Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe11g01145 ATGTCGTGGCAAACATATGTCGATGACCATTTGATGTGCGACATTGATGGCCAAGGCCAGCACCTCACCGCCGCTGCCATTATTGGCCACGATGGCAGCGTCTGGGCTCAGAGCACCTCATTTCCTCAGTACAAGCCTGAGGAGATCACTGGTATCATGAAGGATTTTGATGAACCTGGTTATCTTGCACCTACTGGATTACACCTTGCAGGTACAAAGTACATGGTTATCCAAGGCGAGCCTGGAGCAGTCATCCGTGGAAAGAAGGGGTCTGGAGGAATTACCATAAAGAAGACTGGGCAAGCTCTAGTTTTTGGCATTTATGAAGAACCTGTTACTCCAGGGCAGTGCAACATGGTCGTTGAGAGGCTTGGCGATTACCTCGTCGATCAGGGTCTGTAG 402 50.0 MSWQTYVDDHLMCDIDGQGQHLTAAAIIGHDGSVWAQSTSFPQYKPEEITGIMKDFDEPGYLAPTGLHLAGTKYMVIQGEPGAVIRGKKGSGGITIKKTGQALVFGIYEEPVTPGQCNMVVERLGDYLVDQGL 133
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 9479625 9480776 - Cp4.1LG11g11530.1 Cpe11g01145 477939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe11g01145 133 PANTHER PROFILIN 1 133 - -
Cpe11g01145 133 Pfam Profilin 1 132 IPR005455 GO:0003779
Cpe11g01145 133 PRINTS Profilin signature 3 12 IPR005455 GO:0003779
Cpe11g01145 133 PRINTS Profilin signature 23 32 IPR005455 GO:0003779
Cpe11g01145 133 PRINTS Profilin signature 42 62 IPR005455 GO:0003779
Cpe11g01145 133 PRINTS Profilin signature 66 80 IPR005455 GO:0003779
Cpe11g01145 133 PRINTS Profilin signature 102 115 IPR005455 GO:0003779
Cpe11g01145 133 PRINTS Profilin signature 115 132 IPR005455 GO:0003779
Cpe11g01145 133 PANTHER PROFILIN 1 133 IPR005455 GO:0003779
Cpe11g01145 133 SMART prof_2 1 133 IPR005455 GO:0003779
Cpe11g01145 133 Gene3D Dynein light chain 2a, cytoplasmic 1 133 - -
Cpe11g01145 133 SUPERFAMILY Profilin (actin-binding protein) 2 132 IPR036140 -
Cpe11g01145 133 CDD PROF 2 132 IPR005455 GO:0003779
Cpe11g01145 133 ProSitePatterns Profilin signature. 1 8 IPR027310 GO:0003779
Cpe11g01145 133 PRINTS Plant profilin signature 1 14 IPR005455 GO:0003779
Cpe11g01145 133 PRINTS Plant profilin signature 29 42 IPR005455 GO:0003779
Cpe11g01145 133 PRINTS Plant profilin signature 54 68 IPR005455 GO:0003779
Cpe11g01145 133 PRINTS Plant profilin signature 73 82 IPR005455 GO:0003779
Cpe11g01145 133 PRINTS Plant profilin signature 86 101 IPR005455 GO:0003779
Cpe11g01145 133 PRINTS Plant profilin signature 106 119 IPR005455 GO:0003779
Cpe11g01145 133 PRINTS Plant profilin signature 119 132 IPR005455 GO:0003779
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g01699 Cpe-Chr2:13966508 Cpe11g01145 Cpe-Chr11:9479625 4.92E-76 dispersed
Cpe03g01090 Cpe-Chr3:9000799 Cpe11g01145 Cpe-Chr11:9479625 1.55E-77 dispersed
Cpe07g01035 Cpe-Chr7:9318854 Cpe11g01145 Cpe-Chr11:9479625 1.52E-74 dispersed
Cpe11g01145 Cpe-Chr11:9479625 Cpe11g01155 Cpe-Chr11:9529439 8.40E-97 dispersed
Cpe11g01144 Cpe-Chr11:9475430 Cpe11g01145 Cpe-Chr11:9479625 1.00E-64 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe11g01145 K05759 - twl:120006331 257.299