Cucurbitales platform

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cpe11g01119	ATGGCCGCAGATTTTGAGGTCTTATTTTGGATGATGAGCGCTTCCAAGTTCATTAAATGCGTCACTGTTGGAGATGGAGCTGTTGGGAAGACCTGTATGCTTATTTGTTACACCAGCAATAAGTTCCCCACTGATTACATTCCCACAGTGTTTGACAATTTCAGTGCCAATGTGTCTGTGGATGGGAACATTGTGAATTTGGGGTTATGGGACACCGCAGGTCAGGAAGATTATAGCAGGCTAAGGCCTTTGAGTTACAGAGGTGCAGATGTGTTTGTTCTAGCTTTCTCATTAATTAGTAGAGCCAGCTATGAAAATATCCTCAAGAAGTGGATGCCTGAACTGCGAAGATTTGCACCCAACGTCCCGATCATTCTAGTTGGAATGAAGCTCGATCTCCGTGAGGACCGACGATATGCTAACGAACAAACAGGGTATGATATCATTACATCTTCTCAGGGTGAGGAGCTGAGAAAACAAATTGGTGCTTCAGCTTACATTGAGTGCAGTTCTAAGACACAGCAGCTGTATTTGATACAGCCATTAAAGTTGTTCTGCAACCTCCAAGGAGAAGGGAACTCCCAAAGAAGAAAACACGCCGAGGATCAGGCTGCTCGTTCACAACGCACACTCCAAAATCGTTCGCAAATGGAATCTCCACCGGCCAAGAGCTGGAGCATCCACACTCGGCCGGATATCATCCAGAAGTACCAGATCCTCGAGCGAGTCGGATCCGGTGCTTATTCCGATGTTCACCGTGCGCGACGGCTCTCCGACGGCGTCATCGTCGCTTTGAAGGAGATCCACGATTATCAATCGGCGTTCCGCGAAATCGAGGCGCTTCAAATCCTTCAAGGTTCGCCTAATATCGTCGTTCTGCACGAGTACTTTTGGCGCGAAGATGAAGATGCCGTGCTTGTTCTCGAGTTTATGAGAACGGATTTGGCCACCGTTATAGCGGAGGCGAAGAAGCGAGGATCGGACGGGGTAGAATCCGGGCGTGGACTAGCGGTCGGGGAGGTGAAACGGTGGATGATCCAGATTTTGAGTGGCCTTGATGCTTGTCATAGGAATATGATCGTGCATAGGGACTTGAAACCTAGCAATTTGTTGATATCCGATGATGGCGTGCTCAAGCTTGCCGATTTTGGACAGGCAAGAATACTCATGGCGCCTGAATATGTTGAACCAAATGGGATCTCTCAACCATGTGAGATGAACTCTTCAGATCAAGTACCTGCTTCTCAGCCCTCTGCAATTTTTCCTGGAACGGAAAGCTCGGTTCGAGAAGGTAACGGAACCGAAGAGCAAGAACCAATTGGCAAGGAGGAATATCTTAGCGATTTAGGCGAGCTGAAAGCAAAAAATTCAGCAAATGAATTTGACAAGGAAACATATACTTATGATGGAGATACATCTTGCTTAGCAACATGTACCACGAGTGACCTTGAAGATGATCCATTTAAAGGTTCATCATATTCTTATGAAATTGAAGGAGGAGTTCCAGCAGATGATGGTCAAGGTTCGCTCACTTCATGTGTCGGTACTCGCTGGTTCAGGGCCCCCGAATTACTCTATGGCTCAACGAGCTACGGTTTGGCGATCGACTTATGGTCGTTGGGCTGCATTTTTGCTGAACTTTTTACATTGGAACCTCTTTTTCCAGGAACTGCTGACATTGATCAAATGAGCAAAATTTTCACTACTCTTGGCAACTTGACTGAAGATTCCTGGCCAGGTTGTTCTGAACTTCCTGATTTCCATATTATATCATTCAACACAATAGAAAAGCCAATCGGTTTAGAAGCATGTCTTCCCAACTGCTCTCCTGATGAAATTTTTATCGTTAAAAGACTGCTTCGTTATGACCCGGCTAACCGAGCGACTGCCATGGAATTGCTCCAAGATAAGTATTTCACTGAGGATCCATTCCCAGTTCCGTTGGCTGAGCTTCGTGTTCCTTTGACCAGAAGTGGACAGGATGAGGATTCTCCTGCTGGATGGTACGATTACGATGAGTCCGATTCCGATATGGATGAACTCGGCCCCATGAACGTTACCACCAGTGCCACTGGTTACTCGATACAATTTGATTGA	2097	46.4	MAADFEVLFWMMSASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVSVDGNIVNLGLWDTAGQEDYSRLRPLSYRGADVFVLAFSLISRASYENILKKWMPELRRFAPNVPIILVGMKLDLREDRRYANEQTGYDIITSSQGEELRKQIGASAYIECSSKTQQLYLIQPLKLFCNLQGEGNSQRRKHAEDQAARSQRTLQNRSQMESPPAKSWSIHTRPDIIQKYQILERVGSGAYSDVHRARRLSDGVIVALKEIHDYQSAFREIEALQILQGSPNIVVLHEYFWREDEDAVLVLEFMRTDLATVIAEAKKRGSDGVESGRGLAVGEVKRWMIQILSGLDACHRNMIVHRDLKPSNLLISDDGVLKLADFGQARILMAPEYVEPNGISQPCEMNSSDQVPASQPSAIFPGTESSVREGNGTEEQEPIGKEEYLSDLGELKAKNSANEFDKETYTYDGDTSCLATCTTSDLEDDPFKGSSYSYEIEGGVPADDGQGSLTSCVGTRWFRAPELLYGSTSYGLAIDLWSLGCIFAELFTLEPLFPGTADIDQMSKIFTTLGNLTEDSWPGCSELPDFHIISFNTIEKPIGLEACLPNCSPDEIFIVKRLLRYDPANRATAMELLQDKYFTEDPFPVPLAELRVPLTRSGQDEDSPAGWYDYDESDSDMDELGPMNVTTSATGYSIQFD	698

Gff information

Chromosome	Start	End	Strand	Old_gene	Gene	Num
11	9305654	9313910	-	Cp4.1LG11g11140.1	Cpe11g01119	477913

Annotation

Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Cpe11g01119	698	Pfam	Protein kinase domain	237	392	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Cpe11g01119	698	Pfam	Protein kinase domain	507	639	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Cpe11g01119	698	ProSiteProfiles	small GTPase Ras family profile.	13	263	IPR001806	GO:0003924\|GO:0005525
Cpe11g01119	698	PRINTS	Transforming protein P21 ras signature	58	80	-	-
Cpe11g01119	698	PRINTS	Transforming protein P21 ras signature	41	57	-	-
Cpe11g01119	698	PRINTS	Transforming protein P21 ras signature	18	39	-	-
Cpe11g01119	698	PRINTS	Transforming protein P21 ras signature	120	133	-	-
Cpe11g01119	698	SMART	ras_sub_4	15	185	-	-
Cpe11g01119	698	ProSitePatterns	Protein kinases ATP-binding region signature.	243	266	IPR017441	GO:0005524
Cpe11g01119	698	Pfam	Ras family	19	175	IPR001806	GO:0003924\|GO:0005525
Cpe11g01119	698	CDD	Rop_like	17	175	-	-
Cpe11g01119	698	SMART	ran_sub_2	23	227	-	-
Cpe11g01119	698	Gene3D	Phosphorylase Kinase; domain 1	229	327	-	-
Cpe11g01119	698	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	360	372	IPR008271	GO:0004672\|GO:0006468
Cpe11g01119	698	TIGRFAM	small_GTP: small GTP-binding protein domain	17	139	IPR005225	GO:0005525
Cpe11g01119	698	ProSiteProfiles	small GTPase Rho family profile.	11	208	-	-
Cpe11g01119	698	MobiDBLite	consensus disorder prediction	195	225	-	-
Cpe11g01119	698	PANTHER	RHO FAMILY GTPASE	12	175	IPR003578	GO:0005525\|GO:0007264
Cpe11g01119	698	PANTHER	RAC-LIKE GTP-BINDING PROTEIN ARAC7	12	175	-	-
Cpe11g01119	698	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	17	175	IPR027417	-
Cpe11g01119	698	SUPERFAMILY	Protein kinase-like (PK-like)	213	646	IPR011009	-
Cpe11g01119	698	Gene3D	-	10	180	IPR027417	-
Cpe11g01119	698	Gene3D	Transferase(Phosphotransferase) domain 1	330	644	-	-
Cpe11g01119	698	MobiDBLite	consensus disorder prediction	655	687	-	-
Cpe11g01119	698	SMART	rab_sub_5	18	179	-	-
Cpe11g01119	698	MobiDBLite	consensus disorder prediction	206	223	-	-
Cpe11g01119	698	SMART	rho_sub_3	20	181	IPR001806	GO:0003924\|GO:0005525
Cpe11g01119	698	ProSiteProfiles	Protein kinase domain profile.	237	639	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Cpe11g01119	698	ProSiteProfiles	small GTPase Rab1 family profile.	13	228	-	-
Cpe11g01119	698	SMART	serkin_6	237	639	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Pathway

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cpe11g01119	-	-	-	csv:101209606	855.899

WGDs- Genes

Select	Gene_1	Gene_2	Event_name
	Cpe04g01119	Cpe11g01119	CCT

Dupl-types

Gene1	Location1	Gene2	Location2	E-value	Duplicated-type
Cpe07g01020	Cpe-Chr7:9232528	Cpe11g01119	Cpe-Chr11:9305654	2.26E-16	dispersed
Cpe11g01119	Cpe-Chr11:9305654	Cpe04g01544	Cpe-Chr4:12102510	1.41E-90	dispersed
Cpe11g01119	Cpe-Chr11:9305654	Cpe04g01119	Cpe-Chr4:9684438	5.73E-98	wgd
Cpe11g01119	Cpe-Chr11:9305654	Cpe07g01019	Cpe-Chr7:9229369	0	wgd

Deco-Alignment

Select	Vvi1	Blo1	Blo2	Bda1	Bda2	Bpe1	Bpe2	Bma1	Bma2	Cmo1	Cmo2	Cma1	Cma2	Car1	Car2	Sed1	Cpe1	Cpe2	Bhi1	Tan1	Cmetu1	Lac1	Hepe1	Mch1	Lcy1	Cla1	Cam1	Cec1	Cco1	Clacu1	Cmu1	Cre1	Cone1	Cone2	Cone3	Cone4	Lsi1	Csa1	Chy1	Cme1	Blo3	Blo4	Bda3	Bda4	Bpe3	Bpe4	Bma3	Bma4	Sed2	Cmo3	Cmo4	Cma3	Cma4	Car3	Car4	Cpe3	Cpe4	Bhi2	Tan2	Cmetu2	Lac2	Hepe2	Mch2	Lcy2	Cla2	Cam2	Cec2	Cco2	Clacu2	Cmu2	Cre2	Lsi2	Csa2	Chy2	Cme2
	Vvi11g314	.	Blo16g00817	.	.	Bpe01g00539	.	Bma07g00498	Bma11g00525	.	Cmo11g00629	Cma05g01347	Cma12g01260	Car05g01261	.	.	Cpe04g01119	.	.	.	.	.	.	.	.	Cla11g00213	.	Cec11g0245	Cco11g0256	Clacu11g0375	Cmu11g0225	Cre11g0722	.	.	Cone4ag0743	.	Lsi06g00853	Csa02g00115	Chy05g01378	.	Blo08g00298	Blo14g00503	Bda02g00435	Bda09g01145	Bpe08g00481	Bpe13g01083	.	.	Sed08g0781	Cmo05g01356	Cmo12g01290	.	.	.	Car11g00504	Cpe11g01119	.	Bhi06g02015	Tan08g0156	Cmetu02g0088	.	.	.	.	Cla06g00868	.	Cec06g0954	Cco06g0983	Clacu06g0943	Cmu06g0909	Cre06g1691	Lsi11g00250	.	Chy02g01847	Cme05g01985

Syn-Families

Gene	Event_type	S_start	S_end	Function	Ath_gene	Identity(%)	E-value	Score
Cpe01g01276	.	1	294	Core Cell Cycle Gene Families	AT3G48750	85.7	2.5e-151	531.9
Cpe09g00381	.	1	362	Core Cell Cycle Gene Families	AT3G48750	69.6	2.3e-141	498.8
Cpe19g00180	.	738	1012	Core Cell Cycle Gene Families	AT3G48750	56.2	5.6e-87	318.2
Cpe02g00013	.	11	296	Core Cell Cycle Gene Families	AT3G48750	50.3	2.6e-84	309.3
Cpe19g00180	.	738	1012	Core Cell Cycle Gene Families	AT3G54180	84.2	4.8e-137	484.6
Cpe02g00013	.	11	299	Core Cell Cycle Gene Families	AT3G54180	62.5	2.1e-108	389.4
Cpe01g01276	.	1	290	Core Cell Cycle Gene Families	AT3G54180	54.1	2.1e-92	336.3
Cpe09g00381	.	1	270	Core Cell Cycle Gene Families	AT3G54180	54.0	1.2e-84	310.5
Cpe19g00180	.	738	1012	Core Cell Cycle Gene Families	AT2G38620	70.5	1.2e-106	383.3
Cpe02g00013	.	11	299	Core Cell Cycle Gene Families	AT2G38620	54.0	3.8e-84	308.5
Cpe02g00013	.	1	296	Core Cell Cycle Gene Families	AT1G76540	81.1	2.5e-146	515.4
Cpe19g00180	.	736	1012	Core Cell Cycle Gene Families	AT1G76540	65.0	5.7e-106	381.3
Cpe01g01276	.	1	290	Core Cell Cycle Gene Families	AT1G76540	53.7	1.1e-93	340.5
Cpe09g00381	.	1	274	Core Cell Cycle Gene Families	AT1G76540	52.5	5.6e-85	311.6
Cpe02g00013	.	8	296	Core Cell Cycle Gene Families	AT1G20930	85.0	2.5e-149	525.4
Cpe19g00180	.	736	1012	Core Cell Cycle Gene Families	AT1G20930	66.4	2.1e-108	389.4
Cpe01g01276	.	1	290	Core Cell Cycle Gene Families	AT1G20930	55.7	6.4e-97	351.3
Cpe09g00381	.	1	274	Core Cell Cycle Gene Families	AT1G20930	54.6	7.1e-88	321.2
Cpe16g00933	.	1	542	Core Cell Cycle Gene Families	AT5G10270	70.7	3.9e-213	738.0
Cpe01g02197	.	42	538	Core Cell Cycle Gene Families	AT5G10270	70.1	2.5e-191	665.6
Cpe02g01011	.	145	461	Core Cell Cycle Gene Families	AT5G10270	53.2	3.5e-97	352.8
Cpe20g00292	CCT	93	409	Core Cell Cycle Gene Families	AT5G10270	53.5	5.1e-96	349.0
Cpe03g01388	CST	114	430	Core Cell Cycle Gene Families	AT5G10270	52.3	8.7e-96	348.2
Cpe09g00946	CCT	93	409	Core Cell Cycle Gene Families	AT5G10270	52.6	5.6e-95	345.5
Cpe14g00334	CCT,CST	123	439	Core Cell Cycle Gene Families	AT5G10270	54.1	9.6e-95	344.7
Cpe20g00057	.	119	415	Core Cell Cycle Gene Families	AT5G10270	51.4	9.6e-87	318.2
Cpe16g00777	CCT,CST,ECH	149	447	Core Cell Cycle Gene Families	AT5G10270	50.5	4.8e-86	315.8
Cpe02g01045	.	119	409	Core Cell Cycle Gene Families	AT5G10270	51.5	1.5e-84	310.8
Cpe01g00492	CCT,CST	337	615	Core Cell Cycle Gene Families	AT5G10270	54.2	7.6e-84	308.5
Cpe04g00238	.	3	267	Core Cell Cycle Gene Families	AT5G10270	51.1	9.3e-82	301.6
Cpe07g00932	CST	3	267	Core Cell Cycle Gene Families	AT5G10270	51.8	3.9e-80	296.2
Cpe01g02197	.	90	537	Core Cell Cycle Gene Families	AT5G64960	72.2	3.1e-177	618.6
Cpe16g00933	.	65	541	Core Cell Cycle Gene Families	AT5G64960	66.5	3.0e-172	602.1
Cpe16g00777	CCT,CST,ECH	800	1062	Core Cell Cycle Gene Families	AT5G64960	54.0	1.9e-81	300.4
Cpe04g00238	.	3	267	Core Cell Cycle Gene Families	AT5G64960	51.1	1.2e-80	297.7
Cpe20g00292	CCT	147	409	Core Cell Cycle Gene Families	AT5G64960	53.2	2.1e-80	297.0
Cpe05g01500	CCT,CST,ECH	170	434	Core Cell Cycle Gene Families	AT5G64960	52.1	7.9e-80	295.0
Cpe02g01011	.	199	461	Core Cell Cycle Gene Families	AT5G64960	52.5	1.4e-79	294.3
Cpe09g00946	CCT	147	409	Core Cell Cycle Gene Families	AT5G64960	52.2	2.3e-79	293.5
Cpe03g01388	CST	168	430	Core Cell Cycle Gene Families	AT5G64960	51.4	3.0e-79	293.1
Cpe14g00334	CCT,CST	177	439	Core Cell Cycle Gene Families	AT5G64960	53.6	8.8e-79	291.6
Cpe07g00932	CST	3	267	Core Cell Cycle Gene Families	AT5G64960	50.7	3.3e-78	289.7
Cpe01g00492	CCT,CST	378	615	Core Cell Cycle Gene Families	AT5G64960	53.8	8.0e-72	268.5
Cpe20g00057	.	173	415	Core Cell Cycle Gene Families	AT5G64960	50.8	1.1e-70	264.6
Cpe02g01045	.	173	409	Core Cell Cycle Gene Families	AT5G64960	50.8	1.8e-68	257.3
Cpe04g01385	CCT	4	414	Core Cell Cycle Gene Families	AT1G73690	74.5	9.0e-173	603.6
Cpe18g00688	.	427	817	Core Cell Cycle Gene Families	AT1G73690	69.8	2.8e-158	555.4
Cpe04g01385	CCT	12	342	Core Cell Cycle Gene Families	AT1G66750	77.1	1.3e-154	543.1
Cpe18g00688	.	435	746	Core Cell Cycle Gene Families	AT1G66750	72.3	4.7e-141	498.0
Cpe04g01385	CCT	8	415	Core Cell Cycle Gene Families	AT1G18040	75.0	3.1e-173	605.1
Cpe18g00688	.	431	818	Core Cell Cycle Gene Families	AT1G18040	71.0	1.2e-158	556.6
Cpe19g00086	.	20	464	Core Cell Cycle Gene Families	AT5G63610	77.8	1.8e-196	682.6
Cpe11g01119	CCT	217	697	Core Cell Cycle Gene Families	AT4G28980	61.0	3.6e-168	588.6
Cpe07g01019	.	1	482	Core Cell Cycle Gene Families	AT4G28980	59.2	1.2e-166	583.6
Cpe13g00635	.	5	491	Core Cell Cycle Gene Families	AT1G44110	60.5	5.0e-151	531.6
Cpe01g02068	.	1	218	Core Cell Cycle Gene Families	AT1G44110	70.8	2.4e-92	336.7
Cpe12g00714	CST	207	503	Core Cell Cycle Gene Families	AT1G44110	53.2	9.4e-89	324.7
Cpe17g00601	CST	226	504	Core Cell Cycle Gene Families	AT1G44110	54.1	2.3e-87	320.1
Cpe02g00434	.	203	466	Core Cell Cycle Gene Families	AT1G44110	57.6	2.0e-86	317.0
Cpe02g00206	CCT,CST,ECH	286	569	Core Cell Cycle Gene Families	AT1G44110	52.5	2.9e-82	303.1
Cpe06g00185	CCT,CST,ECH	94	377	Core Cell Cycle Gene Families	AT1G44110	51.8	3.6e-80	296.2
Cpe07g00503	CCT,CST,ECH	83	373	Core Cell Cycle Gene Families	AT1G44110	51.2	5.1e-79	292.4
Cpe01g02068	.	1	216	Core Cell Cycle Gene Families	AT1G77390	61.5	2.1e-77	287.0
Cpe12g00714	CST	225	499	Core Cell Cycle Gene Families	AT1G77390	52.0	6.0e-77	285.4
Cpe17g00601	CST	225	500	Core Cell Cycle Gene Families	AT1G77390	51.1	1.3e-76	284.3
Cpe02g00434	.	203	470	Core Cell Cycle Gene Families	AT1G77390	53.0	2.3e-76	283.5
Cpe02g00206	CCT,CST,ECH	291	567	Core Cell Cycle Gene Families	AT1G77390	50.9	3.1e-73	273.1
Cpe02g00434	.	15	466	Core Cell Cycle Gene Families	AT5G25380	53.9	6.2e-114	408.3
Cpe17g00601	CST	224	504	Core Cell Cycle Gene Families	AT5G25380	63.3	2.5e-99	359.8
Cpe12g00714	CST	223	503	Core Cell Cycle Gene Families	AT5G25380	63.7	4.3e-99	359.0
Cpe13g00635	.	211	486	Core Cell Cycle Gene Families	AT5G25380	53.6	7.6e-80	295.0
Cpe06g00185	CCT,CST,ECH	98	370	Core Cell Cycle Gene Families	AT5G25380	50.5	4.5e-72	269.2
Cpe01g02068	.	1	215	Core Cell Cycle Gene Families	AT5G25380	53.5	8.8e-60	228.4
Cpe17g00601	CST	219	445	Core Cell Cycle Gene Families	AT5G11300	64.3	6.0e-79	292.0
Cpe07g00263	.	52	372	Core Cell Cycle Gene Families	AT5G11300	51.6	6.1e-71	265.4
Cpe13g00635	.	211	431	Core Cell Cycle Gene Families	AT5G11300	56.1	3.1e-67	253.1
Cpe07g00503	CCT,CST,ECH	90	310	Core Cell Cycle Gene Families	AT5G11300	52.5	3.7e-60	229.6
Cpe06g00185	CCT,CST,ECH	94	314	Core Cell Cycle Gene Families	AT5G11300	54.3	4.8e-60	229.2
Cpe02g00206	CCT,CST,ECH	286	506	Core Cell Cycle Gene Families	AT5G11300	53.8	2.4e-59	226.9
Cpe11g00133	CCT,CST,ECH	91	296	Core Cell Cycle Gene Families	AT5G11300	51.9	2.5e-56	216.9
Cpe01g02068	.	1	179	Core Cell Cycle Gene Families	AT5G11300	55.7	3.2e-48	189.9
Cpe12g00714	CST	157	503	Core Cell Cycle Gene Families	AT1G15570	61.0	5.5e-118	421.8
Cpe17g00601	CST	157	504	Core Cell Cycle Gene Families	AT1G15570	61.3	7.2e-118	421.4
Cpe02g00434	.	204	467	Core Cell Cycle Gene Families	AT1G15570	62.1	3.2e-94	342.8
Cpe13g00635	.	195	490	Core Cell Cycle Gene Families	AT1G15570	51.8	2.3e-79	293.5
Cpe07g00503	CCT,CST,ECH	76	362	Core Cell Cycle Gene Families	AT1G15570	50.5	4.9e-74	275.8
Cpe17g00601	CST	4	504	Core Cell Cycle Gene Families	AT1G80370	51.0	1.5e-118	423.7
Cpe12g00714	CST	4	503	Core Cell Cycle Gene Families	AT1G80370	50.6	1.2e-115	414.1
Cpe13g00635	.	212	491	Core Cell Cycle Gene Families	AT1G80370	54.6	2.7e-80	296.6
Cpe07g00503	CCT,CST,ECH	88	370	Core Cell Cycle Gene Families	AT1G80370	52.3	2.0e-75	280.4
Cpe11g00133	CCT,CST,ECH	91	359	Core Cell Cycle Gene Families	AT1G80370	51.3	4.2e-73	272.7
Cpe01g02068	.	1	216	Core Cell Cycle Gene Families	AT1G80370	50.6	1.4e-55	214.5
Cpe07g00503	CCT,CST,ECH	3	372	Core Cell Cycle Gene Families	AT5G43080	57.4	5.6e-110	394.8
Cpe02g00206	CCT,CST,ECH	195	572	Core Cell Cycle Gene Families	AT5G43080	56.4	1.6e-109	393.3
Cpe11g00133	CCT,CST,ECH	6	361	Core Cell Cycle Gene Families	AT5G43080	57.7	3.6e-109	392.1
Cpe06g00185	CCT,CST,ECH	1	380	Core Cell Cycle Gene Families	AT5G43080	56.1	4.7e-109	391.7
Cpe13g00635	.	213	492	Core Cell Cycle Gene Families	AT5G43080	52.5	1.0e-79	294.3
Cpe17g00601	CST	227	504	Core Cell Cycle Gene Families	AT5G43080	52.0	6.9e-76	281.6
Cpe02g00434	.	205	487	Core Cell Cycle Gene Families	AT5G43080	50.2	6.5e-74	275.0
Cpe07g00503	CCT,CST,ECH	1	372	Core Cell Cycle Gene Families	AT1G47210	58.4	1.7e-117	419.9
Cpe11g00133	CCT,CST,ECH	1	361	Core Cell Cycle Gene Families	AT1G47210	56.6	8.9e-114	407.5
Cpe06g00185	CCT,CST,ECH	1	380	Core Cell Cycle Gene Families	AT1G47210	55.6	1.1e-111	400.6
Cpe02g00206	CCT,CST,ECH	195	572	Core Cell Cycle Gene Families	AT1G47210	53.8	1.6e-110	396.7
Cpe17g00601	CST	227	499	Core Cell Cycle Gene Families	AT1G47210	51.4	1.5e-76	283.9
Cpe12g00714	CST	226	498	Core Cell Cycle Gene Families	AT1G47210	50.7	1.1e-74	277.7
Cpe02g00206	CCT,CST,ECH	270	570	Core Cell Cycle Gene Families	AT1G47220	55.8	4.9e-92	335.1
Cpe06g00185	CCT,CST,ECH	94	378	Core Cell Cycle Gene Families	AT1G47220	58.9	1.4e-91	333.6
Cpe07g00503	CCT,CST,ECH	77	372	Core Cell Cycle Gene Families	AT1G47220	55.6	4.3e-88	322.0
Cpe11g00133	CCT,CST,ECH	91	361	Core Cell Cycle Gene Families	AT1G47220	56.2	1.3e-84	310.5
Cpe02g00434	.	205	464	Core Cell Cycle Gene Families	AT1G47220	51.5	8.5e-68	254.6
Cpe02g00206	CCT,CST,ECH	195	572	Core Cell Cycle Gene Families	AT1G47230	57.3	6.5e-117	417.9
Cpe06g00185	CCT,CST,ECH	1	380	Core Cell Cycle Gene Families	AT1G47230	57.0	6.8e-114	407.9
Cpe07g00503	CCT,CST,ECH	1	372	Core Cell Cycle Gene Families	AT1G47230	56.8	1.7e-112	403.3
Cpe11g00133	CCT,CST,ECH	1	361	Core Cell Cycle Gene Families	AT1G47230	56.2	3.5e-110	395.6
Cpe13g00635	.	214	495	Core Cell Cycle Gene Families	AT1G47230	50.9	8.6e-77	284.6
Cpe17g00601	CST	229	499	Core Cell Cycle Gene Families	AT1G47230	52.4	8.9e-74	274.6
Cpe12g00714	CST	228	498	Core Cell Cycle Gene Families	AT1G47230	51.3	1.7e-72	270.4
Cpe19g00246	.	1	449	Core Cell Cycle Gene Families	AT4G37490	53.2	1.0e-113	407.5
Cpe19g00245	.	1	448	Core Cell Cycle Gene Families	AT4G37490	52.6	3.6e-111	399.1
Cpe19g00247	.	1	448	Core Cell Cycle Gene Families	AT4G37490	52.3	5.2e-110	395.2
Cpe19g00245	.	1	345	Core Cell Cycle Gene Families	AT5G06150	53.8	1.2e-82	303.9
Cpe19g00246	.	1	346	Core Cell Cycle Gene Families	AT5G06150	54.7	1.2e-82	303.9
Cpe19g00247	.	1	345	Core Cell Cycle Gene Families	AT5G06150	54.7	2.1e-82	303.1
Cpe02g00037	.	114	286	Core Cell Cycle Gene Families	AT5G06150	53.8	1.9e-46	183.7
Cpe19g00246	.	1	406	Core Cell Cycle Gene Families	AT3G11520	55.8	3.3e-103	372.5
Cpe19g00245	.	1	405	Core Cell Cycle Gene Families	AT3G11520	55.0	2.1e-102	369.8
Cpe19g00247	.	1	405	Core Cell Cycle Gene Families	AT3G11520	55.0	4.7e-102	368.6
Cpe19g00246	.	17	442	Core Cell Cycle Gene Families	AT2G26760	50.7	2.0e-100	363.2
Cpe19g00245	.	89	441	Core Cell Cycle Gene Families	AT2G26760	55.8	2.2e-99	359.8
Cpe19g00895	.	48	461	Core Cell Cycle Gene Families	AT2G17620	61.6	2.8e-127	452.6
Cpe10g00711	.	32	426	Core Cell Cycle Gene Families	AT2G17620	62.0	3.2e-123	439.1
Cpe02g00037	.	56	390	Core Cell Cycle Gene Families	AT2G17620	59.2	1.0e-105	380.9
Cpe10g00711	.	28	383	Core Cell Cycle Gene Families	AT4G35620	61.2	8.5e-104	374.4
Cpe19g00895	.	28	418	Core Cell Cycle Gene Families	AT4G35620	56.5	3.2e-103	372.5
Cpe02g00037	.	107	345	Core Cell Cycle Gene Families	AT4G35620	66.1	4.0e-85	312.4
Cpe02g00037	.	34	388	Core Cell Cycle Gene Families	AT1G20610	67.9	2.7e-130	462.6
Cpe10g00711	.	1	426	Core Cell Cycle Gene Families	AT1G20610	55.3	5.8e-117	418.3
Cpe19g00895	.	64	461	Core Cell Cycle Gene Families	AT1G20610	57.8	2.9e-116	416.0
Cpe02g00037	.	27	285	Core Cell Cycle Gene Families	AT1G76310	65.0	5.7e-83	305.1
Cpe10g00711	.	1	322	Core Cell Cycle Gene Families	AT1G76310	53.2	1.9e-78	290.0
Cpe19g00895	.	24	358	Core Cell Cycle Gene Families	AT1G76310	50.6	1.4e-73	273.9
Cpe19g00245	.	176	341	Core Cell Cycle Gene Families	AT1G76310	52.4	7.0e-41	165.2
Cpe19g00246	.	177	342	Core Cell Cycle Gene Families	AT1G76310	52.4	7.0e-41	165.2
Cpe19g00247	.	176	341	Core Cell Cycle Gene Families	AT1G76310	52.4	7.0e-41	165.2
Cpe15g00905	.	285	603	Core Cell Cycle Gene Families	AT1G16330	57.9	1.8e-101	367.5
Cpe01g00261	.	1	326	Core Cell Cycle Gene Families	AT1G70210	64.4	6.6e-108	387.9
Cpe11g00745	.	1	329	Core Cell Cycle Gene Families	AT1G70210	62.5	4.8e-106	381.7
Cpe07g00622	.	1	323	Core Cell Cycle Gene Families	AT1G70210	60.5	1.8e-100	363.2
Cpe01g01409	.	1	327	Core Cell Cycle Gene Families	AT1G70210	61.4	3.3e-99	359.0
Cpe10g00541	.	47	309	Core Cell Cycle Gene Families	AT2G22490	55.0	6.5e-77	285.0
Cpe19g00744	.	30	313	Core Cell Cycle Gene Families	AT2G22490	51.5	6.5e-77	285.0
Cpe07g00622	.	38	230	Core Cell Cycle Gene Families	AT2G22490	50.8	3.8e-45	179.5
Cpe01g00427	CCT,CST,ECH	5	340	Core Cell Cycle Gene Families	AT4G34160	52.1	1.8e-77	287.0
Cpe11g00137	CCT,CST,ECH	43	318	Core Cell Cycle Gene Families	AT4G34160	50.2	4.4e-68	255.8
Cpe06g00180	CCT,CST,ECH	71	300	Core Cell Cycle Gene Families	AT4G34160	54.3	2.2e-64	243.4
Cpe04g00298	CCT,CST,ECH	60	292	Core Cell Cycle Gene Families	AT4G34160	50.2	2.8e-59	226.5
Cpe15g00473	CCT,CST,ECH	57	291	Core Cell Cycle Gene Families	AT4G34160	50.6	1.1e-58	224.6
Cpe10g00541	.	41	244	Core Cell Cycle Gene Families	AT5G65420	64.7	4.4e-70	261.9
Cpe19g00744	.	41	242	Core Cell Cycle Gene Families	AT5G65420	59.8	1.7e-61	233.4
Cpe11g00467	.	26	230	Core Cell Cycle Gene Families	AT5G65420	54.1	6.0e-59	224.9
Cpe07g00182	.	59	251	Core Cell Cycle Gene Families	AT5G65420	55.6	1.0e-58	224.2
Cpe10g00541	.	16	220	Core Cell Cycle Gene Families	AT5G10440	55.8	1.0e-56	217.2
Cpe07g00182	.	54	229	Core Cell Cycle Gene Families	AT5G10440	52.8	7.1e-50	194.5
Cpe19g00744	.	43	218	Core Cell Cycle Gene Families	AT5G10440	55.4	4.6e-49	191.8
Cpe11g00467	.	21	176	Core Cell Cycle Gene Families	AT5G10440	57.7	1.7e-48	189.9
Cpe19g00597	.	1	271	Core Cell Cycle Gene Families	AT5G27620	65.3	1.9e-98	356.3
Cpe05g00396	.	1	86	Core Cell Cycle Gene Families	AT2G27960	90.7	5.6e-43	170.2
Cpe20g00722	CCT	1	86	Core Cell Cycle Gene Families	AT2G27960	89.5	1.6e-42	168.7
Cpe16g00498	CCT	1	86	Core Cell Cycle Gene Families	AT2G27960	88.4	1.4e-41	165.6
Cpe05g00396	.	1	76	Core Cell Cycle Gene Families	AT2G27970	92.1	2.1e-39	158.3
Cpe20g00722	CCT	1	83	Core Cell Cycle Gene Families	AT2G27970	83.1	3.1e-38	154.5
Cpe16g00498	CCT	1	76	Core Cell Cycle Gene Families	AT2G27970	89.5	5.2e-38	153.7
Cpe01g01194	.	48	1052	Core Cell Cycle Gene Families	AT3G12280	70.9	0.0e+00	1375.1
Cpe09g00459	.	1	1002	Core Cell Cycle Gene Families	AT3G12280	69.4	0.0e+00	1331.6
Cpe17g00799	.	2	485	Core Cell Cycle Gene Families	AT1G02970	59.5	3.8e-160	562.0

Syn-Orthogroups

Select	Orthogroup	Bda	Bhi	Blo	Bma	Bpe	Cam	Car	Cco	Cec	Chy	Cla	Clacu	Cma	Cme	Cmetu	Cmo	Cmu	Cone	Cpe	Cre	Csa	HCH	Hepe	Lac	Lcy	Lsi	Mch	Sed	Tan	Vvi	Total
	OG0007745	1	1	1	1	1	1	2	1	1	1	1	1	2	1	1	2	1	1	2	1	1	1	1	1	1	1	1	1	2	1	35

Regulatory proteins

Select	Gene	Hmm_acc	Hmm_name	Score	E-value	Regulatory Factors	Family
	62728	PF00069	Pkinase	1.50E-31	CL0016	Cpe	PK

Transcriptome

Select	Gene	Chr	Type	da1	da2	da3	da4	da5	da6	da7	da8	da9	da10
	Cpe11g01119	Cpe_Chr11	FPKM	4.884979	4.013543	12.009349	9.809651	40.393032	37.851002	39.631927	23.171036	26.186533	21.378651