAATCGGTTCTTCTATTGTACATGAGAATTTGAAGAGTTATAACCCAATTTGTGAGCCCTCCGATGATGAGGATTGCAAATTTGATAGAAGTCCAGCAGTAGACCAAGGAAGCAATTTAGAAGAGGAAGCTCTTGCAGCTAGAAGCTGTTCAGGAGTTTTTGACGAGGACCAGAACTTCTCATTTCCTAGGGGACGATCACTCTCTGAAGACGAGGATGAGCTTACTGAATCAAAAATTAAAGCTTTCTTGTATGAAAAGGCTCTTGAATTGAAGAAACTTCAGTCACCGCTTTATGAGGAATTCTACAATAGTTTGAATGCATCCTGCTCTCCAGTTTTTATTGAGAGTAAACGAGATGAAAGTACTCCCACATACTTGAAATTGCCTCCGAAAAGCCGGTCACCAAGTCGAAGTCCTGGTAATCCATCCCCAGCAATTGATGTTTTTGGCACTGGTAGCCCAGCTAGTGGTAGCAGGGGTAATGCAAATGATCAAAGATCACAACTCAGCGATTGGAAAGGACTTCTAGTTGATGGTCAGTCAGAAGCTGGTAGCCCGAGCAGCAAGCATTATTCTGATATACAAAGGAAGTGGAAAGAAGAGCTTGACCAAGAGCTTGAGAAAAAACGAGAGATGATGCGTCAAGCTGGTGGGGGAGGCAAAACTTCATCACCAAAGGATAAAGCCATGGGCCGACACAGAGAGCGGACAAGATTTGCATCTCCATTACGAACCGTTGACAGAGATGATGCATCGGGCGCTGGAAGGGAGAACAGGGAAAACATCATCTCCTGA 2058 44.17 MQDIFASVRRSLVFRAPLENEDPHSPAIGVGALVDKINSSIRKSRVFSRHSPSSSALPPIPKETDPPIRWRKGELIGCGAFGRVYMGMNLGSGELLAVKQVLIAANGASKEKAQTHVKELEEEVKLLKDLSHPNIVRYLGTVREDDSLNILLEFVPGGSISSLLGKFGAFPEAVLRTYTKQLLLGLEYLHKNGIMHRDIKGANILVDNNGCIKLADFGASKQVVELATISGAKSMKGTPYWMAPEVILQTGHNFSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPEQLSVEAKDFLLKCLQKEPNLRPAASELLKHPFVTGEEAESQLVSRDACTDPMEIHSPSYTSNFEMSKTPTYPGSSDICNLDSLICSKVYTANKLESDIWAANSDDEMCQIDDKDDLMLDEVKIGSSIVHENLKSYNPICEPSDDEDCKFDRSPAVDQGSNLEEEALAARSCSGVFDEDQNFSFPRGRSLSEDEDELTESKIKAFLYEKALELKKLQSPLYEEFYNSLNASCSPVFIESKRDESTPTYLKLPPKSRSPSRSPGNPSPAIDVFGTGSPASGSRGNANDQRSQLSDWKGLLVDGQSEAGSPSSKHYSDIQRKWKEELDQELEKKREMMRQAGGGGKTSSPKDKAMGRHRERTRFASPLRTVDRDDASGAGRENRENIIS 685
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 7917148 7921637 - Cp4.1LG11g09360.1 Cpe11g00936 477730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe11g00936 685 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 613 - -
Cpe11g00936 685 Gene3D Transferase(Phosphotransferase) domain 1 69 366 - -
Cpe11g00936 685 ProSitePatterns Protein kinases ATP-binding region signature. 76 99 IPR017441 GO:0005524
Cpe11g00936 685 ProSitePatterns Serine/Threonine protein kinases active-site signature. 194 206 IPR008271 GO:0004672|GO:0006468
Cpe11g00936 685 ProSiteProfiles Protein kinase domain profile. 70 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe11g00936 685 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE NPK1-LIKE ISOFORM X1 1 613 - -
Cpe11g00936 685 SUPERFAMILY Protein kinase-like (PK-like) 69 373 IPR011009 -
Cpe11g00936 685 MobiDBLite consensus disorder prediction 613 636 - -
Cpe11g00936 685 MobiDBLite consensus disorder prediction 647 685 - -
Cpe11g00936 685 SMART serkin_6 70 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe11g00936 685 Coils Coil 616 636 - -
Cpe11g00936 685 MobiDBLite consensus disorder prediction 575 591 - -
Cpe11g00936 685 Coils Coil 110 130 - -
Cpe11g00936 685 CDD STKc_MAPKKK 69 332 - -
Cpe11g00936 685 MobiDBLite consensus disorder prediction 541 685 - -
Cpe11g00936 685 Pfam Protein kinase domain 71 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe07g00907 Cpe11g00936 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe11g00936 Cpe-Chr11:7917148 Cpe19g00525 Cpe-Chr19:4459172 7.56E-90 dispersed
Cpe12g00214 Cpe-Chr12:1402800 Cpe11g00936 Cpe-Chr11:7917148 0 transposed
Cpe19g00901 Cpe-Chr19:6555014 Cpe11g00936 Cpe-Chr11:7917148 2.20E-19 transposed
Cpe11g00936 Cpe-Chr11:7917148 Cpe07g00907 Cpe-Chr7:8123321 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62721 PF00069 Pkinase 4.90E-71 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe11g00936 K20606 - csv:101209358 1192.95