Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe11g01088 ATGGTGGCCTGGATTTTGTGTTCCTGCTTGTTTCTACTGCTTTTAAGGGCGGCGGTGGTTCTGTGGTGGCGGCCGAGGAAAATAGAACACCATTTCTGCCGCCAAGGAATCAGAGGCCCTCCCTACCGTTTCTTCATCGGAAATGTTAAGGAAATTGTCGGAATGATGATTAAAGCTTCCTCCGATCATTCTTTTCCTAATTCTTCTCATAATATTCTTCCTCGTGTTCTTCCTTTCTATCATCACTGGAAGAAGATTTACGGGTCAAAATTTCTAGTGTGGTTCGGGCCAACGGTGAGATTGGCAGTGTCTGATCCAGACCTGATTCGAGAAATCTTCACATCAAAATCAGAATTGTGCGAGAAAAACGAACCTCACCCACTCTTGTTGATTCCAGTGATGGCAAAAAGTGTTGTGGAAATGTTGGAGAAATGGTCGGCAATGTCAGCAGATTCCGGCGAGGTGGAAATTGAAGTGTCGGAATGGTTCCAAACCCTAACGGAAGATGTCATCACTAGAACCGCCTTTGGCTCAAGCTATGAAGATGGAAAAGCCATTTTTCGCTTACAAGCTCAACAAATGATCCTTGCTTCTCAAGCCTTTGACAAAGTTTACATCCCTGGTTACAGATTCTTACCCACGAGAACGAACGTGAATTCGTGGCGATTGGATAGAGAAATAAGAAAATCGTTGATGAAATTGATCGATCGACGACACGAGAATTCGATCGAGTCGAGCTCGAAGGATTTATTAGGGTTGATGATTCGAGCATCCAAGTCTTCTCCTTCATCTACAATCACTGTTAATGACATTGTTGAAGAGTGCAAGGGGTTTTTCTTTGCTGGCAAACAGACCACATCTAATTTGCTGACGTGGACAATGATCCTCATGGCAATGCACCCACAATGGCAGATACAGGCACGTGATGAGGTACTAAGGGTGTGTGGGGCACGTGACGTACCCTCCAAAGATGATGTTACAAAGCTCAAAACGTTGAGTATGATTATCAACGAATCCTTACGGTTATATCCACCGACAGTGGCAACTATTCGACAAGCGAAAGCTGATGTGGAGTTTGGTGGTTACATGATTCCACGTGGCACTGAGCTATTGATTCCAATTTTGGCTGTTCATCATGATCAAACGATATGGGGCAATGATGTGAACGAGTTCAATCCAGGACGGTTTGCAGAAGGTGTGGCAAAGGCAGCCAATCATCGGGTTGGATTCATTCCATTTGGGCTTGGAGCTCGGACATGTATAGGCCAAAACTTGGCTCTATTGCAAGCAAAATTAGCTCTCGCACTCATTCTTCAAAAGTTCTCTTTTCGATTGGGTCCCTCTTATCAACACTCACCAGCAGTTCAGATGTTACTTTATCCACGATATGGTGCACCTATTATCTTCCAGAAGTTATCCACTTCATTGCTCCATCAAGATCAACGGTCATGA 1452 44.35 MVAWILCSCLFLLLLRAAVVLWWRPRKIEHHFCRQGIRGPPYRFFIGNVKEIVGMMIKASSDHSFPNSSHNILPRVLPFYHHWKKIYGSKFLVWFGPTVRLAVSDPDLIREIFTSKSELCEKNEPHPLLLIPVMAKSVVEMLEKWSAMSADSGEVEIEVSEWFQTLTEDVITRTAFGSSYEDGKAIFRLQAQQMILASQAFDKVYIPGYRFLPTRTNVNSWRLDREIRKSLMKLIDRRHENSIESSSKDLLGLMIRASKSSPSSTITVNDIVEECKGFFFAGKQTTSNLLTWTMILMAMHPQWQIQARDEVLRVCGARDVPSKDDVTKLKTLSMIINESLRLYPPTVATIRQAKADVEFGGYMIPRGTELLIPILAVHHDQTIWGNDVNEFNPGRFAEGVAKAANHRVGFIPFGLGARTCIGQNLALLQAKLALALILQKFSFRLGPSYQHSPAVQMLLYPRYGAPIIFQKLSTSLLHQDQRS 483
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 9067283 9070341 - Cp4.1LG11g10900.1 Cpe11g01088 477882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe11g01088 483 PRINTS P450 superfamily signature 411 420 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe11g01088 483 PRINTS P450 superfamily signature 334 345 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe11g01088 483 PRINTS P450 superfamily signature 281 298 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe11g01088 483 PRINTS P450 superfamily signature 420 431 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe11g01088 483 PANTHER CYTOCHROMEA2 129 467 - -
Cpe11g01088 483 Gene3D Cytochrome P450 22 475 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe11g01088 483 Pfam Cytochrome P450 131 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe11g01088 483 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 413 422 IPR017972 GO:0005506|GO:0016705
Cpe11g01088 483 PANTHER CYTOCHROME P450 FAMILY MEMBER 129 467 - -
Cpe11g01088 483 PANTHER CYTOCHROME P450 FAMILY MEMBER 9 129 - -
Cpe11g01088 483 SUPERFAMILY Cytochrome P450 71 470 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe11g01088 483 PRINTS E-class P450 group IV signature 404 420 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe11g01088 483 PRINTS E-class P450 group IV signature 329 345 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe11g01088 483 PRINTS E-class P450 group IV signature 272 298 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe11g01088 483 PRINTS E-class P450 group IV signature 420 438 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe11g01088 483 PANTHER CYTOCHROMEA2 9 129 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe11g01088 Cpe18g00469 CCT
Cpe07g01083 Cpe11g01088 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe09g00232 Cpe-Chr9:1328125 Cpe11g01088 Cpe-Chr11:9067283 2.89E-12 dispersed
Cpe11g01088 Cpe-Chr11:9067283 Cpe13g01023 Cpe-Chr13:8427343 1.36E-80 dispersed
Cpe18g00330 Cpe-Chr18:4774199 Cpe11g01088 Cpe-Chr11:9067283 1.34E-36 dispersed
Cpe11g01088 Cpe-Chr11:9067283 Cpe18g00469 Cpe-Chr18:5635774 1.43E-127 wgd
Cpe11g01088 Cpe-Chr11:9067283 Cpe04g01172 Cpe-Chr4:9983851 2.84E-124 wgd
Cpe11g01088 Cpe-Chr11:9067283 Cpe07g01083 Cpe-Chr7:9593696 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe11g01088 K15639 - csv:101208789 862.833