Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe11g00973 TACAGAGCATTTGATGAATATGAAGGAATCGAGGTCGCTTGGAATCAAGTGAAACTCTATGATTTCTTGCAAAGTCCTGAAGATTTGGAAAGGCTTTACTGTGAGATTCATCTTTTGAAAACATTGAAACACAGAAATATTATGAAATTCTACACTTCTTGGGTTGATATTGCTAATAGAAACATCAATTTTGTTACTGAAATGTTCACTTCTGGTACTCTTAGACAGTATAGGTTGAAGCATAAGAGAGTTGATATTAGAGCTGTGAAGCATTGGTGCAGGCAGATTTTGAGGGGGCTTCATTATTTGCATAGCCATGAGCCTCCTGTGATCCATAGAGATCTCAAGTGTGATAATATTTTTGTTAATGGGAATCAAGGGGAGGTTAAGATTGGTGATCTTGGACTTGCTGCAATTCTCAGGAAATCTCATGCTGATCATTGT 444 37.16 YRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHRNIMKFYTSWVDIANRNINFVTEMFTSGTLRQYRLKHKRVDIRAVKHWCRQILRGLHYLHSHEPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHADHC 148
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 8243172 8243706 - Cp4.1LG11g09790.1 Cpe11g00973 477767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe11g00973 148 ProSiteProfiles Protein kinase domain profile. 1 148 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe11g00973 148 SMART serkin_6 1 147 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe11g00973 148 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK1 1 148 - -
Cpe11g00973 148 Pfam Protein kinase domain 3 144 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe11g00973 148 Gene3D Phosphorylase Kinase; domain 1 1 67 - -
Cpe11g00973 148 SUPERFAMILY Protein kinase-like (PK-like) 1 143 IPR011009 -
Cpe11g00973 148 Gene3D Transferase(Phosphotransferase) domain 1 69 148 - -
Cpe11g00973 148 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 1 148 - -
Cpe11g00973 148 ProSitePatterns Serine/Threonine protein kinases active-site signature. 110 122 IPR008271 GO:0004672|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe05g00949 Cpe11g00973 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe11g00973 Cpe-Chr11:8243172 Cpe20g00266 Cpe-Chr20:1491133 1.02E-82 dispersed
Cpe11g00973 Cpe-Chr11:8243172 Cpe07g00941 Cpe-Chr7:8423449 1.23E-50 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62722 PF00069 Pkinase 1.40E-28 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe11g00973 K08867 - csv:101219552 313.153