Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe12g00143 | ATGAGCCAACAACTGGGAGTGCTAAGCGCACTCGATCTTGCAAAAACCCAATGGTACCATTTCACGGCAATCATCATCGCCGGAATGGGTTTCTTCACCGACGCCTACGACCTCTTCTGCATCTCCATCGTCACCAAACTCCTCGGCCGAATCTATTACCATATTCAAAACTCCCCCCGACCCGGATCTCTCCCCCCCAACGTCGCCGCCGCCGTCAACGGCGTTGCCCTCTGCGGTACCCTCGCCGGCCAACTCTTCTTCGGCTGGCTCGGCGATAAACTTGGCCGGAAAAGGGTCTACGGCATTACCCTCATTCTCATGGTCCTCTGTTCCATCGCCTCTGGCCTCTCCTTCAGCAACTCCCCAAAAGCCGTTATTTCCACTCTCTGTTTCTTCCGTTTCTGGCTCGGCTTCGGAATCGGCGGCGACTACCCTCTCTCCGCCACTATAATGTCGGAATACGCCAACAAAAAAACCCGTGGCGCATTCATCGCCGCCGTCTTCGCAATGCAGGGGTTCGGAATTTTAGCCGGAGGAGTCGTTGCTTTGGTAGTCTCCGCCGCCTTCAACAACCGCTTCCCTGCACCACCCTACAGCGAAAATCCCTCCCGCCCCACAATCCCGGAGGCGGATTACGTGTGGCGAATCGTCCTAATGTTCGGCGCAATTCCGGCCGGAATAACATACTACTGGCGGATGAAAATGCCAGAGACGGCGAGATACACCGCTCTGGTAGCCCAAAACGCAAAACAAGCCGCCGCCGACATGTCAAAAGTGCTGCAAGTCCACCTCGAAGCCGAAGAACAAAAACCCACAACCGAATCAAATCAAAATCCAAACCGTTTCGGTTTATTCTCGAAGAAATTCGCGAAACGCCATGGGCTCCATTTATTGGGGACAACCACCACATGGTTTCTATTAGACATAGCGTTTTACAGCCAAAACCTCTTCCAAAAAGACATTTTCACCGCCATCGAATGGCTTCCACCGGCGGCAACAATGAGCGAATTAGAAGAATGTTTCAAAATCGCACGCGCACAGACACTAATTGCCCTGTGCGGGACGGTTCCCGGGTACTGGTTCACGGTGGTGTTCATCGATTACATAGGGAGATTCGTGATTCAATTGATGGGGTTCATAATGATGACGATTTTCATGTTTGCTCTGGCTTTTCCATACAATCATTGGAAGGAGAAGCCGCACAGAATTGGGTTTGTGGTGATGTATTCGCTGACGTTTTTCTTTGCGAATTTTGGGCCGAATTCGACGACGTTTATAGTGCCGGCGGAGATATTTCCGGCGAGGTTGAGGTCGACTTGCCATGGGATATCGGCGGCGGCGGGGAAGGCAGGGGCGATAGTGGGGGCGTTTGGGTTTTTGTATGCGGCGCAGAGTAAGGATCCGGCGTTGACGGAGCCGGGGTACCCGACGGGGATCGGCGTTAAGAATGCTTTGATTGTGTTGGGATGCATTAATTTCTTGGGAGCTTTGTTTACTCTGTTAGTGCCGGAATCCAAAGGCAAATCTCTGGAGGAGCTGACGGGGGAGAACGAAGTGGATGACGATGGGATTGGAACTCCCCCTGTCTGA | 1590 | 52.83 | MSQQLGVLSALDLAKTQWYHFTAIIIAGMGFFTDAYDLFCISIVTKLLGRIYYHIQNSPRPGSLPPNVAAAVNGVALCGTLAGQLFFGWLGDKLGRKRVYGITLILMVLCSIASGLSFSNSPKAVISTLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGVVALVVSAAFNNRFPAPPYSENPSRPTIPEADYVWRIVLMFGAIPAGITYYWRMKMPETARYTALVAQNAKQAAADMSKVLQVHLEAEEQKPTTESNQNPNRFGLFSKKFAKRHGLHLLGTTTTWFLLDIAFYSQNLFQKDIFTAIEWLPPAATMSELEECFKIARAQTLIALCGTVPGYWFTVVFIDYIGRFVIQLMGFIMMTIFMFALAFPYNHWKEKPHRIGFVVMYSLTFFFANFGPNSTTFIVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPALTEPGYPTGIGVKNALIVLGCINFLGALFTLLVPESKGKSLEELTGENEVDDDGIGTPPV | 529 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 916974 | 918563 | - | Cp4.1LG12g01500.1 | Cpe12g00143 | 478140 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe12g00143 | 529 | CDD | MFS_PhT | 24 | 506 | - | - | |
Cpe12g00143 | 529 | Gene3D | MFS general substrate transporter like domains | 273 | 525 | IPR036259 | - | |
Cpe12g00143 | 529 | Gene3D | MFS general substrate transporter like domains | 19 | 265 | IPR036259 | - | |
Cpe12g00143 | 529 | PANTHER | INORGANIC PHOSPHATE TRANSPORTER 1-4-LIKE | 1 | 523 | - | - | |
Cpe12g00143 | 529 | PANTHER | SOLUTE CARRIER FAMILY 22 MEMBER | 1 | 523 | - | - | |
Cpe12g00143 | 529 | ProSiteProfiles | Major facilitator superfamily (MFS) profile. | 23 | 507 | IPR020846 | GO:0022857 | |
Cpe12g00143 | 529 | TIGRFAM | 2A0109: phosphate:H+ symporter | 11 | 516 | IPR004738 | GO:0005315|GO:0006817|GO:0016021 | |
Cpe12g00143 | 529 | Pfam | Sugar (and other) transporter | 25 | 513 | IPR005828 | GO:0016021|GO:0022857|GO:0055085 | |
Cpe12g00143 | 529 | SUPERFAMILY | MFS general substrate transporter | 11 | 513 | IPR036259 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe03g01515 | Cpe12g00143 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe12g00143 | Cpe-Chr12:916974 | Cpe15g00078 | Cpe-Chr15:560731 | 0 | dispersed | |
Cpe06g00005 | Cpe-Chr6:15335 | Cpe12g00143 | Cpe-Chr12:916974 | 0 | transposed | |
Cpe12g00143 | Cpe-Chr12:916974 | Cpe15g00077 | Cpe-Chr15:556813 | 0 | wgd | |
Cpe12g00143 | Cpe-Chr12:916974 | Cpe03g01515 | Cpe-Chr3:11869612 | 0 | wgd | |
Cpe12g00143 | Cpe-Chr12:916974 | Cpe05g00061 | Cpe-Chr5:306885 | 0 | wgd | |
Cpe12g00143 | Cpe-Chr12:916974 | Cpe08g00332 | Cpe-Chr8:2075312 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe12g00143 | K08176 | - | csv:101212412 | 919.842 |