Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe12g00151 ATGACGGTGGAAAATCCCTGTTTTTCTGCACCAACTTTTTTTCCCCTCAAATTTTCGGTTTTTCTCAATCTGGCTAATTCCAATCCGTGGTGGGCTAGTCGGGTGGGCTTTCCGGCCACCGACCCGGTTTCTACCACCGTCGGCGGCTGCGGAACAGAGCACGACAACGATGAAGACGAGCTGAAGGAAGGTAGCGTGCTGGTTGGGAACCGCCGAACGAGAGGGCGGCCACCGGGAGCGAAAAACAAACCAAAACCCCCAATCATCGTCACGCGCGACAGTCCTCACGCGCTTCGCACGCACGTGATCGAGATCGCCGGAGGAGCCGACGTGGCGGACAGCATAAACCAATTCTCCAGCCGCCGACAACGTGGGGTTTGTGTTCTCAGCGGAAACGGCACGGTTGCCGACGTGACTCTCCGGCAATCCGCCACCGTGATCCAACTTCACGGCCTGTTCGATATTCTATCACTGAGCGGCTCTTTTCTTCCCGGTCCAGCCATCCCCTGTTCCACTAGACTCACCGTGTACCTCGCCGGTGGTCAAGGGCAGGTGGTCGGAGGGACAGTGGTGGGCCCTTTGTTGGCGGCTGGGCCTGTCATTTTGATAGCTGCTACTTTTGCTAATGCAATTTATGAGAGATTGCCTTTACAAGACGACCATGATTGCCAAGAAACAGAGGTTTCTCCGGCCGCTATAGATGGCGGAGAAGTGGAGGAGCCGCCGCCTCCGCCGCCGTATCCCCGGATGTCAACTTCAATTTACGACTTGATGACACCAAATAATGATCATGAAATGGGAATTGATAAGGTTTGGTTGGGCTCAGCTTAG 831 55.23 MTVENPCFSAPTFFPLKFSVFLNLANSNPWWASRVGFPATDPVSTTVGGCGTEHDNDEDELKEGSVLVGNRRTRGRPPGAKNKPKPPIIVTRDSPHALRTHVIEIAGGADVADSINQFSSRRQRGVCVLSGNGTVADVTLRQSATVIQLHGLFDILSLSGSFLPGPAIPCSTRLTVYLAGGQGQVVGGTVVGPLLAAGPVILIAATFANAIYERLPLQDDHDCQETEVSPAAIDGGEVEEPPPPPPYPRMSTSIYDLMTPNNDHEMGIDKVWLGSA 276
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
12 965802 968317 + Cp4.1LG12g01470.1 Cpe12g00151 478148
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cpe12g00151 276 CDD DUF296 99 169 IPR005175 -
Cpe12g00151 276 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 41 257 IPR014476 GO:0003680
Cpe12g00151 276 SUPERFAMILY AF0104/ALDC/Ptd012-like 97 219 - -
Cpe12g00151 276 Pfam Plants and Prokaryotes Conserved (PCC) domain 99 208 IPR005175 -
Cpe12g00151 276 Gene3D - 98 229 - -
Cpe12g00151 276 ProSiteProfiles PPC domain profile profile. 95 229 IPR005175 -
Cpe12g00151 276 PANTHER DNA-BINDING PROTEIN-LIKE 41 257 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe12g00151 Cpe-Chr12:965802 Cpe01g01079 Cpe-Chr1:6366461 3.11E-62 dispersed
Cpe12g00151 Cpe-Chr12:965802 Cpe03g01502 Cpe-Chr3:11828854 4.42E-68 wgd
Cpe12g00151 Cpe-Chr12:965802 Cpe08g00320 Cpe-Chr8:2023409 1.39E-67 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe12g00151 - - cpep:111806975 503.056