Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe11g00959 ATGTTGAGATTCCAAGTGGGCGGGAAGGTGGTCGAGAGAGTTGACTTGTTGAGGAAGAAACACTGGGCATGGCGGTTGGATCTGTGGCCATTCGCCATTCTTTATGTGGCCTGGCTTGCCGTCGTTGTTCCTAGTATAGACTTCGGGGATGCTCTCATTGTTTTAGGTGGACTGGCGGCTCTTCATGTTCTGGTCTTGCTTTTCACTGCTTGGTCGGTTGATTTCAAATGTTTTGTTCAGTACAGTCAGGTTAATGATATTTACCATGCTGATACATGCAAGATAGTTCCTGCAAAATTTTCAGGCTCGAAAGAAATTGTTCAGCTTCATTTTCGTAAGATTCTGGCCGGTTCTGCATCTGCAGTGGATACTGAGGAGATCTACTTTGATTTCAGAAAACAAAGATTTATTTATTCGAAGGAGAAGGAGACTTTCTGCAAGCTTCCTTACCCAACAAAAGAAACTGTTGGTTATTATCTAAAGAACACCGGCTATGGCTCTGAGCCTAAAGTTGTAGCTGCTGTTGAAAAATGGGGACGCAATATATTTGAGTATCCACAACCTACGTTCGTGAAATTAATGAAAGAGCAGTGTATGGAACCATTTTTTGTGTTTCAGGTTTTTTGTGTGGGGCTATGGTGTTTGGATGAGTATTGGTATTACAGCCTGTTTACTCTGTTTATGCTGTTTATGTTTGAGTCAACAATGGCAAAAAGTCGGTTAAAGACCTTAAGTGAGTTAAGGCGTGTTAGAGTGGATACTCAGACCTTAATGGTGCATCGTTGTGGAAAGTGGGTGAAGCTACCTGGAACTGAGCTTTTGCCAGGAGATGTTGTCTCTGTAGGGCGTGATTCTGGTCGGAGTGGTGAAGATAAGTCTGTACCTGCTGATATGCTTATCTTGGCTGGAAGTGCTATTGTTAATGAAGCCATTCTTACTGGGGAGTCTACACCACAATGGAAGGTTTCAATATCTGGGAGAGGAATTGAGGAGAAGTTATCAGCTAAAAGAGACAAAAGTCATATGTTATTTGGTGGGACCAAAATATTGCAGCATACTCCAGATAAGACCTTTCCTCTTAGAACCCCTGATGGTGGCTGCCTGGCAGTTGTTTTGAGGACTGGTTTCGAAACAAGTCAAGGGAAACTAATGCGCACAATTTTATTTTCTACGGAGAGGGTTACAGCTAACAGTTGGGAAAGTGGCCTATTTATTATGTTCTTAGTTGTATTTGCCGTTATAGCTGCTGGTTACGTACTTGTAAAGGGATTGGAAGATCCCACGAGAAGCAAGTACAAGCTTTTCCTTAGTTGCTCACTTATAATCACTTCTGTAATTCCTCCTGAACTACCAATGGAACTGTCAATAGCCGTTAATACATCATTAATTGCTCTGGCACGTCGGGGAATATTTTGTACAGAGCCTTTCCGAATACCATTTGCTGGAAAGGTTGATATTTGTTGTTTCGATAAAACAGGAACGTTGACATCAGATGACATGGAGTTTCGAGGAGTAGTTGGGGTGAGTGATAAGGATGATTTGGAAACTGACATGACTAGTGTGTCTTTGCGCACAGTTGAAATTCTGGCTTCTTGCCATGCATTGGTGTTTGTGGACAACAAGTTGGTGGGGGATCCTCTTGAAAAGGCTGCACTCAAGGGAGTTGATTGGGCTTACAAATCTGATGAGAAAGCCATTCCCAGAAAGGGAAGTGGGCACGCTGTCCAGATTGTTCAGAGGCACCACTTTGCTTCACATTTGAAGAGAATGGCAGTTGTTGTACGCCTTCAAGAGGAATTTCTTGCATTTGTGAAGGGTGCCCCCGAAACCATCCAGGAGAGGCTCACGGATATACCTTCATTTTATGTTGAGACGTATAAGAAATATACACGACAAGGTTCCCGTGTCCTTGCCCTTGCTTACAAATCACTTCCAGACATGACAGTTAGTGAAGCTAGAGCCCTGGATAGGGACGTGGTGGAGAGTGACCTTACATTTGCAGGTTTTGCGGTGTTCAATTGTCCAATTAGAGCAGATTCGGCTACAATATTATCTGAGCTTAAAGGATCATCCCATGACTTGGTAATGATTACTGGTGACCAAGCTTTAACAGCATGCCACGTAGCTAGCCAAGTTCATATTACCTCAAAGCAGATTTTAATTCTCAATTCAAAGAAGGGAACTGAGGAATATGAATGGCTCTCCCCAGATGAGTTACAGACAGTTCCCTACAGAGAGAAAGAGGTGGGAGATTTATCAGAGATGTATGATCTGTGTATTGGAGGTGACTGCATCGAAATGCTACAACGCACCTTCACTGTGCTGGATGTTATTCCATACGTTAAGGTTTTTGCAAGAGTTGCTCCTGAGCAGAAAGAACTCATATTGACCACTTTTAAGACAGTAGGAAGAATGACGTTGATGTGTGGGGATGGAACGAACGATGTCGGTGCTTTGAAACAGGCCCATGTAGGAATTGCTCTCCTGAACGCTGTCCCTCCTCAAAGTGGCAAGTCTTCTTCAGAAGCATCTAAAGACGACGCTGCTCGGTCTGCAAAGTCGAAGAAATCTAAGCTTTCATCCGAATCATCAGGAAAACCACTTCTAGCTGGAGAAGGTTCTTCAAAAAGCAAAGGTAGTGCAAAACTGGATTCTGCTACTGAGCAAGCTAGTAACCGCGCACGGACACCTGCGGAGATGCAAAGACAGAAGCTAAAGAAACTTATGGATGAGTTAAATGAAGAGGGTGATGGGCGCTCCGCCCCTATTGTCAAGCTTGGAGATGCATCCATGGCATCACCATTCACAGCAAAGCATGCTTCTGTTGCCCCGACTACGGACATTATTCGCCAAGGTCGAAGTACTCTGGTGACAACTCTTCAGATGTTTAAAATACTCGGTCTCAACTGCCTCGCTACCGCCTATGTACTCAGTGTTATGTATTTGGACGGTGTAAAGCTTGGCGATGTTCAAGCGACCATCAGTGGAGTATTCACAGCAGCCTTCTTTCTGTTCATCTCACATGCGCGCCCCCTTCCAACACTTTCAGCTGAACGCCCCCATCCACACATCTTTTGTTCTTATGTTCTCCTTTCTCTGTTAGGCCAATTTGCTATCCACTTATTTTTCTTGATGTCTTCAGTGAAAGAAGCCGAAAAGCACATGCCTGATGAATGTATAGAGCCAGATTCAGACTTTCATCCCAACTTGGTTAACACAGTTTCATACATGGTAAGCATGATGCTTCAGGTGGCAACCTTTGCTGTAAACTACATGGGTCATCCCTTCAACCAGAGCGTATCCGAAAATAAGCCATTCCTGTACGCTCTCTTGGCTGCGGTTGGTTTCTTCACCGTTATTACCTCGGATTTGTTCAGAGATCTCAACGACTGGCTGAAACTCGTTCCACTACCTGCGGGATTGAGGGATAAGCTTCTAGCTTGGGCACTTCTTATGTTCTTGTGCTGTTACTCCTGGGAAAGACTATTGAGATGGATGTTCCCGGGTAAAATCCCGGCATGGCGTAAGCGACAACGACTGGCGGCTGCGAATCTGGAGAAGAAGAAACAGCTGTGA 3576 44.32 MLRFQVGGKVVERVDLLRKKHWAWRLDLWPFAILYVAWLAVVVPSIDFGDALIVLGGLAALHVLVLLFTAWSVDFKCFVQYSQVNDIYHADTCKIVPAKFSGSKEIVQLHFRKILAGSASAVDTEEIYFDFRKQRFIYSKEKETFCKLPYPTKETVGYYLKNTGYGSEPKVVAAVEKWGRNIFEYPQPTFVKLMKEQCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSRLKTLSELRRVRVDTQTLMVHRCGKWVKLPGTELLPGDVVSVGRDSGRSGEDKSVPADMLILAGSAIVNEAILTGESTPQWKVSISGRGIEEKLSAKRDKSHMLFGGTKILQHTPDKTFPLRTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFIMFLVVFAVIAAGYVLVKGLEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDICCFDKTGTLTSDDMEFRGVVGVSDKDDLETDMTSVSLRTVEILASCHALVFVDNKLVGDPLEKAALKGVDWAYKSDEKAIPRKGSGHAVQIVQRHHFASHLKRMAVVVRLQEEFLAFVKGAPETIQERLTDIPSFYVETYKKYTRQGSRVLALAYKSLPDMTVSEARALDRDVVESDLTFAGFAVFNCPIRADSATILSELKGSSHDLVMITGDQALTACHVASQVHITSKQILILNSKKGTEEYEWLSPDELQTVPYREKEVGDLSEMYDLCIGGDCIEMLQRTFTVLDVIPYVKVFARVAPEQKELILTTFKTVGRMTLMCGDGTNDVGALKQAHVGIALLNAVPPQSGKSSSEASKDDAARSAKSKKSKLSSESSGKPLLAGEGSSKSKGSAKLDSATEQASNRARTPAEMQRQKLKKLMDELNEEGDGRSAPIVKLGDASMASPFTAKHASVAPTTDIIRQGRSTLVTTLQMFKILGLNCLATAYVLSVMYLDGVKLGDVQATISGVFTAAFFLFISHARPLPTLSAERPHPHIFCSYVLLSLLGQFAIHLFFLMSSVKEAEKHMPDECIEPDSDFHPNLVNTVSYMVSMMLQVATFAVNYMGHPFNQSVSENKPFLYALLAAVGFFTVITSDLFRDLNDWLKLVPLPAGLRDKLLAWALLMFLCCYSWERLLRWMFPGKIPAWRKRQRLAAANLEKKKQL 1191
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 8104297 8122151 - Cp4.1LG11g09570.1 Cpe11g00959 477753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe11g00959 1191 ProSitePatterns Hypothetical cof family signature 2. 809 831 - -
Cpe11g00959 1191 SFLD p-type atpase 469 954 IPR044492 -
Cpe11g00959 1191 MobiDBLite consensus disorder prediction 832 902 - -
Cpe11g00959 1191 Pfam haloacid dehalogenase-like hydrolase 485 713 - -
Cpe11g00959 1191 Pfam E1-E2 ATPase 256 468 - -
Cpe11g00959 1191 MobiDBLite consensus disorder prediction 878 898 - -
Cpe11g00959 1191 Coils Coil 895 915 - -
Cpe11g00959 1191 CDD P-type_ATPase_cation 170 1106 - -
Cpe11g00959 1191 SUPERFAMILY HAD-like 483 833 IPR036412 -
Cpe11g00959 1191 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 780 828 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cpe11g00959 1191 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 401 517 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cpe11g00959 1191 PANTHER CATION-TRANSPORTING ATPASE-RELATED 1 1183 - -
Cpe11g00959 1191 Gene3D - 224 388 - -
Cpe11g00959 1191 SUPERFAMILY Calcium ATPase, transduction domain A 256 387 IPR008250 -
Cpe11g00959 1191 PANTHER CATION-TRANSPORTING ATPASE 1 1183 - -
Cpe11g00959 1191 ProSitePatterns E1-E2 ATPases phosphorylation site. 490 496 IPR018303 -
Cpe11g00959 1191 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 494 678 IPR023299 GO:0000166
Cpe11g00959 1191 Gene3D - 483 668 IPR023299 GO:0000166
Cpe11g00959 1191 PRINTS P-type cation-transporting ATPase superfamily signature 308 322 - -
Cpe11g00959 1191 PRINTS P-type cation-transporting ATPase superfamily signature 488 502 - -
Cpe11g00959 1191 PRINTS P-type cation-transporting ATPase superfamily signature 690 700 - -
Cpe11g00959 1191 PRINTS P-type cation-transporting ATPase superfamily signature 809 828 - -
Cpe11g00959 1191 TIGRFAM P-ATPase-V: P-type ATPase of unknown pump specificity (type V) 42 1148 IPR006544 GO:0006812|GO:0016021|GO:0019829|GO:0140358
Cpe11g00959 1191 MobiDBLite consensus disorder prediction 843 860 - -
Cpe11g00959 1191 Gene3D - 669 847 IPR023214 -
Cpe11g00959 1191 SFLD C1.7: P-type atpase like 469 954 - -
Cpe11g00959 1191 SUPERFAMILY Calcium ATPase, transmembrane domain M 167 1168 IPR023298 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe11g00959 Cpe-Chr11:8104297 Cpe06g00200 Cpe-Chr6:1073086 1.75E-21 dispersed
Cpe11g00959 Cpe-Chr11:8104297 Cpe07g00925 Cpe-Chr7:8272260 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe11g00959 K14950 - csv:101215828 2187.92