Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe11g00973 | TACAGAGCATTTGATGAATATGAAGGAATCGAGGTCGCTTGGAATCAAGTGAAACTCTATGATTTCTTGCAAAGTCCTGAAGATTTGGAAAGGCTTTACTGTGAGATTCATCTTTTGAAAACATTGAAACACAGAAATATTATGAAATTCTACACTTCTTGGGTTGATATTGCTAATAGAAACATCAATTTTGTTACTGAAATGTTCACTTCTGGTACTCTTAGACAGTATAGGTTGAAGCATAAGAGAGTTGATATTAGAGCTGTGAAGCATTGGTGCAGGCAGATTTTGAGGGGGCTTCATTATTTGCATAGCCATGAGCCTCCTGTGATCCATAGAGATCTCAAGTGTGATAATATTTTTGTTAATGGGAATCAAGGGGAGGTTAAGATTGGTGATCTTGGACTTGCTGCAATTCTCAGGAAATCTCATGCTGATCATTGT | 444 | 37.16 | YRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHRNIMKFYTSWVDIANRNINFVTEMFTSGTLRQYRLKHKRVDIRAVKHWCRQILRGLHYLHSHEPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHADHC | 148 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 8243172 | 8243706 | - | Cp4.1LG11g09790.1 | Cpe11g00973 | 477767 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe11g00973 | 148 | ProSiteProfiles | Protein kinase domain profile. | 1 | 148 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe11g00973 | 148 | SMART | serkin_6 | 1 | 147 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe11g00973 | 148 | PANTHER | SERINE/THREONINE-PROTEIN KINASE WNK1 | 1 | 148 | - | - | |
Cpe11g00973 | 148 | Pfam | Protein kinase domain | 3 | 144 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe11g00973 | 148 | Gene3D | Phosphorylase Kinase; domain 1 | 1 | 67 | - | - | |
Cpe11g00973 | 148 | SUPERFAMILY | Protein kinase-like (PK-like) | 1 | 143 | IPR011009 | - | |
Cpe11g00973 | 148 | Gene3D | Transferase(Phosphotransferase) domain 1 | 69 | 148 | - | - | |
Cpe11g00973 | 148 | PANTHER | SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED | 1 | 148 | - | - | |
Cpe11g00973 | 148 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 110 | 122 | IPR008271 | GO:0004672|GO:0006468 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe05g00949 | Cpe11g00973 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe11g00973 | Cpe-Chr11:8243172 | Cpe20g00266 | Cpe-Chr20:1491133 | 1.02E-82 | dispersed | |
Cpe11g00973 | Cpe-Chr11:8243172 | Cpe07g00941 | Cpe-Chr7:8423449 | 1.23E-50 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
62722 | PF00069 | Pkinase | 1.40E-28 | CL0016 | Cpe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe11g00973 | K08867 | - | csv:101219552 | 313.153 |