Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe11g00963 ATGGGTGCTCAGAGAAAGGGGGCATCGCGGGTTTCCGAGGACTCCGAGGAGTTGGCACGAGTTTCGTTGCAGGCAGTTCTTCTTGCCGATAGCTTTACCACTAAGTTTCGTCCCATAACGCTTGAACGACCCAAGGTATTACTGCCGCTGGTAAATGTCCCTATGATTAATTATGCCTTATCCTGGCTCGAATCGGCTGGTGTTGAAGAGGTGTTTGTATTTTGCTGTGCTAACTCGAAACAAGTAATTGATTACTTGGAGAACTCTGAGTGGGTATCCCTACCAGACTTTGCAGTCACAACTATAGAGTCACACAACTCCATTAGTGCTGGAGACGCCCTGCGTTTGATCTATGAAAGAAATGTGATACATGGTGATTTTGTACTTATCACTGGAGACACCGTAAGCAACATGCCACTTACGCAAGCTCTTCAAGAACACAAAGATAGAAAGAAGAAAGATAGTAATGCCATCATGGGTTACAAGATTTACACACACGAAATTTGCTCAAGCTATGCAGCCAGAATCGATAATTATCGAAGCTATGACACCGTTAGTAAGGACATAATACAAAGGTGGACATATCCACTGGTACCGGATGTTAAATTCTTTGGGAATTCTGCTTATAAACTTGAAAGGCAGGGAATGTATCGAGCATCAGAAATACTGCAGGCACGCTCTGCACAGGTTGGTCCGTTTACTGTTATTGGAGATAACAGCAAAATTGGTGACAACACCAAAATTACGAATTCAATTATTGGGCAAGGTTGTAGCATTGGATCTAATGTTACAATTGAAGGCTCTTATATATGGGACAACGTCACCATTGAAGATGGCTGTAAACTTAGTCATGCTATCGTCTGTGATGGAGTTATTATAAAGTCAGGGGCAGAACTGGAACCTGGTGTAATTTTGTCTTTCAAGGTTGTTGTAGGGGATCAGTTTATTGTTCCATCATATTCAAAGGTATCTTTGTTTCAGCAGCCAATCAATCAAGATAGCGATGATGAGCTGGAATATGCAGATAATAGCAGTGCTTACATTACTTTGGCATATACAGTTGCAGATACAACGGACAAGTCAAATAATGAACTGATGTCCAAATCGCTTGAAATGCAAGGCTGGCCTGCATCTGAGCTAGGCAATGGAGGTATAGGACATGTTTGGTCAATTTGTGAAGGAAGTGTTGAAGAAGAATGGAGGCACTCAGTTGCACCCATTCCTGCCGATAAACTTGAGAAGACTCTGCAAAAAGCGACAGATGATGAGCTGGAGTTAACTCGAGATGCTAATGTTCTTCCAACTTCAGGAGAGTCGAAGTCTGATTCAAATGTCTCAGATGGTGATGATAACGAAGACTCTAGAGATGACTCCATCCACTTTGAGAAAGAGGTTGAAGCAACGTTTCTGAGAGGTGTGCACGAAAATATTAAAGTAGACAATGTAATTTTGGAAGTGAACTCATTGCGGTTGTCATATAATAAGGTGGCTGCAGATTGTGCAGGAGCATTGTTTTATTCTCTGATGAAATTTGCCTTAGACTCTCCACATGGTTCATCTAGTGAGCTACTGCAAAACACTACAAATATAATTACGAAATGGAAAAAACTTTTGAAGTACTACTTAACTGACATGGATGAAGAGATTGAAGTGATATTAAAATTTGAAGAGATGTGCCTGGAATCGGCCAAGGAATTCACCCCACATTTTACTAAGTGGTTAAGAGTTGCATCAGAAGAGGAAGATGATGAAGAGGAGGAATAG 1764 41.33 MGAQRKGASRVSEDSEELARVSLQAVLLADSFTTKFRPITLERPKVLLPLVNVPMINYALSWLESAGVEEVFVFCCANSKQVIDYLENSEWVSLPDFAVTTIESHNSISAGDALRLIYERNVIHGDFVLITGDTVSNMPLTQALQEHKDRKKKDSNAIMGYKIYTHEICSSYAARIDNYRSYDTVSKDIIQRWTYPLVPDVKFFGNSAYKLERQGMYRASEILQARSAQVGPFTVIGDNSKIGDNTKITNSIIGQGCSIGSNVTIEGSYIWDNVTIEDGCKLSHAIVCDGVIIKSGAELEPGVILSFKVVVGDQFIVPSYSKVSLFQQPINQDSDDELEYADNSSAYITLAYTVADTTDKSNNELMSKSLEMQGWPASELGNGGIGHVWSICEGSVEEEWRHSVAPIPADKLEKTLQKATDDELELTRDANVLPTSGESKSDSNVSDGDDNEDSRDDSIHFEKEVEATFLRGVHENIKVDNVILEVNSLRLSYNKVAADCAGALFYSLMKFALDSPHGSSSELLQNTTNIITKWKKLLKYYLTDMDEEIEVILKFEEMCLESAKEFTPHFTKWLRVASEEEDDEEEE 587
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 8147455 8160331 + Cp4.1LG11g09630.1 Cpe11g00963 477757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe11g00963 587 Gene3D - 448 582 - -
Cpe11g00963 587 CDD W2_eIF2B_epsilon 456 564 IPR044123 GO:0005085|GO:0031369
Cpe11g00963 587 MobiDBLite consensus disorder prediction 443 458 - -
Cpe11g00963 587 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 9 174 IPR029044 -
Cpe11g00963 587 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT EPSILON 156 575 - -
Cpe11g00963 587 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT EPSILON 10 159 - -
Cpe11g00963 587 SUPERFAMILY ARM repeat 461 570 IPR016024 -
Cpe11g00963 587 CDD LbH_eIF2B_epsilon 235 313 - -
Cpe11g00963 587 Gene3D Hexapeptide repeat proteins 213 319 - -
Cpe11g00963 587 Pfam Bacterial transferase hexapeptide (six repeats) 234 267 IPR001451 -
Cpe11g00963 587 Coils Coil 409 429 - -
Cpe11g00963 587 MobiDBLite consensus disorder prediction 421 458 - -
Cpe11g00963 587 Pfam Nucleotidyl transferase 25 160 IPR005835 GO:0009058|GO:0016779
Cpe11g00963 587 ProSiteProfiles W2 domain profile. 455 587 IPR003307 GO:0005515
Cpe11g00963 587 SUPERFAMILY Nucleotide-diphospho-sugar transferases 23 290 IPR029044 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe11g00963 Cpe-Chr11:8147455 Cpe18g00112 Cpe-Chr18:2734390 2.02E-15 dispersed
Cpe11g00963 Cpe-Chr11:8147455 Cpe07g00930 Cpe-Chr7:8332473 1.02E-95 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe11g00963 K03240 - csv:101217025 723.005