Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe11g01119 | ATGGCCGCAGATTTTGAGGTCTTATTTTGGATGATGAGCGCTTCCAAGTTCATTAAATGCGTCACTGTTGGAGATGGAGCTGTTGGGAAGACCTGTATGCTTATTTGTTACACCAGCAATAAGTTCCCCACTGATTACATTCCCACAGTGTTTGACAATTTCAGTGCCAATGTGTCTGTGGATGGGAACATTGTGAATTTGGGGTTATGGGACACCGCAGGTCAGGAAGATTATAGCAGGCTAAGGCCTTTGAGTTACAGAGGTGCAGATGTGTTTGTTCTAGCTTTCTCATTAATTAGTAGAGCCAGCTATGAAAATATCCTCAAGAAGTGGATGCCTGAACTGCGAAGATTTGCACCCAACGTCCCGATCATTCTAGTTGGAATGAAGCTCGATCTCCGTGAGGACCGACGATATGCTAACGAACAAACAGGGTATGATATCATTACATCTTCTCAGGGTGAGGAGCTGAGAAAACAAATTGGTGCTTCAGCTTACATTGAGTGCAGTTCTAAGACACAGCAGCTGTATTTGATACAGCCATTAAAGTTGTTCTGCAACCTCCAAGGAGAAGGGAACTCCCAAAGAAGAAAACACGCCGAGGATCAGGCTGCTCGTTCACAACGCACACTCCAAAATCGTTCGCAAATGGAATCTCCACCGGCCAAGAGCTGGAGCATCCACACTCGGCCGGATATCATCCAGAAGTACCAGATCCTCGAGCGAGTCGGATCCGGTGCTTATTCCGATGTTCACCGTGCGCGACGGCTCTCCGACGGCGTCATCGTCGCTTTGAAGGAGATCCACGATTATCAATCGGCGTTCCGCGAAATCGAGGCGCTTCAAATCCTTCAAGGTTCGCCTAATATCGTCGTTCTGCACGAGTACTTTTGGCGCGAAGATGAAGATGCCGTGCTTGTTCTCGAGTTTATGAGAACGGATTTGGCCACCGTTATAGCGGAGGCGAAGAAGCGAGGATCGGACGGGGTAGAATCCGGGCGTGGACTAGCGGTCGGGGAGGTGAAACGGTGGATGATCCAGATTTTGAGTGGCCTTGATGCTTGTCATAGGAATATGATCGTGCATAGGGACTTGAAACCTAGCAATTTGTTGATATCCGATGATGGCGTGCTCAAGCTTGCCGATTTTGGACAGGCAAGAATACTCATGGCGCCTGAATATGTTGAACCAAATGGGATCTCTCAACCATGTGAGATGAACTCTTCAGATCAAGTACCTGCTTCTCAGCCCTCTGCAATTTTTCCTGGAACGGAAAGCTCGGTTCGAGAAGGTAACGGAACCGAAGAGCAAGAACCAATTGGCAAGGAGGAATATCTTAGCGATTTAGGCGAGCTGAAAGCAAAAAATTCAGCAAATGAATTTGACAAGGAAACATATACTTATGATGGAGATACATCTTGCTTAGCAACATGTACCACGAGTGACCTTGAAGATGATCCATTTAAAGGTTCATCATATTCTTATGAAATTGAAGGAGGAGTTCCAGCAGATGATGGTCAAGGTTCGCTCACTTCATGTGTCGGTACTCGCTGGTTCAGGGCCCCCGAATTACTCTATGGCTCAACGAGCTACGGTTTGGCGATCGACTTATGGTCGTTGGGCTGCATTTTTGCTGAACTTTTTACATTGGAACCTCTTTTTCCAGGAACTGCTGACATTGATCAAATGAGCAAAATTTTCACTACTCTTGGCAACTTGACTGAAGATTCCTGGCCAGGTTGTTCTGAACTTCCTGATTTCCATATTATATCATTCAACACAATAGAAAAGCCAATCGGTTTAGAAGCATGTCTTCCCAACTGCTCTCCTGATGAAATTTTTATCGTTAAAAGACTGCTTCGTTATGACCCGGCTAACCGAGCGACTGCCATGGAATTGCTCCAAGATAAGTATTTCACTGAGGATCCATTCCCAGTTCCGTTGGCTGAGCTTCGTGTTCCTTTGACCAGAAGTGGACAGGATGAGGATTCTCCTGCTGGATGGTACGATTACGATGAGTCCGATTCCGATATGGATGAACTCGGCCCCATGAACGTTACCACCAGTGCCACTGGTTACTCGATACAATTTGATTGA | 2097 | 46.4 | MAADFEVLFWMMSASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVSVDGNIVNLGLWDTAGQEDYSRLRPLSYRGADVFVLAFSLISRASYENILKKWMPELRRFAPNVPIILVGMKLDLREDRRYANEQTGYDIITSSQGEELRKQIGASAYIECSSKTQQLYLIQPLKLFCNLQGEGNSQRRKHAEDQAARSQRTLQNRSQMESPPAKSWSIHTRPDIIQKYQILERVGSGAYSDVHRARRLSDGVIVALKEIHDYQSAFREIEALQILQGSPNIVVLHEYFWREDEDAVLVLEFMRTDLATVIAEAKKRGSDGVESGRGLAVGEVKRWMIQILSGLDACHRNMIVHRDLKPSNLLISDDGVLKLADFGQARILMAPEYVEPNGISQPCEMNSSDQVPASQPSAIFPGTESSVREGNGTEEQEPIGKEEYLSDLGELKAKNSANEFDKETYTYDGDTSCLATCTTSDLEDDPFKGSSYSYEIEGGVPADDGQGSLTSCVGTRWFRAPELLYGSTSYGLAIDLWSLGCIFAELFTLEPLFPGTADIDQMSKIFTTLGNLTEDSWPGCSELPDFHIISFNTIEKPIGLEACLPNCSPDEIFIVKRLLRYDPANRATAMELLQDKYFTEDPFPVPLAELRVPLTRSGQDEDSPAGWYDYDESDSDMDELGPMNVTTSATGYSIQFD | 698 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 9305654 | 9313910 | - | Cp4.1LG11g11140.1 | Cpe11g01119 | 477913 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe11g01119 | 698 | Pfam | Protein kinase domain | 237 | 392 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe11g01119 | 698 | Pfam | Protein kinase domain | 507 | 639 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe11g01119 | 698 | ProSiteProfiles | small GTPase Ras family profile. | 13 | 263 | IPR001806 | GO:0003924|GO:0005525 | |
Cpe11g01119 | 698 | PRINTS | Transforming protein P21 ras signature | 58 | 80 | - | - | |
Cpe11g01119 | 698 | PRINTS | Transforming protein P21 ras signature | 41 | 57 | - | - | |
Cpe11g01119 | 698 | PRINTS | Transforming protein P21 ras signature | 18 | 39 | - | - | |
Cpe11g01119 | 698 | PRINTS | Transforming protein P21 ras signature | 120 | 133 | - | - | |
Cpe11g01119 | 698 | SMART | ras_sub_4 | 15 | 185 | - | - | |
Cpe11g01119 | 698 | ProSitePatterns | Protein kinases ATP-binding region signature. | 243 | 266 | IPR017441 | GO:0005524 | |
Cpe11g01119 | 698 | Pfam | Ras family | 19 | 175 | IPR001806 | GO:0003924|GO:0005525 | |
Cpe11g01119 | 698 | CDD | Rop_like | 17 | 175 | - | - | |
Cpe11g01119 | 698 | SMART | ran_sub_2 | 23 | 227 | - | - | |
Cpe11g01119 | 698 | Gene3D | Phosphorylase Kinase; domain 1 | 229 | 327 | - | - | |
Cpe11g01119 | 698 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 360 | 372 | IPR008271 | GO:0004672|GO:0006468 | |
Cpe11g01119 | 698 | TIGRFAM | small_GTP: small GTP-binding protein domain | 17 | 139 | IPR005225 | GO:0005525 | |
Cpe11g01119 | 698 | ProSiteProfiles | small GTPase Rho family profile. | 11 | 208 | - | - | |
Cpe11g01119 | 698 | MobiDBLite | consensus disorder prediction | 195 | 225 | - | - | |
Cpe11g01119 | 698 | PANTHER | RHO FAMILY GTPASE | 12 | 175 | IPR003578 | GO:0005525|GO:0007264 | |
Cpe11g01119 | 698 | PANTHER | RAC-LIKE GTP-BINDING PROTEIN ARAC7 | 12 | 175 | - | - | |
Cpe11g01119 | 698 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 17 | 175 | IPR027417 | - | |
Cpe11g01119 | 698 | SUPERFAMILY | Protein kinase-like (PK-like) | 213 | 646 | IPR011009 | - | |
Cpe11g01119 | 698 | Gene3D | - | 10 | 180 | IPR027417 | - | |
Cpe11g01119 | 698 | Gene3D | Transferase(Phosphotransferase) domain 1 | 330 | 644 | - | - | |
Cpe11g01119 | 698 | MobiDBLite | consensus disorder prediction | 655 | 687 | - | - | |
Cpe11g01119 | 698 | SMART | rab_sub_5 | 18 | 179 | - | - | |
Cpe11g01119 | 698 | MobiDBLite | consensus disorder prediction | 206 | 223 | - | - | |
Cpe11g01119 | 698 | SMART | rho_sub_3 | 20 | 181 | IPR001806 | GO:0003924|GO:0005525 | |
Cpe11g01119 | 698 | ProSiteProfiles | Protein kinase domain profile. | 237 | 639 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe11g01119 | 698 | ProSiteProfiles | small GTPase Rab1 family profile. | 13 | 228 | - | - | |
Cpe11g01119 | 698 | SMART | serkin_6 | 237 | 639 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe04g01119 | Cpe11g01119 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe07g01020 | Cpe-Chr7:9232528 | Cpe11g01119 | Cpe-Chr11:9305654 | 2.26E-16 | dispersed | |
Cpe11g01119 | Cpe-Chr11:9305654 | Cpe04g01544 | Cpe-Chr4:12102510 | 1.41E-90 | dispersed | |
Cpe11g01119 | Cpe-Chr11:9305654 | Cpe04g01119 | Cpe-Chr4:9684438 | 5.73E-98 | wgd | |
Cpe11g01119 | Cpe-Chr11:9305654 | Cpe07g01019 | Cpe-Chr7:9229369 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
62728 | PF00069 | Pkinase | 1.50E-31 | CL0016 | Cpe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe11g01119 | - | - | csv:101209606 | 855.899 |