Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe12g00133 ATGCCGTTTCTTGGATTCTTTTGCTGGTCGCTGCTGCAGCTTTCTCTCTCTCTCTCTCTCTCATGGCGGCAGCCATTAAAGCTCATCTTTAGAGCTAAATGCTCTTTCTTCTTTAGGTTTCTTCTTCAACTTTTTACTTGGAGTTTCGAGCTCATATTTTGGTGGCACGAACCTGCTTATCTGTCTTTCGCCATGAAGTCTTCGACTAGGCTTGATTCGGCTACTTTTCAGCTCACACCTACTCGAACCAGGTGTGATTTGATTCTATCTGCGAATGGAAAGTCTGAGAAGATAGCTTCGGGTTTGTTGAATCCTTTTCTTGCCCATTTGAAGACTGCACAAGAACAGATGGCCAGAGGTGGTTATTCCATTATTCTTGAGCCAGACCCTCGCAGTGATAGAACATGGTTCACAAAGGGTACCATGGAAAGGTTTGTCCGATTTGTAAGCACCCCTGAAATCTTGGAACGGGTGTACACTATTGAATCAGAGATCTTACAAATTGAGGAGGCAATCGTGATTCAGGGCAACAGTGACATGGGACCAAATGTTGTAGATGACAAGCAAGGAAAGCCTACAAAGCCTACCGAAAGCGCCACCGAAGCAAGCAAGCCTCTTCTGGATGGTAATGAGGAGAAAGCCATTGTTCTATACAAGCCTGATGCAAAATCATTGGAGGCCAATGGACATATGATGTCAGAGGAGAACTCAAAAGCCCAGCTTCTTAAAGTCTTGGAGACACGCAAAACTATGCTGCAAAAGGAGCAAGGAATGGCTTTTGCTCGAGCTGTTGCTGCTGGTTTTGACATTGATCGGTTGTCACCCTTGATATCATTTGCCAACAGCTTTGGAGCCTCACGATTGATGGATGCATGCATAAAATTCAAAGAACTGTGGAAAAGAAAGCATGAAAGTGGCCAATGGCTCGAAATTGAAGCAGCAGAAGCACTGTCCAGCCGAGCAGACTTTTCCCCTTCCATGAATGCATCAGGCATTATACTTACAAATATGACTGACAAGCAGACAGAATCTAGAGAAGCATTGTCTGAATCTCAAAGCGAACCATCTCCGACAAATAAGGGGAATGCAAGTGCAGATGGAAATACACGGACACCTATGATGTACCAGTCACCACCAGGCCACCAGGAGTATCTTCAAGGGCAGTATCCTCATCATGTCTACCCTCCCTGGCCCATCAATTCTCCTCCAGGTGCATTACCTGTCTTTCAAGGATACCCCATGCAAGGAATGCCTTACTATCAGAACTATGCAGGGAGTAGCCCATTCTTTCATCCACATTATCCAGTAACAGAGGATTCTCGCCCGGGTGATGGTAAAAAAATGGGAGGCAAACGGCACTCCATGGATAGTGGAGATAACTCGATGGAACCAGAGGCCTGGGAGTCGAATGCTTCAGAAACAAGAACACCAGATGATGCAGAATCAGAGCAAGAAGCTTCAGAAGATCTAAGAAAAGCTGGTCGATCAGGTAAAAAGAAGTCGAGTGTGGTTGTCATCCGCAACATCAACTACATTGCATCGAAGAGGCACAACTCATCAGGCAGTGAAACAGATTCACGGTCTGATAGTGAAAGTGGTGAAGATGGAGATTCACAGGCTATTAATCCGGAAATTAAACACAAGAAATCACCTAGATCGTCAAGGAGCAAAGGAAAACATCTAAATTTTGGAGATCAATCAAATACTTCTGCAAAAACTGTTTCACCAGAAGCAGATGGACATTGGCAGGCATTCCAAAACCTTTTACTTCGGGATGCTGATGGGGATAAACATCATGCTGATCAAAGCCTGTTTACCTTGGAAAGGGAGACGAAGCAGAAAAGGCAACAAAATAAAGTTGGTGATGATCCATTGATTGCTCAAGGATGGAACAAAAATGAAATCCGAGAAAATGGTGCTACAGACATTGATCGAGTTGGTGGAAGAATCAACCGCATGTCAAGGGCATCAAATGATGAATTATTAACTTCCAGAGGAGATAGTCTATCTGGAGATGGTCATTTGAACGTGCAGGCTACAGAACTAGATGGAGGAAGAAATGGCTACAGGAGGCCTGGTAGTGATGATTTTATAGTTTATGGACAAAAAGGTCAAACTCATTCTAACGCTTACTCGGATCCATTAGCTGCAGGTGGCTTTGATAATACAAAAATGAGTTATGATAAAAGTTCGTCAAATAATTTGGATGGTGATTCTTACATAGTTACATTAAGATCGACATCAATGGATGCAGTAGGAAAGGAAGGTAGAAGTGCTGTTGACATGGATTCTGAGTTTCCATCTTCAAATCGTAAGGCAGAAAACTTGTCCAATAGAGTTGCTGACTACGAGCCAGATGTACTGAATCTGGTGCCAAAGCGTGAAACAGAAAACGAACCTGCTGGCTATGATCCTGCTTCAGAATATGAAATGCAAGTCCATGCTGGACGTGTACCAGCTGTGAATAAAAAGAAGGAAATGGTGACTGATGTTAAACAAGGGACTAAAAGGTTGGACAATGATCGAAAGCCAAAAGTTACTCCTGACAGAAAAACTGGGGGGCCAATAAGGAAGGGAAAGCCATCTAAGTTGAGTCCTTTAGATGAAGCACGAGCACGTGCTGAAAAGCTAAGAAGTTATAAAGCTGATCTCCAGAAATTGAAGAAGGAGAAGGAGGAGGAGGCAATAAAAAGAATAGAAACTTTAAAGCTAGAGAGGCAGAAGAGAATTGCAGCAAGAGGTAACAACAGCAATACTGCTGCTCAGTCATCATTGCCCTCTCAACAAACTAGAAAGCTCCTGCCAACAAAAATGTCACCGAGCTCTCAGAAAGGGTCAAAATTTAGTGATTCAGATCCAGGACCATCATCTCCTCTGCAAAGGTTCTCCATCAGAACGGCTTCAATTGGTTCCAATGATTCCAACAGTGCTGCAAAACCCAGCAGATTGAATGGTATAAATCACTCAGCTGGAAACCGGTTAAGTCAATCTGTACCTTCATTAAATAAACTAAAGAAAGAGAACAGTGAGGCTACACATGATAAAAAAGTATCCATGGCTCGAATTAGAAGATTATCAGAGCCCAAAATGAGTATCAGCAATCATTCTTCTTCTTTCAAGACGCGGAGCACTGAGCCAGCTTTGAAGGCAAAACTAACAAATGAGACTGAGAGCAAAAAGAAGATATCTAATGAGACTGACAGCAAAAAGAAGGTATCTAATGAGAATGATAGCAAAAGGAAGATATCTAATGAGACTGACAGCAAAAAGAAGGTAAATGAGACTGATAGCAAAAAGAAGATATCTGCTATAATGAATTTGGATAAGAGCAAGGCTGCAACTCTTCCGGAACTTAAAATTAGAACGCCCAAGGGACCTGGTGCTACAATTGGCAACTCATTAGCAAAAGAAATGACGCAGAGCGTTAATTGTTCTTCAGTTTCTGATGTTGCTTGTGCTTCCATGGAAAAAATCACTGCCAAAGTCTCACATCATAATGAACTGGATGACAACCCTGTTGTTGAGAAGACTGTTGTAATGCTTGAATGTGAGAAGCCCTCCATCCGTACAGGTCCTGTTTCTCAAGACAATCTTTGCGACCGAAGGACATATAGCAAGCACAAAATGGAGGGAAAAACTGATATCCCATCAGAATATTCTGCCACCAATGCTCTTAATCCCCAAATTAAAGTGTCCGGTGTTAATAGAGAACCCATCAAGCGCCAATCACAGGGTCAGTTGAGTTCTCGTGAGGTGACGGTGAATGGTGCAGATCAGGAAGCACAAAACTTCTCATCTCCTACTACGACCGAAAAATTGTATAAAGCTCCACATGCTCGAGTTTCGTCTTTTGAAGATCCTTGCACACGCATTTCGGAGCATGGAAAAGCAACCCCATCAAATTTGGAGAGTGCAGCATCAGGCACTGAAACGGCTAAAGCTTATGTTCCTGATCATGGAAACGCACTATTGGAAAAGATTCCTGAAGCATTAGAGAAACCCGAGGCAAAAAAATCATCTAAAGGACTTAGACTGTTTCTGAAGTTTGGAAGAAAGAATCAAAGCCCAGCTACAGATGAGCATAATGATGAATCAGATAATACCAGCGCAACTGGTTCTGAAGCCAATGATGTTGGGACAAATACCACTCCGCACAATGAAGCAGTTCCTACATTGAAAAATCTGATTTCTCAAGATGAAACCCCCACTGCCAGCAAAACTCAGAAGTCTTCTCGTGCATTTTCCTTGCTATCACCTTTCCGAAGCAAGAACAGTGAAAAGAGAACTGCATAA 4293 42.77 MPFLGFFCWSLLQLSLSLSLSWRQPLKLIFRAKCSFFFRFLLQLFTWSFELIFWWHEPAYLSFAMKSSTRLDSATFQLTPTRTRCDLILSANGKSEKIASGLLNPFLAHLKTAQEQMARGGYSIILEPDPRSDRTWFTKGTMERFVRFVSTPEILERVYTIESEILQIEEAIVIQGNSDMGPNVVDDKQGKPTKPTESATEASKPLLDGNEEKAIVLYKPDAKSLEANGHMMSEENSKAQLLKVLETRKTMLQKEQGMAFARAVAAGFDIDRLSPLISFANSFGASRLMDACIKFKELWKRKHESGQWLEIEAAEALSSRADFSPSMNASGIILTNMTDKQTESREALSESQSEPSPTNKGNASADGNTRTPMMYQSPPGHQEYLQGQYPHHVYPPWPINSPPGALPVFQGYPMQGMPYYQNYAGSSPFFHPHYPVTEDSRPGDGKKMGGKRHSMDSGDNSMEPEAWESNASETRTPDDAESEQEASEDLRKAGRSGKKKSSVVVIRNINYIASKRHNSSGSETDSRSDSESGEDGDSQAINPEIKHKKSPRSSRSKGKHLNFGDQSNTSAKTVSPEADGHWQAFQNLLLRDADGDKHHADQSLFTLERETKQKRQQNKVGDDPLIAQGWNKNEIRENGATDIDRVGGRINRMSRASNDELLTSRGDSLSGDGHLNVQATELDGGRNGYRRPGSDDFIVYGQKGQTHSNAYSDPLAAGGFDNTKMSYDKSSSNNLDGDSYIVTLRSTSMDAVGKEGRSAVDMDSEFPSSNRKAENLSNRVADYEPDVLNLVPKRETENEPAGYDPASEYEMQVHAGRVPAVNKKKEMVTDVKQGTKRLDNDRKPKVTPDRKTGGPIRKGKPSKLSPLDEARARAEKLRSYKADLQKLKKEKEEEAIKRIETLKLERQKRIAARGNNSNTAAQSSLPSQQTRKLLPTKMSPSSQKGSKFSDSDPGPSSPLQRFSIRTASIGSNDSNSAAKPSRLNGINHSAGNRLSQSVPSLNKLKKENSEATHDKKVSMARIRRLSEPKMSISNHSSSFKTRSTEPALKAKLTNETESKKKISNETDSKKKVSNENDSKRKISNETDSKKKVNETDSKKKISAIMNLDKSKAATLPELKIRTPKGPGATIGNSLAKEMTQSVNCSSVSDVACASMEKITAKVSHHNELDDNPVVEKTVVMLECEKPSIRTGPVSQDNLCDRRTYSKHKMEGKTDIPSEYSATNALNPQIKVSGVNREPIKRQSQGQLSSREVTVNGADQEAQNFSSPTTTEKLYKAPHARVSSFEDPCTRISEHGKATPSNLESAASGTETAKAYVPDHGNALLEKIPEALEKPEAKKSSKGLRLFLKFGRKNQSPATDEHNDESDNTSATGSEANDVGTNTTPHNEAVPTLKNLISQDETPTASKTQKSSRAFSLLSPFRSKNSEKRTA 1430
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 836048 845333 - Cp4.1LG12g01320.1 Cpe12g00133 478130

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cpe12g00133 1430 MobiDBLite consensus disorder prediction 1368 1424 - -
Cpe12g00133 1430 MobiDBLite consensus disorder prediction 911 1005 - -
Cpe12g00133 1430 MobiDBLite consensus disorder prediction 1349 1430 - -
Cpe12g00133 1430 MobiDBLite consensus disorder prediction 339 376 - -
Cpe12g00133 1430 MobiDBLite consensus disorder prediction 1290 1310 - -
Cpe12g00133 1430 MobiDBLite consensus disorder prediction 1052 1097 - -
Cpe12g00133 1430 MobiDBLite consensus disorder prediction 816 872 - -
Cpe12g00133 1430 MobiDBLite consensus disorder prediction 819 872 - -
Cpe12g00133 1430 MobiDBLite consensus disorder prediction 560 576 - -
Cpe12g00133 1430 PANTHER COP1-INTERACTING PROTEIN-RELATED 1070 1425 - -
Cpe12g00133 1430 PANTHER COP1-INTERACTING PROTEIN-RELATED 65 1069 - -
Cpe12g00133 1430 Coils Coil 867 897 - -
Cpe12g00133 1430 MobiDBLite consensus disorder prediction 179 205 - -
Cpe12g00133 1430 MobiDBLite consensus disorder prediction 1029 1051 - -
Cpe12g00133 1430 MobiDBLite consensus disorder prediction 1294 1308 - -
Cpe12g00133 1430 MobiDBLite consensus disorder prediction 339 387 - -
Cpe12g00133 1430 MobiDBLite consensus disorder prediction 434 579 - -
Cpe12g00133 1430 MobiDBLite consensus disorder prediction 900 1097 - -
Cpe12g00133 1430 MobiDBLite consensus disorder prediction 601 619 - -
Cpe12g00133 1430 PANTHER COP1-INTERACTING PROTEIN-LIKE PROTEIN 1070 1425 - -
Cpe12g00133 1430 PANTHER COP1-INTERACTING PROTEIN-LIKE PROTEIN 65 1069 - -
Cpe12g00133 1430 MobiDBLite consensus disorder prediction 601 626 - -
Cpe12g00133 1430 MobiDBLite consensus disorder prediction 520 549 - -
Cpe12g00133 1430 MobiDBLite consensus disorder prediction 1006 1023 - -
Cpe12g00133 1430 MobiDBLite consensus disorder prediction 437 459 - -
Cpe12g00133 1430 MobiDBLite consensus disorder prediction 472 496 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe12g00133 - - - cmax:111499086 2569.65
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Cpe12g00133 Cpe17g00200 CST
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g00714 Cpe-Chr2:4513077 Cpe12g00133 Cpe-Chr12:836048 4.66E-89 dispersed
Cpe06g00706 Cpe-Chr6:4386889 Cpe12g00133 Cpe-Chr12:836048 2.57E-85 dispersed
Cpe12g00133 Cpe-Chr12:836048 Cpe17g00440 Cpe-Chr17:3278806 5.34E-36 dispersed
Cpe12g00133 Cpe-Chr12:836048 Cpe17g00200 Cpe-Chr17:1297414 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g727 Blo01g00089 Blo12g00369 Bda03g00841 Bda08g00276 . . Bma04g00739 . Cmo08g01052 Cmo17g00154 . . . . . . . . . . . . . . Cla06g00675 Cam06g0725 Cec06g0732 Cco06g0741 Clacu06g0716 Cmu06g0701 Cre06g1472 Cone14ag0156 Cone15ag0168 . . . Csa02g01051 Chy05g00312 . . . . . Bpe05g00856 . . . . . . Cma08g01077 Cma17g00155 Car08g00950 Car17g00138 Cpe12g00133 Cpe17g00200 Bhi12g01604 Tan06g2399 . . . . Lcy13g0386 . . . . . . . Lsi09g01225 . . Cme05g00580
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003371 2 3 2 1 1 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 3 1 6 4 1 49
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Cpe12g00133 Cpe_Chr12 FPKM 0.0 5.448828 7.293756 0.0 4.839449 0.0 4.91042 0.0 0.0 5.988769