Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe11g01200 ATGGCCGCTGTTCGAATCGTGTTCCTGTTCCTCCTCCTGGGTGGTCTCCCCCTGTCGTGTCCCCTGTCCGAGAAGGAGGCCCTCCTCAAGCTGAAGCAATCCTTCACCCATTCCGGATCCCTCAACTCATGGAACGCGGACTCAGTCCCCTGCTCGGCTCGATGGACTGGCATCATCTGCAACAAGGGCGTCATCACCGGCCTACATCTCTCCGGCCTCCAACTCTCAGGCACCATTGACGTGGAAGCTCTCATCCAGCTCCCCCGCCTGAGAACCATCAGCTTAATCGACAACAAATTCACCGGCCCCATTCCTGAGTTCAACAAAATCGGGGTTCTCAAGGCGCTCCTCCTCACCCGGAACCAATTCTTCGGGGATATCCCGGACGATTTCTTTTCAACCCTCACCTCCCTCAAGAAGGTATATCTCTCCTCCAACAACTTCTCCGGGAACATTCCAAATTCTCTGGCCCAACTCTCCCATCTCCTCGAACTCCACCTCGACAGAAACCAATTCTCCGGCCCTCTCCCCAACCTCAAATACGCCTCCATTATAACCTCCCTCGATGTCTCCAACAACAACCTCCAGGGCCAAATACCCGACAGCCTCTCCAAATTCGACGCAAAGGCATTCGCCGGAAATGAAGGCCTCTGCGGGAACCCACTCCCCAAATCCTGCGAAGACAATGCTTCTCCTCCTCCTCCTCCTGGGGAGTCCCAAGCCAACATCTCCAAGTTGGTAGTGGCTTCATTGATAGCCGTGGTTGTGTTTCTGATGGTGTTTATATTTCTGAGCGCGTCGAAGCGCAGAGAGGACGAGTTCAGCATGCTTGGGAGGGATCGGGAGGAGGTGGTGGAGGTGCACGTGCCTGGTTCAGCCCAGGATAGGCAGTCGATTAGGAGAGGAGGTGGGGACTCCAGGAGAGGCTCCAAACAGGGGAAGGCAGGGATGACCGATCTTGTGGTGATCAACGACGAGAGGGGTACGTTTGGGATGGCGGATTTGATGAAGGCGGCAGCGGAGGTGCTGGGGAATGGCGGGTTGGGGTCGGCGTACAAGGCGGTCATGTCGAACGGGCTGTCAGTGGTGGTGAAGAGAATGAGAGAAATGAACAAAATAGGGAAGGATGGGTTCGATGCGGAGATGAGGCGGCTGGGAAGACTGCGGCATCAGAACATACTAACGCCTTTGGCGTATCATTATAGGAGAGAGGAGAAGCTGGTGGTGTCAGAGTACGTTCCGAAGGGCAGCCTGTTGTACGTGTTGCACGGTGACCGTGGAGCCTGCCATGCTGACCTTGACTGGGAGACCCGGCTAATAATTGTGAAGGGGATCGCAAGTGGTCTGGGGTTCCTCCATTCGGAATTCGCGACCTACGATCTGCCGCATGGGAATCTCAAGTCCAGCAACGTTCTTCTATGCGACGACTACGAGCCACTTCTGAGCGACTACGCGTTTCATCCGCTCATCAATCCCAGCAATGCGAGCCAGGCAATGTTCGCCTACAAAGCCCCCGAGTACGCCCAGAACCAGGAAGTTTCTCCCAAGTCTGATGTTTATTGCCTTGGAATTATCATTCTGGAAATAATGACCAGCAAGTTTCCTTCTCAATATCTAACCAATGGCAAGGGTGGCACCGATGTGGTGCAGTGGGTCTCCTCCGCAGTAGCCGAGAAGAGGGAGGCGGAACTCATCGACCCTGAGATTGCAAACGACGCCCCCGACGAACTGGATCGAATGGTCCAGCTACTCACAATCGGCGCGGATTGCACTCACGCCACTCCTCAGCAACGGCCGGATATGAAGGAAGCCATTAGGAGAATAGAAGAGATTTGA 1836 54.96 MAAVRIVFLFLLLGGLPLSCPLSEKEALLKLKQSFTHSGSLNSWNADSVPCSARWTGIICNKGVITGLHLSGLQLSGTIDVEALIQLPRLRTISLIDNKFTGPIPEFNKIGVLKALLLTRNQFFGDIPDDFFSTLTSLKKVYLSSNNFSGNIPNSLAQLSHLLELHLDRNQFSGPLPNLKYASIITSLDVSNNNLQGQIPDSLSKFDAKAFAGNEGLCGNPLPKSCEDNASPPPPPGESQANISKLVVASLIAVVVFLMVFIFLSASKRREDEFSMLGRDREEVVEVHVPGSAQDRQSIRRGGGDSRRGSKQGKAGMTDLVVINDERGTFGMADLMKAAAEVLGNGGLGSAYKAVMSNGLSVVVKRMREMNKIGKDGFDAEMRRLGRLRHQNILTPLAYHYRREEKLVVSEYVPKGSLLYVLHGDRGACHADLDWETRLIIVKGIASGLGFLHSEFATYDLPHGNLKSSNVLLCDDYEPLLSDYAFHPLINPSNASQAMFAYKAPEYAQNQEVSPKSDVYCLGIIILEIMTSKFPSQYLTNGKGGTDVVQWVSSAVAEKREAELIDPEIANDAPDELDRMVQLLTIGADCTHATPQQRPDMKEAIRRIEEI 611
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 9792792 9794706 - Cp4.1LG11g11960.1 Cpe11g01200 477994
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe11g01200 611 Pfam Protein kinase domain 341 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe11g01200 611 Gene3D Ribonuclease Inhibitor 22 180 IPR032675 -
Cpe11g01200 611 SUPERFAMILY Protein kinase-like (PK-like) 341 608 IPR011009 -
Cpe11g01200 611 MobiDBLite consensus disorder prediction 290 315 - -
Cpe11g01200 611 Pfam Leucine rich repeat N-terminal domain 23 61 IPR013210 -
Cpe11g01200 611 Gene3D Phosphorylase Kinase; domain 1 306 412 - -
Cpe11g01200 611 SUPERFAMILY L domain-like 19 206 - -
Cpe11g01200 611 CDD STKc_IRAK 343 611 - -
Cpe11g01200 611 Pfam Leucine rich repeat 113 172 IPR001611 GO:0005515
Cpe11g01200 611 Gene3D Transferase(Phosphotransferase) domain 1 413 611 - -
Cpe11g01200 611 ProSiteProfiles Protein kinase domain profile. 337 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe11g01200 611 PANTHER LRR RECEPTOR-LIKE KINASE 4 611 - -
Cpe11g01200 611 Gene3D Ribonuclease Inhibitor 181 229 IPR032675 -
Cpe11g01200 611 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 4 611 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe07g01079 Cpe11g01200 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe11g01200 Cpe-Chr11:9792792 Cpe18g00665 Cpe-Chr18:6710715 5.61E-140 dispersed
Cpe11g01200 Cpe-Chr11:9792792 Cpe02g01768 Cpe-Chr2:14373468 2.84E-146 wgd
Cpe11g01200 Cpe-Chr11:9792792 Cpe07g01079 Cpe-Chr7:9550744 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62734 PF00069 Pkinase 4.30E-26 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe11g01200 - - csv:101215919 1011.13