Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe11g01195 ATGGTTCCACAGCGCCACCACAACAGCAACGATGGCGTTTCTCAACGGGTCAACAGCCCACGGTTCTCGGGTCCTATAACTCGTCGTGCACACTCCTTCAAGCGTAACAACAACAGCAATGACATTAATAATGGCACTAATTCGAACACCATCCAAAATAATGGGCTTAGTAGCCATCATGAGATTGATCTTCCTGTGAACTCACCCAGATCAGAAGCTTTCAGAAGCACGGTTCTAGTGGATGGCTTTGAATCCGGTTTGGAACGGAAGACAGGTCAACATGTTAGCCAGAGAACTCACGGGGGTGTTGCTGCTAAAAGTTTGTTAAATCCTGGTTTTGTTTCTCTGGACTTTAGGCTAAGGGAGAAAAGGAAACTGGGACATTTGATGTTCATGATGTTCTGTGGTCTTTGCTTGTTTCTGGGTATTCTCAAGATCTGCATGAATGGTTGGTTTGGATCAGTCATCGAGACCAACGAATCACATCAGGATAAACCCGACTCCATTACAAGTAGAAATCAAGTGGATCAGAAATCTCATAATCTTAGATATAGGGAAGGGGAAAGTAGTATGGAGCGAACTCCGATGATGGAATCACGTGTAGTCGGGAGTCAAAATGGTGTGGAGTATTCAGAAATCTGGACGAAACCCGACAGCGAGAATTTTGCTCCTTGCATCGACGAGGGAAGGCGCCACAAAAAGCTAGATGCGAAGACGAATGGATACATTCTCGTAAATGCCAACGGTGGCTTGAATCAGATGAGATTTGGGATCTGTGATATGGTTGTGATTGCAAAGGTTATGAAAGCAGTGCTCGTCCTTCCTTCGCTCGATCATAAGTCTTATTGGGCAGATGAAAGTGGCTTTAAAGATCTGTTCAATTGGCAACACTTTCTTCAGACATTGGAGAACGATGTTCATATAGTAGAGACACTACCACCCGCGTACGCCGAATTAGTGCCCTTCAACAAAACACCAATTTCTTGGTCCAAGACTGGTTACTATAAAGCAGAGGTCCTACCACTGCTGAAGCAGCATAAGGTGATGTATTTTACTCACACGGATTCCCGGCTGGCTAACAATGGTCTCTCGAGTTCTATACAGAAGTTGAGATGTCGTGTCAATTTCGAAGCGTTGAAATATTCAGCTCCAATTGAAGAGCTGGGGAACACCTTGGATATGCTGGCATTTACAGGCTGCAGTCATAATTTGACAACAGCCGAAGACGATGAGCTGCGTAGAATGCGTTATGAAGTTGCCCATTGGAAAGAGAAGGAAATCAACGGGACGGAGAGAAGGTTGCTCGGTGGCTGCCCGCTGACCCCAAGGGAGACTTCTCTTTTGCTCAGAGGCTTGGGGTTTCCTTCCAGCACCAGAATATATTTGGTAGCTGGTGAGGCTTATGGAAATGGAAGTATGCAATATCTTAAGGATCATTTCCCCAATATATATTCCCATTCTACACTCTCCACAGAAGATGAGTTGAATCCTTTCAAGAATCACCAGAACATGTTAGCTGGCATCGACTACGTCGTAGCCCTTCAAAGCGATGTTTTTATCTATACATATGATGGCAATATGGCGAAGGCAATTCAAGGTCACAGGCGTTTTGAGGGCTTCAAGAAGACCATAAGTCCAGACAAGGAGAATTTCGTCAAACTTGTCGATAACCTCGATGAAGGAAAGATATCGTGGAAAAAATTCAGTTCGAAAGTGAAAGCGCTTCATAAAAATCGAGCCGGGGCTCCATATCTTAGAGTGGCTGGAGAATTCCCAAAGTTGGAGGAGAGTTTTTATGCAAACCCCTATCCAGGATGCATTTGTGATAAAACCACAGAAAAGTCTCTGGTTAGAGAATACTTCATCGTCGAGAGGCCAACATCAGCTCCTGCAGGCTTCTCCAATGGCTCCCGCCGTTCCTCGCAACGCCTCCCTCTTCTATTGGGCCTTCGAGACAACAACCAAGCTCAAATCCATTCTAAGATCCAACGAGGAGAGGAGAAGGGAGAAGGGAGAAGGGTTTTAGTTATGGATACGAAGGAAGAGACAGGGAGCACACGTTGGGGTGCTTCACTTTTCCTCCAGACGACTGAAGATGTTGCAAGAGCTGTGGCTGCTGCCGCTGCTGCTGCCGCATCCGAGGCTCGCTCTCCTCGTCCTTCTGTTATATATTCTTCAAAAGGCGACGATACCAACAGTCCACTCCAGAGATTGCAGCGTCAAGTTAATAAAGTTCTTAAAGGCTTTTCTAGTCCTCCGCAAGTCAAAACTGCAGGAACCTACAATCCTGAAGTTCTCACTACCCAGAAGCGTCAATGGGCCAATTTCCAGCTGCAGTACTTGGACCATCGATCTCAGAAGGAGCCGACTAGGATTTTTGAGAGCATGGTTGTTGTTGGGCTGCACCCTAATTGTGACATTCAAGCACTTCAGAGGCAGTATGTTGCAAGGAAGTCTGAAGGTTCCGGGAGAGTGCGAACTGCTCTTAATAATAGTCAGAGTCAATCTCGGGTGGAACCACATCTTGAACCACAGGTCCTTTTTGTTTACCCTCCAGAGAAACAGTTACCGTGCAAGTACAAGGACCTTCTTTCATTCTGCTTTCCAGGAGGTGTGGAGGTTCACGCTGTCGAAAAAACTCCTTCCATGAGTGAGTTGAACGAGATTCTTCTTGGGCAGGAACACTTCAAGCAAAGTGACCTCTCATTTGTATTCCGCTTACAGGTTGCTGATGATTCAACATTGTACGGATGCTGTGTTTTAGTTGAAGAATTAGTGCAGAAACCATCTGGGTTGCTTTCTGCATCTGAGAAAGCACCTTCCTACTCATCCTTGAGCCGTTACATACTAACCACACGCAGATGCTATTGCATTCTATCTCGCTTGCCATTCTTCGAATTACATTTTGGTGTGTTGAATAGCATCTTCACCGAAGAAAGGCTGCAAAGATTAACAAAAGGTATTGGTATTTTGGATTTGGAATCCACAGAGAATTTGAGCAATGAAGAAGATTTGGCGGAAGACATCGGTTGCATGACTTTAGATCAGAGTGCAGCTGAAGACAGACACGAGGGAAAAGAGGAATATTCTCAAGGAATAATGAGTGATGAAACTCATCTTGAGCATCAAATGCACAATGGAAATTTTCAATGTCTAAAAAAGGGCATTAGTGATGATATAGTTGTCACACTCGATCGAGAACCAGAGGTCGTTACTGCCAAAACAGAATCTGTTACTGTACATAAGGAAAATCATGATATCGATGTTGATGATTTTACAAGAAACAATCAAGCGATTGATAGGCGTTTACCAAATGCGGTTCTTCCTCTCCTCCGTTATTATCAATATGAAAGCTCTGATTCGTCCTCAAGTTTTCAGGGGTCTCCGAGTGAAGACAGAAATTTCAGGAGTGATGCTGATGACACAGAGACAGAGGAGGCATCGTTTTCTGGCCAGGATGATTCCTCAGACCTACTTGAAATTCTTGAGTGGGCCAAGGAAAATAAGAATGGATCGTTACAAATCATATGCGAGTATTACCAGTTGCCTTACCCTGCTAGGGGCTGTTCTGTGAAGTTTCATCCTTTGGAGCACCTGCATCCCTTGGAGTATTATAGATCAGGTGAAACAGTTCTACATGTTGCTGGCTCGACCATTGATCCAAGGTCATGCAGTACAAGTCTTGAATTAGCAGAGGCACACGGCGCTCTCATGGTAGAGGAAGAAGCAAATGCCTTATCAGTATGGACTGTTGCAAGCATGTGTGGTTCTTTACGCCTCGAGCATATTTTATCAATTTTAGCTGGAGTGCTGCTGGAGAAGCAGATCGTGATCGTTTGTTCCAATCTGGGTATCCTATCTGCTTCAGTTTTATCGATTATCCCTATGATTCGTCCCTACCAGTGGCAAAGCTTGCTGATGCCAGTGTTACCAAATGATATGCTGGACTTTTTGGATGCCCCTGTTCCTTACATAGTCGGTGTGAAAAATAAAACCAGTGAAGTACAGTCGAAGCTGACCAATGCCATTTTGGTTGATGTGAACAAGAACCAGGTCAAGGCCTCAACAATACCTCAGCTGCCAAAACAAAAGGAGTTATTCTCATCGTTAAGACCGTATCACGCTGATCTAGTTGGAGAAAGTTATTTAGGGAGAAAGAGGCCAGTGCTTGAATGCACTGATGTGCAGGTTGAAGCCGCCAGGGGTTTCCTAAAAGTGCTAAGATTATACTTGGACTCTCTCTGTGCTAACCTCCGTTCACATACGATTACTAACGTACAATCGAATGACGATAAGGTTTCATTACTGTTGAAGGAGAGCTTCATTGAGTCGTTCCCAAGTCGTGATCGGCCATTTTTGAAGCTTTTTGTGGACACACAGTTGTTCTCTGTGCATACCGATCTCGTTCTCTCTTGCCTTTATCTTGTGGATTTCCGTAGAGATGTCAGAGACAAGGGTTGGCAGGCAGAACCGGAAGCTGCAGAGCGTTGCAGTCATAATATTATGAGCAGAGAGAGAAAGAAACAGAGGACTGAGGAAAAAACTCAAGATATGAGCGCACGAAACAGGCTCCCATTCACTGCAGCTCAATGGCAAGAGCTAGAACACCAAGCCCTCATCTTCAAGTACATGGTCTCCGGCATCCCTGTCCCTCCTGATCTGCTCTACGCCATGAAGAGATCCTCTTTGGACACTCCTTTCATTTCCAGGCTCTTTCCCCACCAATATCCAGACGTTGGATGGAACTTCGTGCAGATGGGTTCGGGGAGGAAAATCGACCCAGAGCCTGGAAGGTGCAGAAGAACAGACGGCAAAAAATGGAGATGCTCCAAAGAGGCATATCCAGATTCTAAATACTGTGAGAGACATATGCACAGAGGCAAAAACCGTTCAAGAAAGCCTGTGGAAGTTTTGAAACCAACAACAACAATAACTGCTCTAACCTCTAATCCATCTACCCCACCCATCTCCTCCATCACCCACAACTCCACCGCTTCACTCAGCACCAACTCATTTCCCTCTGAAATCCATACCCATTCTTGTTTCAATACTCCTCCTCCTCACCCTTTTCTCTATCAACATGGCTCCTTCTCTAGGCCCCCTGGTTCTGCCCATTTGCAGCACAACTCCAACCCATCCTTACTTCTGGACCCTCCTGCAGATTACAGGCCCCCTGGTTCTGCCCATTTGCAGCACAACTCCAACCCATCCTTACTTCTGGACCCTCCTGCAGATTACAGAAGAAATAGGTACGTTTATGCGGGGAAGGAAGATGTTGATAAGCATCCATTTCTATCGGAAGAACATTCTGGGAACATGAGAGGCTTCTCCGCTTCGTCTATGGAAGATCCCTGGCAGCTAACTCCTCTGACAATGAGTTGTTCTTCCTCATCCCCCAGACACAAGAACTGCTCAGCTTTACAAGGTGACTACTCTTCTTACTTGCAGCTGCAGAGCTTTGGCGGTTCCCCTAAGCAAGTGAAGCAAGACGAGCATTACTACGCGGTGGGAAAATATAATGAGATGCAGAGTAAGATGGACAGGGAGAAACCGGAGAAGACTATGCATCACTTCTTTGGTGAATGGTCTCCTGAAGACAGGGAGTCGTGGGTTGATTTGGATGATAAGTCATCCAATACTGGCGNACCGGAGAAGACTATGCATCACTTCTTTGGTGAATGGTCTCCTAAAGACAGGGAGTCGTGGGTTGATTTGGATGATAAGTCATCCAATACTGGCGCAGTTTCTGAAACTCGGCTTTCAATGTCTATTCTTAACTCGTCGCAGCATGACTTCTCCTCCATTTTCAGTTCCAATAAGCATAATGAAAACTGA 5835 45.42 MVPQRHHNSNDGVSQRVNSPRFSGPITRRAHSFKRNNNSNDINNGTNSNTIQNNGLSSHHEIDLPVNSPRSEAFRSTVLVDGFESGLERKTGQHVSQRTHGGVAAKSLLNPGFVSLDFRLREKRKLGHLMFMMFCGLCLFLGILKICMNGWFGSVIETNESHQDKPDSITSRNQVDQKSHNLRYREGESSMERTPMMESRVVGSQNGVEYSEIWTKPDSENFAPCIDEGRRHKKLDAKTNGYILVNANGGLNQMRFGICDMVVIAKVMKAVLVLPSLDHKSYWADESGFKDLFNWQHFLQTLENDVHIVETLPPAYAELVPFNKTPISWSKTGYYKAEVLPLLKQHKVMYFTHTDSRLANNGLSSSIQKLRCRVNFEALKYSAPIEELGNTLDMLAFTGCSHNLTTAEDDELRRMRYEVAHWKEKEINGTERRLLGGCPLTPRETSLLLRGLGFPSSTRIYLVAGEAYGNGSMQYLKDHFPNIYSHSTLSTEDELNPFKNHQNMLAGIDYVVALQSDVFIYTYDGNMAKAIQGHRRFEGFKKTISPDKENFVKLVDNLDEGKISWKKFSSKVKALHKNRAGAPYLRVAGEFPKLEESFYANPYPGCICDKTTEKSLVREYFIVERPTSAPAGFSNGSRRSSQRLPLLLGLRDNNQAQIHSKIQRGEEKGEGRRVLVMDTKEETGSTRWGASLFLQTTEDVARAVAAAAAAAASEARSPRPSVIYSSKGDDTNSPLQRLQRQVNKVLKGFSSPPQVKTAGTYNPEVLTTQKRQWANFQLQYLDHRSQKEPTRIFESMVVVGLHPNCDIQALQRQYVARKSEGSGRVRTALNNSQSQSRVEPHLEPQVLFVYPPEKQLPCKYKDLLSFCFPGGVEVHAVEKTPSMSELNEILLGQEHFKQSDLSFVFRLQVADDSTLYGCCVLVEELVQKPSGLLSASEKAPSYSSLSRYILTTRRCYCILSRLPFFELHFGVLNSIFTEERLQRLTKGIGILDLESTENLSNEEDLAEDIGCMTLDQSAAEDRHEGKEEYSQGIMSDETHLEHQMHNGNFQCLKKGISDDIVVTLDREPEVVTAKTESVTVHKENHDIDVDDFTRNNQAIDRRLPNAVLPLLRYYQYESSDSSSSFQGSPSEDRNFRSDADDTETEEASFSGQDDSSDLLEILEWAKENKNGSLQIICEYYQLPYPARGCSVKFHPLEHLHPLEYYRSGETVLHVAGSTIDPRSCSTSLELAEAHGALMVEEEANALSVWTVASMCGSLRLEHILSILAGVLLEKQIVIVCSNLGILSASVLSIIPMIRPYQWQSLLMPVLPNDMLDFLDAPVPYIVGVKNKTSEVQSKLTNAILVDVNKNQVKASTIPQLPKQKELFSSLRPYHADLVGESYLGRKRPVLECTDVQVEAARGFLKVLRLYLDSLCANLRSHTITNVQSNDDKVSLLLKESFIESFPSRDRPFLKLFVDTQLFSVHTDLVLSCLYLVDFRRDVRDKGWQAEPEAAERCSHNIMSRERKKQRTEEKTQDMSARNRLPFTAAQWQELEHQALIFKYMVSGIPVPPDLLYAMKRSSLDTPFISRLFPHQYPDVGWNFVQMGSGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVEVLKPTTTITALTSNPSTPPISSITHNSTASLSTNSFPSEIHTHSCFNTPPPHPFLYQHGSFSRPPGSAHLQHNSNPSLLLDPPADYRPPGSAHLQHNSNPSLLLDPPADYRRNRYVYAGKEDVDKHPFLSEEHSGNMRGFSASSMEDPWQLTPLTMSCSSSSPRHKNCSALQGDYSSYLQLQSFGGSPKQVKQDEHYYAVGKYNEMQSKMDREKPEKTMHHFFGEWSPEDRESWVDLDDKSSNTGXPEKTMHHFFGEWSPKDRESWVDLDDKSSNTGAVSETRLSMSILNSSQHDFSSIFSSNKHNEN 1944
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 9762295 9777327 - Cp4.1LG11g12030.1 Cpe11g01195 477989
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe11g01195 1944 PANTHER DENN (AEX-3) DOMAIN-CONTAINING PROTEIN 677 1472 - -
Cpe11g01195 1944 MobiDBLite consensus disorder prediction 1 67 - -
Cpe11g01195 1944 Pfam DENN (AEX-3) domain 1249 1350 IPR001194 -
Cpe11g01195 1944 Gene3D - 781 988 - -
Cpe11g01195 1944 CDD O-FucT_plant 242 543 IPR024709 -
Cpe11g01195 1944 MobiDBLite consensus disorder prediction 178 193 - -
Cpe11g01195 1944 ProSiteProfiles WRC domain profile. 1593 1637 IPR014977 -
Cpe11g01195 1944 SMART DENN_cls 951 1350 IPR001194 -
Cpe11g01195 1944 MobiDBLite consensus disorder prediction 1121 1152 - -
Cpe11g01195 1944 MobiDBLite consensus disorder prediction 162 197 - -
Cpe11g01195 1944 Pfam WRC 1594 1636 IPR014977 -
Cpe11g01195 1944 MobiDBLite consensus disorder prediction 30 61 - -
Cpe11g01195 1944 Gene3D - 1246 1412 IPR043153 -
Cpe11g01195 1944 MobiDBLite consensus disorder prediction 1700 1714 - -
Cpe11g01195 1944 ProSiteProfiles Tripartite DENN domain profile. 826 1481 IPR037516 -
Cpe11g01195 1944 ProSiteProfiles QLQ domain profile. 1525 1560 IPR014978 GO:0005524|GO:0005634|GO:0006355
Cpe11g01195 1944 SMART QLQ_2 1524 1560 IPR014978 GO:0005524|GO:0005634|GO:0006355
Cpe11g01195 1944 PANTHER SUPPRESSION OF TUMORIGENICITY 5 ST5 677 1472 - -
Cpe11g01195 1944 MobiDBLite consensus disorder prediction 1 22 - -
Cpe11g01195 1944 Pfam GDP-fucose protein O-fucosyltransferase 242 391 IPR019378 -
Cpe11g01195 1944 Pfam QLQ 1525 1556 IPR014978 GO:0005524|GO:0005634|GO:0006355
Cpe11g01195 1944 Pfam uDENN domain 844 921 IPR005113 -
Cpe11g01195 1944 MobiDBLite consensus disorder prediction 1691 1743 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g02530 Cpe-Chr1:20742957 Cpe11g01195 Cpe-Chr11:9762295 2.01E-141 dispersed
Cpe03g00075 Cpe-Chr3:408644 Cpe11g01195 Cpe-Chr11:9762295 1.21E-180 dispersed
Cpe07g01065 Cpe-Chr7:9480069 Cpe11g01195 Cpe-Chr11:9762295 7.64E-36 dispersed
Cpe08g01199 Cpe-Chr8:8804718 Cpe11g01195 Cpe-Chr11:9762295 5.57E-178 dispersed
Cpe11g01195 Cpe-Chr11:9762295 Cpe12g01166 Cpe-Chr12:9575888 2.54E-169 dispersed
Cpe19g00691 Cpe-Chr19:5432617 Cpe11g01195 Cpe-Chr11:9762295 1.61E-35 dispersed
Cpe07g01064 Cpe-Chr7:9471551 Cpe11g01195 Cpe-Chr11:9762295 0 transposed
Cpe11g01195 Cpe-Chr11:9762295 Cpe18g00326 Cpe-Chr18:4738529 4.46E-95 wgd
Cpe11g01195 Cpe-Chr11:9762295 Cpe02g01745 Cpe-Chr2:14257197 2.83E-62 wgd
Cpe11g01195 Cpe-Chr11:9762295 Cpe03g01046 Cpe-Chr3:8513101 4.88E-65 wgd
Cpe11g01195 Cpe-Chr11:9762295 Cpe04g01028 Cpe-Chr4:9123274 9.95E-98 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
50283 PF10250 O-FucT 9.60E-28 CL0113 Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe11g01195 - - cmax:111493653 1537.32