Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe12g00161 | ATGGCTCGGGACGGGCATGTAGTGCCGGTGGATCCACAGACGACGCTCACTGTCAAGAAGAAGAAACAATCTTCTCGGAATTGGATTCTGCTGGATTGTACGGGCCAAGGCACCGTCCTCGATGCCGACAAGTATCAAATTATGCATCGGGTTCAAATTCATGCGCGCGATCTTCGGATTCTTGACCCTTTGCTTTCTTATCCCTCAACGATTTTGGGGCGTGAGAGGGCCATTGTTCTTAATCTCGAGCATATAAAGGCGATCATTACTGCTGAAGAGGTTTTTCTTAGAGATCCGACAGATGAACAGGTCATCCCTGTGGTTGAGGAGCTTCAGAGGCGGCTGCCTCCTTCTAATGCGGTCCAGCTTCATGTTCAAGGAGATGGGAAAGCAAATCAGGGTCGGCAACACGACGGTGAAGCTGAAGAAGATGACTCGCCATTTGAATTTCGTGCGCTCGAGGTAGCTTTGGAAGCTATATGCAGTTATCTTGCTGCACGAACAACTGAGCTCGAGACTGCTGCTTATCCTGCCTTGGATGAGCTTACTGCAAAGATTAGTAGCCGAAACTTGGACAGAGTTCGTAAATTGAAGAGTGCAATGACGAGGCTGACTGCGAGGGTTCAAAAGGTGAGAGATGAGCTCGAACAATTACTGAATGACGACGATGATATGGCAGACCTTTACTTGTCAAGAAAGATGAATTCGTCTTCTCCTGTAAGTGGTTCTGGCCCTGCCATTTGGTTTCCTGCCTCTCCTACCATTGGTTCAAAGATATCAAGAGCGAGCCGAGCAAGTATGGCAACTGTACGTGGGGATGAGGATGACATCGAGGAGCTCGAAATGTTACTGGAGGCTTACTTTATGCAGATTGATGGTACATTGAACAAATTAACTACACTGCGAGAATACATTGATGACACAGAAGATTATATCAATATCCAGCTTGACAATCACCGAAATCAACTCATTCAGTTGGAGCTCTTTTTAAGCTCTGGAACTGTTTGTTTGTCTGTCTATTCTTTGGTGGGTGCAATATTCGGCATGAACATTCCATACACTTGGAATGAAAATCACGAATACATGTTTAAATGGGTTGTCATCGTTTCTGGAGTAGCTTGTGCGTTAATGTTCGTCGCAATTATTTACTACGCTCGTCTCAAAGGTTTGGTCGGATCTTGA | 1182 | 45.77 | MARDGHVVPVDPQTTLTVKKKKQSSRNWILLDCTGQGTVLDADKYQIMHRVQIHARDLRILDPLLSYPSTILGRERAIVLNLEHIKAIITAEEVFLRDPTDEQVIPVVEELQRRLPPSNAVQLHVQGDGKANQGRQHDGEAEEDDSPFEFRALEVALEAICSYLAARTTELETAAYPALDELTAKISSRNLDRVRKLKSAMTRLTARVQKVRDELEQLLNDDDDMADLYLSRKMNSSSPVSGSGPAIWFPASPTIGSKISRASRASMATVRGDEDDIEELEMLLEAYFMQIDGTLNKLTTLREYIDDTEDYINIQLDNHRNQLIQLELFLSSGTVCLSVYSLVGAIFGMNIPYTWNENHEYMFKWVVIVSGVACALMFVAIIYYARLKGLVGS | 393 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 1043975 | 1048222 | - | Cp4.1LG12g01630.1 | Cpe12g00161 | 478158 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe12g00161 | 393 | Gene3D | - | 14 | 99 | - | - | |
Cpe12g00161 | 393 | Pfam | CorA-like Mg2+ transporter protein | 273 | 380 | IPR002523 | GO:0016020|GO:0030001|GO:0046873|GO:0055085 | |
Cpe12g00161 | 393 | CDD | Mrs2_Mfm1p-like | 28 | 390 | IPR039204 | - | |
Cpe12g00161 | 393 | Gene3D | Magnesium transport protein CorA, transmembrane region | 103 | 323 | - | - | |
Cpe12g00161 | 393 | PANTHER | MAGNESIUM TRANSPORTER MRS2-I | 1 | 393 | - | - | |
Cpe12g00161 | 393 | PANTHER | RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL | 1 | 393 | IPR039204 | - | |
Cpe12g00161 | 393 | SUPERFAMILY | Magnesium transport protein CorA, transmembrane region | 329 | 381 | IPR045863 | - | |
Cpe12g00161 | 393 | Coils | Coil | 194 | 221 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe12g00161 | Cpe17g00172 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe01g00485 | Cpe-Chr1:2800338 | Cpe12g00161 | Cpe-Chr12:1043975 | 2.70E-109 | dispersed | |
Cpe02g01612 | Cpe-Chr2:13498264 | Cpe12g00161 | Cpe-Chr12:1043975 | 5.09E-118 | dispersed | |
Cpe04g00333 | Cpe-Chr4:4076562 | Cpe12g00161 | Cpe-Chr12:1043975 | 1.62E-100 | dispersed | |
Cpe07g00089 | Cpe-Chr7:430584 | Cpe12g00161 | Cpe-Chr12:1043975 | 2.24E-90 | dispersed | |
Cpe12g00161 | Cpe-Chr12:1043975 | Cpe15g00049 | Cpe-Chr15:327493 | 4.48E-176 | dispersed | |
Cpe20g00717 | Cpe-Chr20:6097753 | Cpe12g00161 | Cpe-Chr12:1043975 | 2.09E-08 | dispersed | |
Cpe12g00161 | Cpe-Chr12:1043975 | Cpe17g00172 | Cpe-Chr17:1096894 | 5.84E-111 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe12g00161 | K16075 | - | csv:101203841 | 686.797 |