Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cpe12g00095 | ATGGGTGGCCACGGAAAGGTCTTCACATTGGCTGAAGTCTCTCAGCACAATACCCGCCAGGACTGTTGGTTGATCATCAATGGCAAGGTTTACAATGTAACCGAGTTCTTGGAAGACCATCCCGGTGGCGACGAGGTGTTGTTGTCTGGCACAGGTAAGGATGCAACAGATGATTTCGAAGATGTGGGTCATAGTGAGAGTGCAAGAGAAACAATGAACAAATACTATGTTGGAGACATCGACATCTCGACAATCCCTGAACGTTTGACATACACAGCTTCCAAGCAGCCTCACGACATTCAGGATAAGACGACCGAGTTCATCGTCAAGCTTCTCCAGTTCCTGGTCCCTCTCGCAATCTTGGGTCTGGCAGTCGGTATCCGCTTTTATAGCAAATCAACCTGA | 405 | 48.4 | MGGHGKVFTLAEVSQHNTRQDCWLIINGKVYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESARETMNKYYVGDIDISTIPERLTYTASKQPHDIQDKTTEFIVKLLQFLVPLAILGLAVGIRFYSKST | 134 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 12 | 569324 | 572001 | + | Cp4.1LG12g00830.1 | Cpe12g00095 | 478092 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cpe12g00095 | 134 | Gene3D | - | 3 | 83 | IPR036400 | - | |
| Cpe12g00095 | 134 | ProSitePatterns | Cytochrome b5 family, heme-binding domain signature. | 36 | 43 | IPR018506 | GO:0020037 | |
| Cpe12g00095 | 134 | PRINTS | Cytochrome B5 signature | 30 | 40 | IPR001199 | - | |
| Cpe12g00095 | 134 | PRINTS | Cytochrome B5 signature | 40 | 54 | IPR001199 | - | |
| Cpe12g00095 | 134 | PRINTS | Cytochrome B5 signature | 55 | 62 | IPR001199 | - | |
| Cpe12g00095 | 134 | PRINTS | Cytochrome B5 signature | 68 | 80 | IPR001199 | - | |
| Cpe12g00095 | 134 | PANTHER | CYTOCHROME B5 | 1 | 132 | - | - | |
| Cpe12g00095 | 134 | ProSiteProfiles | Cytochrome b5 family, heme-binding domain profile. | 5 | 81 | IPR001199 | - | |
| Cpe12g00095 | 134 | SUPERFAMILY | Cytochrome b5-like heme/steroid binding domain | 6 | 86 | IPR036400 | - | |
| Cpe12g00095 | 134 | PANTHER | BNAC04G43300D PROTEIN | 1 | 132 | - | - | |
| Cpe12g00095 | 134 | Pfam | Cytochrome b5-like Heme/Steroid binding domain | 9 | 80 | IPR001199 | - | |
| Cpe12g00095 | 134 | SMART | Cyt_b5_2 | 8 | 81 | IPR001199 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cpe12g00095 | Cpe-Chr12:569324 | Cpe13g00327 | Cpe-Chr13:2946237 | 7.50E-56 | dispersed | |
| Cpe12g00095 | Cpe-Chr12:569324 | Cpe15g00137 | Cpe-Chr15:1084099 | 2.35E-59 | wgd | |
| Cpe12g00095 | Cpe-Chr12:569324 | Cpe03g01589 | Cpe-Chr3:12270252 | 2.46E-68 | wgd | |
| Cpe12g00095 | Cpe-Chr12:569324 | Cpe05g00119 | Cpe-Chr5:621104 | 6.87E-55 | wgd | |
| Cpe12g00095 | Cpe-Chr12:569324 | Cpe08g00396 | Cpe-Chr8:2509521 | 7.17E-72 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cpe12g00095 | K23490 | - | csv:101213506 | 245.358 |