Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe11g01158 | ATGAAGATCGTGGAATTGGAAGATGCTGGGAATGATCGGGAAAATGGAATGGGTAGCGATCAGATTGTGAAGGTCGATGCCAAAAGAGCGTTGGTTGGGGCTGGGGCTCGAATCCTGTTTTACCCTACCCTTCTGTATAACGTTCTTCGGAATAAAATGGAGGCTGAATTCAGATGGTGGGATGAAATCGATCAGATTTGTCTCTGCATTATACTGATCAAGGATTTTCCATTGAGTTTTTCTGTCATTAATGTCAAGAACTTTGTCTTGCCTTCCCAGTTTCTTTTGCTCGGTGCAGTGCCGTTCCCCAAAGACGTGCCGAGGTTGAAGGAGCTCGGTGTCGGTGGTGTTATCACTCTCAATGAACCTTATGAAACATTAGTTCCATCTTCGTTGTATTATCGCTATGGAATCGATCATTTAAAGATCCCGACGAGAGATTATTGTTTTGCTCCGAAATTTTCTGATATTAGTCGAGCTGTGGACTTCATTCACAGAAACGCGTTGTGTGGTAAAACAACGTACGTCCATTGTAAAGCGGGGCGAGGAAGGAGCACGACCATTGTGCTTTGCTATTTGGTCAAATATAAGCACATGACCCCATCTGCTGCGCTGGAATACGTGCGCTCGAGAAGACCACGGGTGTTGCTCGCCCCCTCACAGTGGGAGGCTGTTCAAGAATACAGCAACCGTCGACCCGTTGCAAGTTCTAGCCCTCCCTCAGGAGGAGATGCAGTCCTGATTACGAAAGACGATCTAGAAGGATATCACGGTACGTGCATCGACAGTGCAGGTAGAGAACTTGCAGTTGGCCCTTGGATGGGTAAGTCAAAGCCAATGATAGCAAGGTTGTCCTGCCTCTTTTCGTCGTTGTTAGTTCATGGCAGCAGTGGATCTCTCATGAAGCGTCTGCCGGTGTCGGAGGCTCGAGCTTGTTGA | 939 | 47.6 | MKIVELEDAGNDRENGMGSDQIVKVDAKRALVGAGARILFYPTLLYNVLRNKMEAEFRWWDEIDQICLCIILIKDFPLSFSVINVKNFVLPSQFLLLGAVPFPKDVPRLKELGVGGVITLNEPYETLVPSSLYYRYGIDHLKIPTRDYCFAPKFSDISRAVDFIHRNALCGKTTYVHCKAGRGRSTTIVLCYLVKYKHMTPSAALEYVRSRRPRVLLAPSQWEAVQEYSNRRPVASSSPPSGGDAVLITKDDLEGYHGTCIDSAGRELAVGPWMGKSKPMIARLSCLFSSLLVHGSSGSLMKRLPVSEARAC | 312 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 9541388 | 9543690 | + | Cp4.1LG11g11570.1 | Cpe11g01158 | 477952 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe11g01158 | 312 | CDD | PTPMT1 | 93 | 231 | IPR044596 | GO:0004721 | |
Cpe11g01158 | 312 | Gene3D | Protein tyrosine phosphatase superfamily | 92 | 233 | IPR029021 | - | |
Cpe11g01158 | 312 | Pfam | Dual specificity phosphatase, catalytic domain | 131 | 230 | IPR000340 | GO:0008138|GO:0016311 | |
Cpe11g01158 | 312 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 93 | 229 | IPR029021 | - | |
Cpe11g01158 | 312 | SMART | dsp_5 | 90 | 231 | IPR020422 | GO:0006470|GO:0008138 | |
Cpe11g01158 | 312 | PANTHER | OS01G0739200 PROTEIN | 93 | 312 | - | - | |
Cpe11g01158 | 312 | ProSiteProfiles | Dual specificity protein phosphatase domain profile. | 84 | 234 | IPR020422 | GO:0006470|GO:0008138 | |
Cpe11g01158 | 312 | PANTHER | OS01G0739200 PROTEIN | 1 | 68 | - | - | |
Cpe11g01158 | 312 | PANTHER | - | 93 | 312 | - | - | |
Cpe11g01158 | 312 | PANTHER | - | 1 | 68 | - | - | |
Cpe11g01158 | 312 | ProSitePatterns | Tyrosine specific protein phosphatases active site. | 176 | 186 | IPR016130 | GO:0016311|GO:0016791 | |
Cpe11g01158 | 312 | ProSiteProfiles | Tyrosine specific protein phosphatases domain profile. | 155 | 223 | IPR000387 | GO:0016311|GO:0016791 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe11g01148 | Cpe-Chr11:9491701 | Cpe11g01158 | Cpe-Chr11:9541388 | 0 | dispersed | |
Cpe11g01158 | Cpe-Chr11:9541388 | Cpe14g00928 | Cpe-Chr14:7805755 | 5.51E-93 | dispersed | |
Cpe11g01158 | Cpe-Chr11:9541388 | Cpe07g01040 | Cpe-Chr7:9344160 | 1.32E-128 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe11g01158 | - | - | csv:101220751 | 511.916 |