Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe12g00015 GTTACGTGGGTGGAACATGCAGAGTACGATGATAGCCAAGTCCACCAGCTCTACCGTCCCCTACTCAGCTCCGGCATGGGCTTCGGAGCACAACGGTGGGTTGCCACCCTTCAACGGCAATGTGAATGCCTCGCCATTCTCATGTCATCGGCTGCGCCAATACGAGACCACACCGCCATAACTGCAGGGGGGAGGCGGAGCATGCTGAAGCTAGCGCAACGAATGACAGCCAACTTCTGCGCAGGCGTGTGTGCATCCACAGTGCACAAATGGAACAAGCTGAATGCCGGGAGCGTCGATGAGGACGTCCGAGTCATGACACGAAAGAGCGTGGACGATCCTGGGGAACCTCCAGGCATTGTGTTGAGTGCAGCTACGTCGGTATGGCTCCCGGTATCGCCCCAACGACTTTTTGATTTCCTCCGTGACGAGCGGCTGAGGAGTGAATGGGACATCCTATCCAACGGCGGCCCCATGCAGGAGATGGCTCATATCGCCAAAGGCCAAGATCATGGCAACTGCGTCTCTCTATTAAGAGCCAGCGCTATGAATGCGAACCAGACCAGTATGTTGATTCTACAAGAGACATGCATAGACGCGGCCGGCTCCCTTGTGGTCTACGCGCCGGTCGACATCCCGGCAATGCACGTGGTGATGAATGGCGGCGATTCGGCGTACGTGGCGCTTTTGCCTTCAGGGTTTGCGATTGTGGCTGACGGCGCGGTGACAGGTGGGAGGAGTCCGAGTGGCGGGGAGGGAGGGCGGCAGGGTGAGAGAGGGACAGGCGGGGGGTCCCTTCTCACCGTGGCATTTCAAATCCTGGTGAATAGCCTCCCTACAGCGAAGCTCACCGTGGAATCGGTTGAAACAGTCAACAATCTCATCTCTTGCACCGTCCAGAAGATCAAGGCCGCTCTTCAATGCGAAACCTGA 933 57.56 VTWVEHAEYDDSQVHQLYRPLLSSGMGFGAQRWVATLQRQCECLAILMSSAAPIRDHTAITAGGRRSMLKLAQRMTANFCAGVCASTVHKWNKLNAGSVDEDVRVMTRKSVDDPGEPPGIVLSAATSVWLPVSPQRLFDFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSLLRASAMNANQTSMLILQETCIDAAGSLVVYAPVDIPAMHVVMNGGDSAYVALLPSGFAIVADGAVTGGRSPSGGEGGRQGERGTGGGSLLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAALQCET 310
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 67744 69300 + Cp4.1LG12g00020.1 Cpe12g00015 478012
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe12g00015 310 ProSiteProfiles START domain profile. 1 46 IPR002913 GO:0008289
Cpe12g00015 310 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 1 308 IPR042160 -
Cpe12g00015 310 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HDG1 1 308 - -
Cpe12g00015 310 SUPERFAMILY Bet v1-like 71 303 - -
Cpe12g00015 310 Pfam START domain 1 43 IPR002913 GO:0008289
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe03g01710 Cpe12g00015 CCT
Cpe03g01710 Cpe12g00015 ECH
Cpe12g00015 Cpe17g00350 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g01710 Cpe-Chr3:12998014 Cpe12g00015 Cpe-Chr12:67744 1.81E-155 dispersed
Cpe12g00015 Cpe-Chr12:67744 Cpe14g00118 Cpe-Chr14:638199 2.18E-150 dispersed
Cpe12g00015 Cpe-Chr12:67744 Cpe17g00350 Cpe-Chr17:2471558 1.18E-179 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe12g00015 K09338 - csv:101222248 563.918