Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe11g01155 ATGTCGTGGCAAACATATGTCGATGACCATTTGATGTGCGACATTGATGGCCAAGGCCAGCACCTCACCGCCGCTGCCATTATTGGCCACGATGGCAGCGTCTGGGCTCAGAGCACCTCATTTCCTCAGTACAAGCCTGAGGAGATCACTGGTATCATGAAGGATTTTGATGAACCTGGTTATCTTGCACCTACTGGATTACACCTTGCAGGTACAAAGTACATGGTTATCCAAGGCGAGCCTGGAGCAGTCATCCGTGGAAAGAAGGGGTCTGGAGGAATTACCATAAAGAAGACTGGGCAAGCTCTAGTTTTTGGCATTTATGAAGAACCTGTTACTCCAGGGCAGTGCAACATGGTCGTTGAGAGGCTTGGCGATTACCTCGTCGATCAGGGTCTGTAG 402 50.0 MSWQTYVDDHLMCDIDGQGQHLTAAAIIGHDGSVWAQSTSFPQYKPEEITGIMKDFDEPGYLAPTGLHLAGTKYMVIQGEPGAVIRGKKGSGGITIKKTGQALVFGIYEEPVTPGQCNMVVERLGDYLVDQGL 133
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 9529439 9530590 - Cp4.1LG11g11600.1 Cpe11g01155 477949
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe11g01155 133 PANTHER PROFILIN 1 133 - -
Cpe11g01155 133 Pfam Profilin 1 132 IPR005455 GO:0003779
Cpe11g01155 133 PRINTS Profilin signature 3 12 IPR005455 GO:0003779
Cpe11g01155 133 PRINTS Profilin signature 23 32 IPR005455 GO:0003779
Cpe11g01155 133 PRINTS Profilin signature 42 62 IPR005455 GO:0003779
Cpe11g01155 133 PRINTS Profilin signature 66 80 IPR005455 GO:0003779
Cpe11g01155 133 PRINTS Profilin signature 102 115 IPR005455 GO:0003779
Cpe11g01155 133 PRINTS Profilin signature 115 132 IPR005455 GO:0003779
Cpe11g01155 133 PANTHER PROFILIN 1 133 IPR005455 GO:0003779
Cpe11g01155 133 SMART prof_2 1 133 IPR005455 GO:0003779
Cpe11g01155 133 Gene3D Dynein light chain 2a, cytoplasmic 1 133 - -
Cpe11g01155 133 SUPERFAMILY Profilin (actin-binding protein) 2 132 IPR036140 -
Cpe11g01155 133 CDD PROF 2 132 IPR005455 GO:0003779
Cpe11g01155 133 ProSitePatterns Profilin signature. 1 8 IPR027310 GO:0003779
Cpe11g01155 133 PRINTS Plant profilin signature 1 14 IPR005455 GO:0003779
Cpe11g01155 133 PRINTS Plant profilin signature 29 42 IPR005455 GO:0003779
Cpe11g01155 133 PRINTS Plant profilin signature 54 68 IPR005455 GO:0003779
Cpe11g01155 133 PRINTS Plant profilin signature 73 82 IPR005455 GO:0003779
Cpe11g01155 133 PRINTS Plant profilin signature 86 101 IPR005455 GO:0003779
Cpe11g01155 133 PRINTS Plant profilin signature 106 119 IPR005455 GO:0003779
Cpe11g01155 133 PRINTS Plant profilin signature 119 132 IPR005455 GO:0003779
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe11g01145 Cpe-Chr11:9479625 Cpe11g01155 Cpe-Chr11:9529439 8.40E-97 dispersed
Cpe11g01155 Cpe-Chr11:9529439 Cpe17g00524 Cpe-Chr17:4370964 6.88E-82 dispersed
Cpe11g01155 Cpe-Chr11:9529439 Cpe07g01035 Cpe-Chr7:9318854 1.36E-74 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe11g01155 K05759 - twl:120006331 257.299