Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe11g01106 ATGAATTTACGAAGGAAGGAAGGAAGGAAGGAAGGAAGAAAGCTGAAGAAAGTGGGAATTTGTGGAATCAGATGTCTCTCATATGAGATGAAGACCCATTCCCATTTCAACATTCATCTTTTCTTCCAAATTTTCCTCTTCTTCGGCACTCTTTTCTGCCTCTCCTCTGCTGTTTCTGACGACCTTCTTCAACTTTCCGGCCATGGCGGCCGAGGCCGCGGCCTCACCGACGCCGAAGCTCACTACATCCGTCAGCGCCAACTTCTTTCCGTCAGAGACGAATTCGGCGACCGTGGTGAAGAAGTCACCGTCGATCCCAAGCTTGTTTTTGAAAACGACAGAATCAGAAATGCTTACATAGCGTTACAAGCTTGGAAGCAAGCGATTCTCTCTGATCCTTTCAATCTCACTCAGAATTGGGTTGGATCTGATGTTTGTAGCTACAATGGGGTTTTCTGTGCTCCGGCGCCGGATAATTCCTCGATCCGTACGGTCGCCGGTATCGACCTCAACCATGGCGACATTGCCGGTTACTTACCGGAGGAGCTTGGTCTTCTTGTGGATCTTGCATTGTTCCATGTAAACTCGAATCGCTTCTGTGGGACTGTTCCTCACAAGTTCAAGAACTTGAAGCGGTTGTTTGAGTTGGATCTGAGCAACAATCGCTTCGCCGGAAAGTTCCCTCGGGTGGTTCTTAAGCTGCCGGAGCTGAAGTTTTTGGATCTGAGATTTAATGAGTTTGAAGGAACTGTCCCCAAGGAGCTTTTCGACAAGGATTTGGACGCCATTTTCATCAACCATAACAGATTCCGGTTTGACTTGCCGGAAAATTTCGGGAACTCGCCGGTTTCGGTTATTGTTCTTGCGAATAACAAATTTCATGGGTGTGTTCCGGGGAGCATTGGGAATATGACGAGATTGAATGAGATTATTTTGATGAATAATGGGTTTCGATCGTGTTTGCCGTCGGAGATTGGGTTTCTGAAGAATCTGACGGTGTTTGATGTGAGTTTTAATGAGTTTTTTGGGAGTTTGCCGGAGACGATCGGCGGAATGGTGAGTTTAGAGCAGCTGAATGTGGCGCATAATTTCTTGTCTGGGAAGATTCCGGAGAGTATCTGTAAATTGCCGAATCTGCAGAACTTTACTTACTCTTACAATTTCTTTACGGGAGAGGCGCCGTCGTGCTTGGCTTTGCCGGATTTTGATGACCGGAGGAACTGTCTACCTGACCGGCCGGTACAGCGGTCTGAGAGGCAATGTAAGTCGTTCTTGTCTAAGCCTGTGGATTGCAGTTCTTTTGGATGTCCTTCTTATGTTGCTCCCTCGCCACCTGTAACGGTGCCTTCTCCGCCACCTGTTGTTGTTCCGTCGCCGTCGCCACCTGTTGTTGTTCCGTCGCCGTCGCCACCTGTTCCCACTCCTTCGCCACCTACTTCCGAATCACATCCCATTTACCGACCACGCCCTCCGCCACCTCCATCCCCCTCTCCCCCTCCGCCGCCTCCTCCTCCACCTCCACCGCCACCATGTATTGAGTATCATGAACCCCCACCCCCACCATCACCCTCACCACCTCCGCCAATCCAATACCTTCCTCCGCCATCTCCTTCACCCCCACCACCACCACCTCCCACCCCAGTTTACCATTCACCTCCACCGCCAGTCTATTACTCTCCCCCACCACCACCATCACCATCTCCACCTCCACCACCTGCATCACCACCACCATCACCTGTATACGAAGGCCCACTACCACCAATCTATGGAGTTTCGTACGCCTCTCCCCCACCTCCACCCTACTATTGA 1809 50.69 MNLRRKEGRKEGRKLKKVGICGIRCLSYEMKTHSHFNIHLFFQIFLFFGTLFCLSSAVSDDLLQLSGHGGRGRGLTDAEAHYIRQRQLLSVRDEFGDRGEEVTVDPKLVFENDRIRNAYIALQAWKQAILSDPFNLTQNWVGSDVCSYNGVFCAPAPDNSSIRTVAGIDLNHGDIAGYLPEELGLLVDLALFHVNSNRFCGTVPHKFKNLKRLFELDLSNNRFAGKFPRVVLKLPELKFLDLRFNEFEGTVPKELFDKDLDAIFINHNRFRFDLPENFGNSPVSVIVLANNKFHGCVPGSIGNMTRLNEIILMNNGFRSCLPSEIGFLKNLTVFDVSFNEFFGSLPETIGGMVSLEQLNVAHNFLSGKIPESICKLPNLQNFTYSYNFFTGEAPSCLALPDFDDRRNCLPDRPVQRSERQCKSFLSKPVDCSSFGCPSYVAPSPPVTVPSPPPVVVPSPSPPVVVPSPSPPVPTPSPPTSESHPIYRPRPPPPPSPSPPPPPPPPPPPPPCIEYHEPPPPPSPSPPPPIQYLPPPSPSPPPPPPPTPVYHSPPPPVYYSPPPPPSPSPPPPPASPPPSPVYEGPLPPIYGVSYASPPPPPYY 602
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 9219685 9222780 - Cp4.1LG11g11120.1 Cpe11g01106 477900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe11g01106 602 Pfam Leucine rich repeat 192 246 IPR001611 GO:0005515
Cpe11g01106 602 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 46 488 - -
Cpe11g01106 602 MobiDBLite consensus disorder prediction 455 546 - -
Cpe11g01106 602 MobiDBLite consensus disorder prediction 560 602 - -
Cpe11g01106 602 Gene3D Ribonuclease Inhibitor 280 421 IPR032675 -
Cpe11g01106 602 PRINTS Proline rich extensin signature 437 453 - -
Cpe11g01106 602 PRINTS Proline rich extensin signature 459 471 - -
Cpe11g01106 602 PRINTS Proline rich extensin signature 473 494 - -
Cpe11g01106 602 PRINTS Proline rich extensin signature 494 510 - -
Cpe11g01106 602 SUPERFAMILY L domain-like 119 399 - -
Cpe11g01106 602 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 5 46 488 - -
Cpe11g01106 602 Pfam Leucine rich repeat N-terminal domain 121 153 IPR013210 -
Cpe11g01106 602 Pfam Leucine Rich Repeat 354 376 IPR001611 GO:0005515
Cpe11g01106 602 Gene3D Ribonuclease Inhibitor 119 279 IPR032675 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe11g01106 Cpe18g00446 CCT
Cpe07g00999 Cpe11g01106 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g01458 Cpe-Chr3:11620680 Cpe11g01106 Cpe-Chr11:9219685 1.07E-147 dispersed
Cpe08g00278 Cpe-Chr8:1792592 Cpe11g01106 Cpe-Chr11:9219685 2.97E-150 dispersed
Cpe11g01106 Cpe-Chr11:9219685 Cpe17g00367 Cpe-Chr17:2640891 2.65E-120 dispersed
Cpe04g00813 Cpe-Chr4:7646840 Cpe11g01106 Cpe-Chr11:9219685 2.91E-132 transposed
Cpe11g01106 Cpe-Chr11:9219685 Cpe18g00446 Cpe-Chr18:5474595 0 wgd
Cpe11g01106 Cpe-Chr11:9219685 Cpe07g00999 Cpe-Chr7:9122216 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe11g01106 - - cmax:111493802 813.913