Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe11g01119 ATGGCCGCAGATTTTGAGGTCTTATTTTGGATGATGAGCGCTTCCAAGTTCATTAAATGCGTCACTGTTGGAGATGGAGCTGTTGGGAAGACCTGTATGCTTATTTGTTACACCAGCAATAAGTTCCCCACTGATTACATTCCCACAGTGTTTGACAATTTCAGTGCCAATGTGTCTGTGGATGGGAACATTGTGAATTTGGGGTTATGGGACACCGCAGGTCAGGAAGATTATAGCAGGCTAAGGCCTTTGAGTTACAGAGGTGCAGATGTGTTTGTTCTAGCTTTCTCATTAATTAGTAGAGCCAGCTATGAAAATATCCTCAAGAAGTGGATGCCTGAACTGCGAAGATTTGCACCCAACGTCCCGATCATTCTAGTTGGAATGAAGCTCGATCTCCGTGAGGACCGACGATATGCTAACGAACAAACAGGGTATGATATCATTACATCTTCTCAGGGTGAGGAGCTGAGAAAACAAATTGGTGCTTCAGCTTACATTGAGTGCAGTTCTAAGACACAGCAGCTGTATTTGATACAGCCATTAAAGTTGTTCTGCAACCTCCAAGGAGAAGGGAACTCCCAAAGAAGAAAACACGCCGAGGATCAGGCTGCTCGTTCACAACGCACACTCCAAAATCGTTCGCAAATGGAATCTCCACCGGCCAAGAGCTGGAGCATCCACACTCGGCCGGATATCATCCAGAAGTACCAGATCCTCGAGCGAGTCGGATCCGGTGCTTATTCCGATGTTCACCGTGCGCGACGGCTCTCCGACGGCGTCATCGTCGCTTTGAAGGAGATCCACGATTATCAATCGGCGTTCCGCGAAATCGAGGCGCTTCAAATCCTTCAAGGTTCGCCTAATATCGTCGTTCTGCACGAGTACTTTTGGCGCGAAGATGAAGATGCCGTGCTTGTTCTCGAGTTTATGAGAACGGATTTGGCCACCGTTATAGCGGAGGCGAAGAAGCGAGGATCGGACGGGGTAGAATCCGGGCGTGGACTAGCGGTCGGGGAGGTGAAACGGTGGATGATCCAGATTTTGAGTGGCCTTGATGCTTGTCATAGGAATATGATCGTGCATAGGGACTTGAAACCTAGCAATTTGTTGATATCCGATGATGGCGTGCTCAAGCTTGCCGATTTTGGACAGGCAAGAATACTCATGGCGCCTGAATATGTTGAACCAAATGGGATCTCTCAACCATGTGAGATGAACTCTTCAGATCAAGTACCTGCTTCTCAGCCCTCTGCAATTTTTCCTGGAACGGAAAGCTCGGTTCGAGAAGGTAACGGAACCGAAGAGCAAGAACCAATTGGCAAGGAGGAATATCTTAGCGATTTAGGCGAGCTGAAAGCAAAAAATTCAGCAAATGAATTTGACAAGGAAACATATACTTATGATGGAGATACATCTTGCTTAGCAACATGTACCACGAGTGACCTTGAAGATGATCCATTTAAAGGTTCATCATATTCTTATGAAATTGAAGGAGGAGTTCCAGCAGATGATGGTCAAGGTTCGCTCACTTCATGTGTCGGTACTCGCTGGTTCAGGGCCCCCGAATTACTCTATGGCTCAACGAGCTACGGTTTGGCGATCGACTTATGGTCGTTGGGCTGCATTTTTGCTGAACTTTTTACATTGGAACCTCTTTTTCCAGGAACTGCTGACATTGATCAAATGAGCAAAATTTTCACTACTCTTGGCAACTTGACTGAAGATTCCTGGCCAGGTTGTTCTGAACTTCCTGATTTCCATATTATATCATTCAACACAATAGAAAAGCCAATCGGTTTAGAAGCATGTCTTCCCAACTGCTCTCCTGATGAAATTTTTATCGTTAAAAGACTGCTTCGTTATGACCCGGCTAACCGAGCGACTGCCATGGAATTGCTCCAAGATAAGTATTTCACTGAGGATCCATTCCCAGTTCCGTTGGCTGAGCTTCGTGTTCCTTTGACCAGAAGTGGACAGGATGAGGATTCTCCTGCTGGATGGTACGATTACGATGAGTCCGATTCCGATATGGATGAACTCGGCCCCATGAACGTTACCACCAGTGCCACTGGTTACTCGATACAATTTGATTGA 2097 46.4 MAADFEVLFWMMSASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVSVDGNIVNLGLWDTAGQEDYSRLRPLSYRGADVFVLAFSLISRASYENILKKWMPELRRFAPNVPIILVGMKLDLREDRRYANEQTGYDIITSSQGEELRKQIGASAYIECSSKTQQLYLIQPLKLFCNLQGEGNSQRRKHAEDQAARSQRTLQNRSQMESPPAKSWSIHTRPDIIQKYQILERVGSGAYSDVHRARRLSDGVIVALKEIHDYQSAFREIEALQILQGSPNIVVLHEYFWREDEDAVLVLEFMRTDLATVIAEAKKRGSDGVESGRGLAVGEVKRWMIQILSGLDACHRNMIVHRDLKPSNLLISDDGVLKLADFGQARILMAPEYVEPNGISQPCEMNSSDQVPASQPSAIFPGTESSVREGNGTEEQEPIGKEEYLSDLGELKAKNSANEFDKETYTYDGDTSCLATCTTSDLEDDPFKGSSYSYEIEGGVPADDGQGSLTSCVGTRWFRAPELLYGSTSYGLAIDLWSLGCIFAELFTLEPLFPGTADIDQMSKIFTTLGNLTEDSWPGCSELPDFHIISFNTIEKPIGLEACLPNCSPDEIFIVKRLLRYDPANRATAMELLQDKYFTEDPFPVPLAELRVPLTRSGQDEDSPAGWYDYDESDSDMDELGPMNVTTSATGYSIQFD 698
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 9305654 9313910 - Cp4.1LG11g11140.1 Cpe11g01119 477913
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe11g01119 698 Pfam Protein kinase domain 237 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe11g01119 698 Pfam Protein kinase domain 507 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe11g01119 698 ProSiteProfiles small GTPase Ras family profile. 13 263 IPR001806 GO:0003924|GO:0005525
Cpe11g01119 698 PRINTS Transforming protein P21 ras signature 58 80 - -
Cpe11g01119 698 PRINTS Transforming protein P21 ras signature 41 57 - -
Cpe11g01119 698 PRINTS Transforming protein P21 ras signature 18 39 - -
Cpe11g01119 698 PRINTS Transforming protein P21 ras signature 120 133 - -
Cpe11g01119 698 SMART ras_sub_4 15 185 - -
Cpe11g01119 698 ProSitePatterns Protein kinases ATP-binding region signature. 243 266 IPR017441 GO:0005524
Cpe11g01119 698 Pfam Ras family 19 175 IPR001806 GO:0003924|GO:0005525
Cpe11g01119 698 CDD Rop_like 17 175 - -
Cpe11g01119 698 SMART ran_sub_2 23 227 - -
Cpe11g01119 698 Gene3D Phosphorylase Kinase; domain 1 229 327 - -
Cpe11g01119 698 ProSitePatterns Serine/Threonine protein kinases active-site signature. 360 372 IPR008271 GO:0004672|GO:0006468
Cpe11g01119 698 TIGRFAM small_GTP: small GTP-binding protein domain 17 139 IPR005225 GO:0005525
Cpe11g01119 698 ProSiteProfiles small GTPase Rho family profile. 11 208 - -
Cpe11g01119 698 MobiDBLite consensus disorder prediction 195 225 - -
Cpe11g01119 698 PANTHER RHO FAMILY GTPASE 12 175 IPR003578 GO:0005525|GO:0007264
Cpe11g01119 698 PANTHER RAC-LIKE GTP-BINDING PROTEIN ARAC7 12 175 - -
Cpe11g01119 698 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 17 175 IPR027417 -
Cpe11g01119 698 SUPERFAMILY Protein kinase-like (PK-like) 213 646 IPR011009 -
Cpe11g01119 698 Gene3D - 10 180 IPR027417 -
Cpe11g01119 698 Gene3D Transferase(Phosphotransferase) domain 1 330 644 - -
Cpe11g01119 698 MobiDBLite consensus disorder prediction 655 687 - -
Cpe11g01119 698 SMART rab_sub_5 18 179 - -
Cpe11g01119 698 MobiDBLite consensus disorder prediction 206 223 - -
Cpe11g01119 698 SMART rho_sub_3 20 181 IPR001806 GO:0003924|GO:0005525
Cpe11g01119 698 ProSiteProfiles Protein kinase domain profile. 237 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe11g01119 698 ProSiteProfiles small GTPase Rab1 family profile. 13 228 - -
Cpe11g01119 698 SMART serkin_6 237 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe04g01119 Cpe11g01119 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe07g01020 Cpe-Chr7:9232528 Cpe11g01119 Cpe-Chr11:9305654 2.26E-16 dispersed
Cpe11g01119 Cpe-Chr11:9305654 Cpe04g01544 Cpe-Chr4:12102510 1.41E-90 dispersed
Cpe11g01119 Cpe-Chr11:9305654 Cpe04g01119 Cpe-Chr4:9684438 5.73E-98 wgd
Cpe11g01119 Cpe-Chr11:9305654 Cpe07g01019 Cpe-Chr7:9229369 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62728 PF00069 Pkinase 1.50E-31 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe11g01119 - - csv:101209606 855.899