Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe12g00143 ATGAGCCAACAACTGGGAGTGCTAAGCGCACTCGATCTTGCAAAAACCCAATGGTACCATTTCACGGCAATCATCATCGCCGGAATGGGTTTCTTCACCGACGCCTACGACCTCTTCTGCATCTCCATCGTCACCAAACTCCTCGGCCGAATCTATTACCATATTCAAAACTCCCCCCGACCCGGATCTCTCCCCCCCAACGTCGCCGCCGCCGTCAACGGCGTTGCCCTCTGCGGTACCCTCGCCGGCCAACTCTTCTTCGGCTGGCTCGGCGATAAACTTGGCCGGAAAAGGGTCTACGGCATTACCCTCATTCTCATGGTCCTCTGTTCCATCGCCTCTGGCCTCTCCTTCAGCAACTCCCCAAAAGCCGTTATTTCCACTCTCTGTTTCTTCCGTTTCTGGCTCGGCTTCGGAATCGGCGGCGACTACCCTCTCTCCGCCACTATAATGTCGGAATACGCCAACAAAAAAACCCGTGGCGCATTCATCGCCGCCGTCTTCGCAATGCAGGGGTTCGGAATTTTAGCCGGAGGAGTCGTTGCTTTGGTAGTCTCCGCCGCCTTCAACAACCGCTTCCCTGCACCACCCTACAGCGAAAATCCCTCCCGCCCCACAATCCCGGAGGCGGATTACGTGTGGCGAATCGTCCTAATGTTCGGCGCAATTCCGGCCGGAATAACATACTACTGGCGGATGAAAATGCCAGAGACGGCGAGATACACCGCTCTGGTAGCCCAAAACGCAAAACAAGCCGCCGCCGACATGTCAAAAGTGCTGCAAGTCCACCTCGAAGCCGAAGAACAAAAACCCACAACCGAATCAAATCAAAATCCAAACCGTTTCGGTTTATTCTCGAAGAAATTCGCGAAACGCCATGGGCTCCATTTATTGGGGACAACCACCACATGGTTTCTATTAGACATAGCGTTTTACAGCCAAAACCTCTTCCAAAAAGACATTTTCACCGCCATCGAATGGCTTCCACCGGCGGCAACAATGAGCGAATTAGAAGAATGTTTCAAAATCGCACGCGCACAGACACTAATTGCCCTGTGCGGGACGGTTCCCGGGTACTGGTTCACGGTGGTGTTCATCGATTACATAGGGAGATTCGTGATTCAATTGATGGGGTTCATAATGATGACGATTTTCATGTTTGCTCTGGCTTTTCCATACAATCATTGGAAGGAGAAGCCGCACAGAATTGGGTTTGTGGTGATGTATTCGCTGACGTTTTTCTTTGCGAATTTTGGGCCGAATTCGACGACGTTTATAGTGCCGGCGGAGATATTTCCGGCGAGGTTGAGGTCGACTTGCCATGGGATATCGGCGGCGGCGGGGAAGGCAGGGGCGATAGTGGGGGCGTTTGGGTTTTTGTATGCGGCGCAGAGTAAGGATCCGGCGTTGACGGAGCCGGGGTACCCGACGGGGATCGGCGTTAAGAATGCTTTGATTGTGTTGGGATGCATTAATTTCTTGGGAGCTTTGTTTACTCTGTTAGTGCCGGAATCCAAAGGCAAATCTCTGGAGGAGCTGACGGGGGAGAACGAAGTGGATGACGATGGGATTGGAACTCCCCCTGTCTGA 1590 52.83 MSQQLGVLSALDLAKTQWYHFTAIIIAGMGFFTDAYDLFCISIVTKLLGRIYYHIQNSPRPGSLPPNVAAAVNGVALCGTLAGQLFFGWLGDKLGRKRVYGITLILMVLCSIASGLSFSNSPKAVISTLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGVVALVVSAAFNNRFPAPPYSENPSRPTIPEADYVWRIVLMFGAIPAGITYYWRMKMPETARYTALVAQNAKQAAADMSKVLQVHLEAEEQKPTTESNQNPNRFGLFSKKFAKRHGLHLLGTTTTWFLLDIAFYSQNLFQKDIFTAIEWLPPAATMSELEECFKIARAQTLIALCGTVPGYWFTVVFIDYIGRFVIQLMGFIMMTIFMFALAFPYNHWKEKPHRIGFVVMYSLTFFFANFGPNSTTFIVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPALTEPGYPTGIGVKNALIVLGCINFLGALFTLLVPESKGKSLEELTGENEVDDDGIGTPPV 529
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 916974 918563 - Cp4.1LG12g01500.1 Cpe12g00143 478140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe12g00143 529 CDD MFS_PhT 24 506 - -
Cpe12g00143 529 Gene3D MFS general substrate transporter like domains 273 525 IPR036259 -
Cpe12g00143 529 Gene3D MFS general substrate transporter like domains 19 265 IPR036259 -
Cpe12g00143 529 PANTHER INORGANIC PHOSPHATE TRANSPORTER 1-4-LIKE 1 523 - -
Cpe12g00143 529 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 1 523 - -
Cpe12g00143 529 ProSiteProfiles Major facilitator superfamily (MFS) profile. 23 507 IPR020846 GO:0022857
Cpe12g00143 529 TIGRFAM 2A0109: phosphate:H+ symporter 11 516 IPR004738 GO:0005315|GO:0006817|GO:0016021
Cpe12g00143 529 Pfam Sugar (and other) transporter 25 513 IPR005828 GO:0016021|GO:0022857|GO:0055085
Cpe12g00143 529 SUPERFAMILY MFS general substrate transporter 11 513 IPR036259 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe03g01515 Cpe12g00143 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe12g00143 Cpe-Chr12:916974 Cpe15g00078 Cpe-Chr15:560731 0 dispersed
Cpe06g00005 Cpe-Chr6:15335 Cpe12g00143 Cpe-Chr12:916974 0 transposed
Cpe12g00143 Cpe-Chr12:916974 Cpe15g00077 Cpe-Chr15:556813 0 wgd
Cpe12g00143 Cpe-Chr12:916974 Cpe03g01515 Cpe-Chr3:11869612 0 wgd
Cpe12g00143 Cpe-Chr12:916974 Cpe05g00061 Cpe-Chr5:306885 0 wgd
Cpe12g00143 Cpe-Chr12:916974 Cpe08g00332 Cpe-Chr8:2075312 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe12g00143 K08176 - csv:101212412 919.842