Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe12g00123 ATGGCCGGTGAGGTAGCGGTGGAGGGTCCTGCGGCGGCGACAGAAGTAGGCGATTCCATTGAGCAGTCCCATATGTTGGAGAGAAAATGGACCTTTTGGTTCGATAACCAGTCGAGGCCGAAGCAAGGTGCTGAATGGGGCAGCTCTCTGCGCAAGGTCTATACCTTCGACACTGTTGAAGAATTTTGGTGTTTTTACGATCAGATATTGAAGCCGAGCAAGTTGCCGGCTAATGCAGATTTTCACTTGTTCAAAGCTGGAGTTGAACCGAAATGGGAAGATCCTGAGTGTGCTAATGGAGGAAAATGGACTGTCACGAGCAGTAGAAAGACTAACCTCGATACCATGTGGCTGGAAACGTTGATGGCATTGATTGGGGAACAATTTGAGGAGTCTGATGAGATCTGTGGCGTAGTTGCCAGTGTGCGCCAGAGGCAGGACAAGCTTGCACTGTGGACCAAGACAGCAACAAATGAGGCTGCTCAGATGAGCATCGGTAGGAAATGGAAGGAGATCATCGACGTTACCGACAAGATTTCCTTCAGCTTTCATGAGGATCTGAGAAGGGAAAAGTCGGCGAAATCGTCTCGGTACAGTGTCTGA 603 49.59 MAGEVAVEGPAAATEVGDSIEQSHMLERKWTFWFDNQSRPKQGAEWGSSLRKVYTFDTVEEFWCFYDQILKPSKLPANADFHLFKAGVEPKWEDPECANGGKWTVTSSRKTNLDTMWLETLMALIGEQFEESDEICGVVASVRQRQDKLALWTKTATNEAAQMSIGRKWKEIIDVTDKISFSFHEDLRREKSAKSSRYSV 200
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 772693 777910 + Cp4.1LG12g01110.1 Cpe12g00123 478120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe12g00123 200 PANTHER BNAA08G29940D PROTEIN 12 191 - -
Cpe12g00123 200 Gene3D RNA Cap, Translation Initiation Factor Eif4e 15 200 IPR023398 -
Cpe12g00123 200 SUPERFAMILY eIF4e-like 20 192 IPR023398 -
Cpe12g00123 200 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 12 191 IPR001040 GO:0003723|GO:0003743|GO:0006413
Cpe12g00123 200 ProSitePatterns Eukaryotic initiation factor 4E signature. 80 103 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
Cpe12g00123 200 Pfam Eukaryotic initiation factor 4E 26 181 IPR001040 GO:0003723|GO:0003743|GO:0006413
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe12g00123 Cpe-Chr12:772693 Cpe20g00489 Cpe-Chr20:2828156 4.54E-73 dispersed
Cpe12g00123 Cpe-Chr12:772693 Cpe17g00212 Cpe-Chr17:1370438 1.14E-128 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe12g00123 K03259 - csv:101208495 362.844