Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe11g01082 ATGGCAGCCATAGCCAGAGACGAGTCAGACTACGACAGCAGCTGCTCCTCCATAACACTCCCAGACTCCACCCGTAGCTGGATGAGCAACCTAAGCTTCGGCAGCAGCAGCAGCTCACCCACAGACGCCACTTCTCCAGTACAAAAGCCACACAAAGCCAACGAAGTAGCATGGGAAGCGATGCGGTGGCTCCGGGGAGCAAAAGGGGAGGTGGGGTTGGAGAATTTCCGGCTTCTACGGCGGTTGGGGAGCGGAGACATTGGGAATGTTTATCTCTGCCAGATAAGGAAGCCGACGCCGACGGCGCGTGTCGGGCAGTGCTGCTACGCGATGAAAGTGGTGGACAGAGAAGCGGTGTGTGTGAGGAATAAGGAAAGAAGAGCGGAGATGGAAAAGGAGATCCTGAAAATGATTGATCATCCGTTCTTGCCCACGCTCTATGCCGCGTTTGAAGCTTCGCATTACTCTTGTTTGGTTATGGAGTTTTGTCCCGGCGGTGATTTGTACGCCGCTCGCCTCCGTCAGCCGGCGAAACGATTCTCCATTTCTTCTGCCAAGTTTTATGCGGCGGAGATAATTTTAGCCCTAGAGTATTTGCACATGATGGGCATAGTTTACAGAGATTTGAAGCCGGAAAACGTGCTGGTCAGACACGACGGTCACATAATGCTGTCGGATTTCGATCTCTGTCTCAAATGCGACGTCGTTCCGAAGCTAATCCGTTCCAGAACCACCGCCTCTGACGTCACCGAACGTTACGTCCGATCTTACTCCACGTCATCAACCACCTCCTGCGCCGCCGTCCCAATTAAGCCAGTTCTCTCCTGTTTCTCCATCTCCCGCCGCAGGAAACCCACCACCGTCACGACAATCACCGAACACGTCGACGACGATGGATACAACGAGGAATTCGACACGGAACCGGAATTAGTAGCGGAGCCGATCAATGCTCGATCGAAATCCTTTGTCGGAACCCACGAATATTTGGCGCCGGAGGTTATTTCCGGTCAAGGACACGGCAGCGCAGTGGATTGGTGGACGGTGGGGATTTTCTTATACGAAATGGTGTACGGAAAAACCCCATTTAAAGGGGAAAACAATGAGAAGACATTAATGAACATATTGAGACAGCCATTGAGGTTTCCAAGAATTGGGTTTAGTAGCAGCAAAGAGTATGAAGAAATGGTGAAAGTTGAGGATTTAATCAAGAAGCTTTTGGTGAAGAATCCCAAGAAGAGAATTGGAAGCTTAAAGGGTTCAATTGAAATCAAAAGACATGAATTTTTCAAAGGAGTGAATTGGGCTTTAATCCGCTCGGTTCGACCTCCCCATGTCCCGAATTCCGACCACCTTAATCCCCGCTCCAAAAACCCTAAATTGACCAAACAACAACGACAACAACCCTATCAAATCCCTTCTGACCGTTTCGATTACTTCTGA 1440 50.14 MAAIARDESDYDSSCSSITLPDSTRSWMSNLSFGSSSSSPTDATSPVQKPHKANEVAWEAMRWLRGAKGEVGLENFRLLRRLGSGDIGNVYLCQIRKPTPTARVGQCCYAMKVVDREAVCVRNKERRAEMEKEILKMIDHPFLPTLYAAFEASHYSCLVMEFCPGGDLYAARLRQPAKRFSISSAKFYAAEIILALEYLHMMGIVYRDLKPENVLVRHDGHIMLSDFDLCLKCDVVPKLIRSRTTASDVTERYVRSYSTSSTTSCAAVPIKPVLSCFSISRRRKPTTVTTITEHVDDDGYNEEFDTEPELVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTVGIFLYEMVYGKTPFKGENNEKTLMNILRQPLRFPRIGFSSSKEYEEMVKVEDLIKKLLVKNPKKRIGSLKGSIEIKRHEFFKGVNWALIRSVRPPHVPNSDHLNPRSKNPKLTKQQRQQPYQIPSDRFDYF 479
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 9033317 9036007 + Cp4.1LG11g10800.1 Cpe11g01082 477876
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe11g01082 479 MobiDBLite consensus disorder prediction 31 51 - -
Cpe11g01082 479 MobiDBLite consensus disorder prediction 445 479 - -
Cpe11g01082 479 PANTHER PROTEIN KINASE PINOID 2 1 479 - -
Cpe11g01082 479 MobiDBLite consensus disorder prediction 450 471 - -
Cpe11g01082 479 Pfam Protein kinase domain 319 429 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe11g01082 479 Pfam Protein kinase domain 77 253 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe11g01082 479 PANTHER FLIPPASE KINASE 1-RELATED 1 479 - -
Cpe11g01082 479 ProSiteProfiles Protein kinase domain profile. 76 429 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe11g01082 479 SUPERFAMILY Protein kinase-like (PK-like) 56 457 IPR011009 -
Cpe11g01082 479 Gene3D Transferase(Phosphotransferase) domain 1 317 447 - -
Cpe11g01082 479 CDD STKc_phototropin_like 76 446 - -
Cpe11g01082 479 SMART serkin_6 76 429 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe11g01082 479 Gene3D Transferase(Phosphotransferase) domain 1 163 232 - -
Cpe11g01082 479 Gene3D Phosphorylase Kinase; domain 1 74 162 - -
Cpe11g01082 479 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
Cpe11g01082 479 MobiDBLite consensus disorder prediction 31 48 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g00575 Cpe-Chr1:3331191 Cpe11g01082 Cpe-Chr11:9033317 4.37E-117 dispersed
Cpe11g01082 Cpe-Chr11:9033317 Cpe04g00529 Cpe-Chr4:5753669 3.46E-142 dispersed
Cpe09g00738 Cpe-Chr9:6818279 Cpe11g01082 Cpe-Chr11:9033317 7.00E-143 transposed
Cpe11g01082 Cpe-Chr11:9033317 Cpe07g01089 Cpe-Chr7:9630990 2.23E-75 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62726 PF00069 Pkinase 1.10E-32 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe11g01082 K08286 - csv:101202905 741.11