Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe12g00049 | ATGGCTACTTTAAACTTAGGCTCAGCTTCTCACTTTGTTGACCAGCTTCAACAACGCCCTGATCTCCACCTAGATTCGCCGCCCAGCTCCGATCATGTCACTAATCTCAACCACTTCAACGGCAGTGGCGGCTCCGGTGGTAGCGGAGATGCTATGGTTCGTCGACCGAGGGGTCGCCCAGCCGGGTCCAAGAACAAGCCAAAGCCACCCGTGATCATCACGCGCGAGAGCGCTAATACCCTCCGAGCTCATATCTTGGAAATCGGTAGCGGATATGATGTGTTCGAGGCTGTGGCTGGCTATGCGCGACGGCGACAACGAGGGATCTGTGTGTTGAGTGGAAGTGGGATAGTGAATAATGTTAGCTTACGACAACCGGCTGCGGCTGGATCCGTGTTGACGTTGCAAGGGAGGTTTGAGATTTTGTCCCTGTCGGGATCGTTCTTACCACCACCTGCTCCACCAGGTGCTACTAGTCTTACGATTTTCTTGGCCGGAGGTCAAGGACAAGTGGTCGGAGGGAATGTCGTGGGAGCTTTGATTGCGTCGGGGCCTGTCATCGTTATAGCATCGTCGTTCAGTAACGTTGCATACGAGAGGCTACCGTTGGATGAAGAAGAATTGTCGATGCCTGCAGCTGGTGGGGACGGAGATGGAGGCGAGGGCGGGGGCGGTGATGGCCACGACAACCCTTTTCCCGACGGATCTTCGGGTTTGCCCTTTCTAAATCTGCCTATGAATATGCCAAATCAGAATCAATTTTTTGGTTGA | 771 | 53.83 | MATLNLGSASHFVDQLQQRPDLHLDSPPSSDHVTNLNHFNGSGGSGGSGDAMVRRPRGRPAGSKNKPKPPVIITRESANTLRAHILEIGSGYDVFEAVAGYARRRQRGICVLSGSGIVNNVSLRQPAAAGSVLTLQGRFEILSLSGSFLPPPAPPGATSLTIFLAGGQGQVVGGNVVGALIASGPVIVIASSFSNVAYERLPLDEEELSMPAAGGDGDGGEGGGGDGHDNPFPDGSSGLPFLNLPMNMPNQNQFFG | 256 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 266568 | 267479 | + | Cp4.1LG12g00380.1 | Cpe12g00049 | 478046 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe12g00049 | 256 | MobiDBLite | consensus disorder prediction | 22 | 44 | - | - | |
Cpe12g00049 | 256 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 82 | 195 | IPR005175 | - | |
Cpe12g00049 | 256 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 78 | 210 | - | - | |
Cpe12g00049 | 256 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN | 1 | 253 | - | - | |
Cpe12g00049 | 256 | Gene3D | - | 81 | 211 | - | - | |
Cpe12g00049 | 256 | MobiDBLite | consensus disorder prediction | 20 | 71 | - | - | |
Cpe12g00049 | 256 | MobiDBLite | consensus disorder prediction | 209 | 244 | - | - | |
Cpe12g00049 | 256 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 | 1 | 253 | IPR014476 | GO:0003680 | |
Cpe12g00049 | 256 | CDD | DUF296 | 82 | 165 | IPR005175 | - | |
Cpe12g00049 | 256 | ProSiteProfiles | PPC domain profile profile. | 78 | 214 | IPR005175 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe05g00183 | Cpe-Chr5:963252 | Cpe12g00049 | Cpe-Chr12:266568 | 1.28E-85 | dispersed | |
Cpe08g00854 | Cpe-Chr8:6759896 | Cpe12g00049 | Cpe-Chr12:266568 | 9.75E-84 | dispersed | |
Cpe12g00049 | Cpe-Chr12:266568 | Cpe15g00220 | Cpe-Chr15:1903902 | 6.70E-89 | dispersed | |
Cpe12g00049 | Cpe-Chr12:266568 | Cpe17g00234 | Cpe-Chr17:1518658 | 2.33E-59 | wgd | |
Cpe12g00049 | Cpe-Chr12:266568 | Cpe17g00291 | Cpe-Chr17:1974212 | 4.16E-129 | wgd | |
Cpe12g00049 | Cpe-Chr12:266568 | Cpe03g01656 | Cpe-Chr3:12655423 | 9.83E-103 | wgd | |
Cpe12g00049 | Cpe-Chr12:266568 | Cpe08g00456 | Cpe-Chr8:2934971 | 3.14E-55 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe12g00049 | - | - | csv:101203160 | 419.083 |